data_8S9Q # _model_server_result.job_id GgPnuLfCAAGRdRN4jvrNgg _model_server_result.datetime_utc '2024-11-15 21:31:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8s9q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8S9Q # _exptl.entry_id 8S9Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 495.013 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-tert-butoxy{4-(4-chlorophenyl)-2,3,6-trimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8S9Q _cell.length_a 71.991 _cell.length_b 71.991 _cell.length_c 65.92 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8S9Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -43.946667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H31 Cl N4 O3' _chem_comp.formula_weight 495.013 _chem_comp.id WBV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-tert-butoxy{4-(4-chlorophenyl)-2,3,6-trimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Pirmitegravir # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAI CAU WBV doub 376 n n NAR NBG WBV sing 377 n y NAR CAO WBV doub 378 n y CAD NBG WBV sing 379 n n OAH CAU WBV sing 380 n n CAL CAN WBV doub 381 n y CAL CAV WBV sing 382 n y CAU CBF WBV sing 383 n n CAN CBA WBV sing 384 n y NBG CAP WBV sing 385 n y CAO CAX WBV sing 386 n y CLA CAV WBV sing 387 n n CAV CAK WBV doub 388 n y CBA CBB WBV sing 389 n n CBA CAM WBV doub 390 n y CBF CBC WBV sing 391 n n CBF OAT WBV sing 392 n n CAP CAX WBV doub 393 n y CAX CAQ WBV sing 394 n n CBB CBC WBV doub 395 n y CBB CBE WBV sing 396 n y CBC CAW WBV sing 397 n y CAB CAY WBV sing 398 n n CBE CAY WBV sing 399 n y CBE CBD WBV doub 400 n y CAY CAZ WBV doub 401 n y CAW CAA WBV sing 402 n n CAW NAS WBV doub 403 n y CAK CAM WBV sing 404 n y CBD NAS WBV sing 405 n y CBD NBH WBV sing 406 n y CAZ CAC WBV sing 407 n n CAZ NBH WBV sing 408 n y OAT CBI WBV sing 409 n n NBH CAQ WBV sing 410 n n CAF CBI WBV sing 411 n n CBI CAG WBV sing 412 n n CBI CAE WBV sing 413 n n CAA H1 WBV sing 414 n n CAA H2 WBV sing 415 n n CAA H3 WBV sing 416 n n CAB H4 WBV sing 417 n n CAB H5 WBV sing 418 n n CAB H6 WBV sing 419 n n CAC H7 WBV sing 420 n n CAC H8 WBV sing 421 n n CAC H9 WBV sing 422 n n CAD H10 WBV sing 423 n n CAD H11 WBV sing 424 n n CAD H12 WBV sing 425 n n CAE H13 WBV sing 426 n n CAE H14 WBV sing 427 n n CAE H15 WBV sing 428 n n CAF H16 WBV sing 429 n n CAF H17 WBV sing 430 n n CAF H18 WBV sing 431 n n CAG H19 WBV sing 432 n n CAG H20 WBV sing 433 n n CAG H21 WBV sing 434 n n CAK H22 WBV sing 435 n n CAL H23 WBV sing 436 n n CAM H24 WBV sing 437 n n CAN H25 WBV sing 438 n n CAO H26 WBV sing 439 n n CAP H27 WBV sing 440 n n CAQ H28 WBV sing 441 n n CAQ H29 WBV sing 442 n n CBF H30 WBV sing 443 n n OAH H31 WBV sing 444 n n # _atom_sites.entry_id 8S9Q _atom_sites.fract_transf_matrix[1][1] 0.013891 _atom_sites.fract_transf_matrix[1][2] 0.00802 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01517 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WBV