data_8S9C # _model_server_result.job_id 5DW4qFuQmU6MfswN3eAO8w _model_server_result.datetime_utc '2024-10-26 02:32:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s9c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":2003}' # _entry.id 8S9C # _exptl.entry_id 8S9C _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 236.269 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description benzo[b][1]benzazepine-11-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8S9C _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8S9C _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D NAG 1 D 1 NAG D 1 NAG 4 n D NAG 2 D 2 NAG D 2 NAG 4 n E NAG 1 E 1 NAG E 1 NAG 4 n E NAG 2 E 2 NAG E 2 NAG 4 n F NAG 1 F 1 NAG F 1 NAG 4 n F NAG 2 F 2 NAG F 2 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 275 A CYS 275 1_555 A SG CYS 324 A CYS 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 315 A CYS 315 1_555 A SG CYS 330 A CYS 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 A SG CYS 895 A CYS 895 1_555 C SG CYS 55 C CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 897 A CYS 897 1_555 A SG CYS 903 A CYS 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 A SG CYS 935 A CYS 935 1_555 A SG CYS 944 A CYS 944 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 A SG CYS 1350 A CYS 1350 1_555 A SG CYS 1370 A CYS 1370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 A SG CYS 1715 A CYS 1715 1_555 A SG CYS 1730 A CYS 1730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 B SG CYS 21 B CYS 21 1_555 B SG CYS 43 B CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf9 B SG CYS 40 B CYS 40 1_555 B SG CYS 121 B CYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf10 C SG CYS 50 C CYS 50 1_555 C SG CYS 127 C CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf11 C SG CYS 72 C CYS 72 1_555 C SG CYS 75 C CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 A ND2 ASN 283 A ASN 283 1_555 G C1 NAG . A NAG 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale2 A ND2 ASN 1352 A ASN 1352 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale3 A ND2 ASN 1366 A ASN 1366 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale4 A ND2 ASN 1375 A ASN 1375 1_555 H C1 NAG . A NAG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale5 B ND2 ASN 93 B ASN 93 1_555 EA C1 NAG . B NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale6 B ND2 ASN 110 B ASN 110 1_555 FA C1 NAG . B NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale7 B ND2 ASN 114 B ASN 114 1_555 GA C1 NAG . B NAG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale8 B ND2 ASN 135 B ASN 135 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale9 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale10 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale11 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? # _chem_comp.formula 'C15 H12 N2 O' _chem_comp.formula_weight 236.269 _chem_comp.id N6W _chem_comp.mon_nstd_flag . _chem_comp.name benzo[b][1]benzazepine-11-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C11 N6W doub 327 n y C10 C09 N6W sing 328 n y C08 C07 N6W doub 329 n n C08 C09 N6W sing 330 n n C07 C05 N6W sing 331 n n C11 C12 N6W sing 332 n y C09 C14 N6W doub 333 n y C06 C05 N6W doub 334 n y C06 C01 N6W sing 335 n y C05 C04 N6W sing 336 n y C01 C02 N6W doub 337 n y C12 C13 N6W doub 338 n y C14 C13 N6W sing 339 n y C14 N15 N6W sing 340 n n C04 N15 N6W sing 341 n n C04 C03 N6W doub 342 n y N15 C16 N6W sing 343 n n C02 C03 N6W sing 344 n y C16 O17 N6W doub 345 n n C16 N18 N6W sing 346 n n C11 H1 N6W sing 347 n n C10 H2 N6W sing 348 n n C12 H3 N6W sing 349 n n C13 H4 N6W sing 350 n n C01 H5 N6W sing 351 n n C02 H6 N6W sing 352 n n C03 H7 N6W sing 353 n n C06 H8 N6W sing 354 n n C07 H9 N6W sing 355 n n C08 H10 N6W sing 356 n n N18 H11 N6W sing 357 n n N18 H12 N6W sing 358 n n # _atom_sites.entry_id 8S9C _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 NAG A 1 2001 2001 NAG NAG . H 5 NAG A 1 2002 2008 NAG NAG . I 6 N6W A 1 2003 2009 N6W N6W . J 7 P5S A 1 2004 2002 P5S P5S . K 8 Y01 A 1 2005 2003 Y01 Y01 . L 8 Y01 A 1 2006 2004 Y01 Y01 . M 8 Y01 A 1 2007 2005 Y01 Y01 . N 8 Y01 A 1 2008 2009 Y01 Y01 . O 9 LPE A 1 2009 2012 LPE LPE . P 10 PCW A 1 2010 2015 PCW PCW . Q 9 LPE A 1 2011 2017 LPE LPE . R 10 PCW A 1 2012 2018 PCW PCW . S 7 P5S A 1 2013 2019 P5S P5S . T 10 PCW A 1 2014 2020 PCW PCW . U 9 LPE A 1 2015 2021 LPE LPE . V 9 LPE A 1 2016 2022 LPE LPE . W 9 LPE A 1 2017 2023 LPE LPE . X 9 LPE A 1 2018 2025 LPE LPE . Y 9 LPE A 1 2019 2026 LPE LPE . Z 9 LPE A 1 2020 2027 LPE LPE . AA 10 PCW A 1 2021 2030 PCW PCW . BA 7 P5S A 1 2022 2031 P5S P5S . CA 8 Y01 A 1 2023 2032 Y01 Y01 . DA 9 LPE A 1 2024 2033 LPE LPE . EA 5 NAG B 1 301 301 NAG NAG . FA 5 NAG B 1 302 302 NAG NAG . GA 5 NAG B 1 303 303 NAG NAG . HA 11 HOH A 1 2101 10 HOH HOH . HA 11 HOH A 2 2102 3 HOH HOH . HA 11 HOH A 3 2103 5 HOH HOH . HA 11 HOH A 4 2104 2 HOH HOH . HA 11 HOH A 5 2105 19 HOH HOH . HA 11 HOH A 6 2106 7 HOH HOH . HA 11 HOH A 7 2107 8 HOH HOH . HA 11 HOH A 8 2108 4 HOH HOH . HA 11 HOH A 9 2109 9 HOH HOH . HA 11 HOH A 10 2110 14 HOH HOH . HA 11 HOH A 11 2111 16 HOH HOH . HA 11 HOH A 12 2112 20 HOH HOH . HA 11 HOH A 13 2113 17 HOH HOH . HA 11 HOH A 14 2114 1 HOH HOH . IA 11 HOH B 1 401 15 HOH HOH . IA 11 HOH B 2 402 6 HOH HOH . IA 11 HOH B 3 403 11 HOH HOH . IA 11 HOH B 4 404 12 HOH HOH . IA 11 HOH B 5 405 13 HOH HOH . IA 11 HOH B 6 406 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 N6W . . . I 6 178.061 178.515 159.246 1 86.91 ? C14 N6W 2003 A 1 HETATM 2 C C11 N6W . . . I 6 180.517 178.438 157.979 1 82.89 ? C11 N6W 2003 A 1 HETATM 3 C C10 N6W . . . I 6 180.339 177.772 159.171 1 84.53 ? C10 N6W 2003 A 1 HETATM 4 C C12 N6W . . . I 6 179.47 179.143 157.419 1 85.97 ? C12 N6W 2003 A 1 HETATM 5 C C13 N6W . . . I 6 178.244 179.181 158.044 1 88.91 ? C13 N6W 2003 A 1 HETATM 6 C C01 N6W . . . I 6 176.498 180.404 163.664 1 82.14 ? C01 N6W 2003 A 1 HETATM 7 C C02 N6W . . . I 6 175.792 180.899 162.586 1 85.18 ? C02 N6W 2003 A 1 HETATM 8 C C03 N6W . . . I 6 175.888 180.295 161.351 1 84.4 ? C03 N6W 2003 A 1 HETATM 9 C C04 N6W . . . I 6 176.693 179.18 161.185 1 84.72 ? C04 N6W 2003 A 1 HETATM 10 C C05 N6W . . . I 6 177.417 178.656 162.262 1 84.3 ? C05 N6W 2003 A 1 HETATM 11 C C06 N6W . . . I 6 177.297 179.295 163.505 1 85.54 ? C06 N6W 2003 A 1 HETATM 12 C C07 N6W . . . I 6 178.279 177.48 162.154 1 80.58 ? C07 N6W 2003 A 1 HETATM 13 C C08 N6W . . . I 6 178.95 177.074 161.091 1 79.91 ? C08 N6W 2003 A 1 HETATM 14 C C09 N6W . . . I 6 179.103 177.791 159.829 1 83.74 ? C09 N6W 2003 A 1 HETATM 15 C C16 N6W . . . I 6 175.665 178.026 159.277 1 87.73 ? C16 N6W 2003 A 1 HETATM 16 N N15 N6W . . . I 6 176.775 178.553 159.891 1 88.1 ? N15 N6W 2003 A 1 HETATM 17 N N18 N6W . . . I 6 174.475 178.474 159.674 1 87.96 ? N18 N6W 2003 A 1 HETATM 18 O O17 N6W . . . I 6 175.786 177.169 158.382 1 83.02 ? O17 N6W 2003 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 18 #