A 1 301 301 WBV LIG . C 3 HOH A 1 401 3 HOH HOH . C 3 HOH A 2 402 23 HOH HOH . C 3 HOH A 3 403 39 HOH HOH . C 3 HOH A 4 404 4 HOH HOH . C 3 HOH A 5 405 17 HOH HOH . C 3 HOH A 6 406 1 HOH HOH . C 3 HOH A 7 407 5 HOH HOH . C 3 HOH A 8 408 27 HOH HOH . C 3 HOH A 9 409 19 HOH HOH . C 3 HOH A 10 410 12 HOH HOH . C 3 HOH A 11 411 43 HOH HOH . C 3 HOH A 12 412 16 HOH HOH . C 3 HOH A 13 413 11 HOH HOH . C 3 HOH A 14 414 9 HOH HOH . C 3 HOH A 15 415 28 HOH HOH . C 3 HOH A 16 416 7 HOH HOH . C 3 HOH A 17 417 24 HOH HOH . C 3 HOH A 18 418 26 HOH HOH . C 3 HOH A 19 419 21 HOH HOH . C 3 HOH A 20 420 18 HOH HOH . C 3 HOH A 21 421 15 HOH HOH . C 3 HOH A 22 422 38 HOH HOH . C 3 HOH A 23 423 10 HOH HOH . C 3 HOH A 24 424 30 HOH HOH . C 3 HOH A 25 425 67 HOH HOH . C 3 HOH A 26 426 14 HOH HOH . C 3 HOH A 27 427 29 HOH HOH . C 3 HOH A 28 428 52 HOH HOH . C 3 HOH A 29 429 35 HOH HOH . C 3 HOH A 30 430 32 HOH HOH . C 3 HOH A 31 431 34 HOH HOH . C 3 HOH A 32 432 37 HOH HOH . C 3 HOH A 33 433 45 HOH HOH . C 3 HOH A 34 434 41 HOH HOH . C 3 HOH A 35 435 2 HOH HOH . C 3 HOH A 36 436 66 HOH HOH . C 3 HOH A 37 437 51 HOH HOH . C 3 HOH A 38 438 33 HOH HOH . C 3 HOH A 39 439 64 HOH HOH . C 3 HOH A 40 440 31 HOH HOH . C 3 HOH A 41 441 40 HOH HOH . C 3 HOH A 42 442 53 HOH HOH . C 3 HOH A 43 443 65 HOH HOH . C 3 HOH A 44 444 44 HOH HOH . C 3 HOH A 45 445 59 HOH HOH . C 3 HOH A 46 446 20 HOH HOH . C 3 HOH A 47 447 36 HOH HOH . C 3 HOH A 48 448 61 HOH HOH . C 3 HOH A 49 449 6 HOH HOH . C 3 HOH A 50 450 8 HOH HOH . C 3 HOH A 51 451 63 HOH HOH . C 3 HOH A 52 452 13 HOH HOH . C 3 HOH A 53 453 58 HOH HOH . C 3 HOH A 54 454 42 HOH HOH . C 3 HOH A 55 455 49 HOH HOH . C 3 HOH A 56 456 22 HOH HOH . C 3 HOH A 57 457 25 HOH HOH . C 3 HOH A 58 458 60 HOH HOH . C 3 HOH A 59 459 48 HOH HOH . C 3 HOH A 60 460 54 HOH HOH . C 3 HOH A 61 461 68 HOH HOH . C 3 HOH A 62 462 62 HOH HOH . C 3 HOH A 63 463 50 HOH HOH . C 3 HOH A 64 464 46 HOH HOH . C 3 HOH A 65 465 47 HOH HOH . C 3 HOH A 66 466 56 HOH HOH . C 3 HOH A 67 467 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA WBV . . . B 2 13.739 -48.848 -15.777 0.91 34.69 ? CAA WBV 301 A 1 HETATM 2 C CAB WBV . . . B 2 6.631 -47.634 -16.043 0.91 40.11 ? CAB WBV 301 A 1 HETATM 3 C CAC WBV . . . B 2 6.363 -50.871 -16.859 0.91 49.88 ? CAC WBV 301 A 1 HETATM 4 C CAD WBV . . . B 2 8.561 -56.004 -13.444 0.91 79.74 ? CAD WBV 301 A 1 HETATM 5 C CAE WBV . . . B 2 12.419 -46.347 -18.394 0.91 30.06 ? CAE WBV 301 A 1 HETATM 6 C CAF WBV . . . B 2 14.649 -45.052 -18.086 0.91 32.18 ? CAF WBV 301 A 1 HETATM 7 C CAG WBV . . . B 2 12.423 -43.974 -17.301 0.91 29.59 ? CAG WBV 301 A 1 HETATM 8 C CAK WBV . . . B 2 8.693 -43.965 -13.795 0.91 32.39 ? CAK WBV 301 A 1 HETATM 9 C CAL WBV . . . B 2 8.056 -43.828 -16.231 0.91 29.6 ? CAL WBV 301 A 1 HETATM 10 C CAM WBV . . . B 2 9.348 -45.24 -14.038 0.91 31.69 ? CAM WBV 301 A 1 HETATM 11 C CAN WBV . . . B 2 8.71 -45.1 -16.475 0.91 29.99 ? CAN WBV 301 A 1 HETATM 12 C CAO WBV . . . B 2 9.353 -52.427 -14.183 0.91 55.37 ? CAO WBV 301 A 1 HETATM 13 C CAP WBV . . . B 2 8.855 -54.374 -15.415 0.91 56.82 ? CAP WBV 301 A 1 HETATM 14 C CAQ WBV . . . B 2 9.32 -52.086 -16.921 0.91 44.16 ? CAQ WBV 301 A 1 HETATM 15 C CAU WBV . . . B 2 12.937 -46.328 -13.886 0.91 33.36 ? CAU WBV 301 A 1 HETATM 16 C CAV WBV . . . B 2 8.049 -43.265 -14.892 0.91 25.28 ? CAV WBV 301 A 1 HETATM 17 C CAW WBV . . . B 2 12.15 -48.646 -15.853 0.91 31.98 ? CAW WBV 301 A 1 HETATM 18 C CAX WBV . . . B 2 9.181 -52.934 -15.564 0.91 48.95 ? CAX WBV 301 A 1 HETATM 19 C CAY WBV . . . B 2 7.839 -48.675 -16.199 0.91 37.28 ? CAY WBV 301 A 1 HETATM 20 C CAZ WBV . . . B 2 7.727 -50.087 -16.557 0.91 41.48 ? CAZ WBV 301 A 1 HETATM 21 C CBA WBV . . . B 2 9.352 -45.805 -15.378 0.91 30.75 ? CBA WBV 301 A 1 HETATM 22 C CBB WBV . . . B 2 10.077 -47.203 -15.66 0.91 28.85 ? CBB WBV 301 A 1 HETATM 23 C CBC WBV . . . B 2 11.539 -47.339 -15.582 0.91 29.51 ? CBC WBV 301 A 1 HETATM 24 C CBD WBV . . . B 2 9.962 -49.641 -16.271 0.91 36.12 ? CBD WBV 301 A 1 HETATM 25 C CBE WBV . . . B 2 9.279 -48.394 -16.019 0.91 32.41 ? CBE WBV 301 A 1 HETATM 26 C CBF WBV . . . B 2 12.414 -46.14 -15.219 0.91 29.97 ? CBF WBV 301 A 1 HETATM 27 C CBI WBV . . . B 2 13.223 -45.362 -17.419 0.91 29.69 ? CBI WBV 301 A 1 HETATM 28 N NAR WBV . . . B 2 9.144 -53.487 -13.329 0.91 55.7 ? NAR WBV 301 A 1 HETATM 29 N NAS WBV . . . B 2 11.362 -49.741 -16.185 0.91 35.8 ? NAS WBV 301 A 1 HETATM 30 N NBG WBV . . . B 2 8.85 -54.637 -14.063 0.91 59.88 ? NBG WBV 301 A 1 HETATM 31 N NBH WBV . . . B 2 9.002 -50.625 -16.593 0.91 39.87 ? NBH WBV 301 A 1 HETATM 32 O OAH WBV . . . B 2 14.135 -45.863 -13.575 0.91 31.98 ? OAH WBV 301 A 1 HETATM 33 O OAI WBV . . . B 2 12.217 -46.961 -12.98 0.91 32.67 ? OAI WBV 301 A 1 HETATM 34 O OAT WBV . . . B 2 13.463 -46.004 -16.099 0.91 29.47 ? OAT WBV 301 A 1 HETATM 35 CL CLA WBV . . . B 2 7.204 -41.628 -14.587 0.91 38.56 ? CLA WBV 301 A 1 HETATM 36 H H1 WBV . . . B 2 14.241 -48.216 -16.582 0.91 41.95 ? H1 WBV 301 A 1 HETATM 37 H H2 WBV . . . B 2 14.114 -48.525 -14.75 0.91 41.95 ? H2 WBV 301 A 1 HETATM 38 H H3 WBV . . . B 2 13.99 -49.947 -15.945 0.91 41.95 ? H3 WBV 301 A 1 HETATM 39 H H4 WBV . . . B 2 6.775 -47.023 -15.09 0.91 48.44 ? H4 WBV 301 A 1 HETATM 40 H H5 WBV . . . B 2 5.643 -48.203 -15.984 0.91 48.44 ? H5 WBV 301 A 1 HETATM 41 H H6 WBV . . . B 2 6.613 -46.934 -16.944 0.91 48.44 ? H6 WBV 301 A 1 HETATM 42 H H7 WBV . . . B 2 5.547 -50.498 -16.158 0.91 60.17 ? H7 WBV 301 A 1 HETATM 43 H H8 WBV . . . B 2 6.522 -51.987 -16.696 0.91 60.17 ? H8 WBV 301 A 1 HETATM 44 H H9 WBV . . . B 2 6.05 -50.687 -17.939 0.91 60.17 ? H9 WBV 301 A 1 HETATM 45 H H10 WBV . . . B 2 7.524 -56.356 -13.768 0.91 96 ? H10 WBV 301 A 1 HETATM 46 H H11 WBV . . . B 2 9.345 -56.756 -13.797 0.91 96 ? H11 WBV 301 A 1 HETATM 47 H H12 WBV . . . B 2 8.597 -55.922 -12.306 0.91 96 ? H12 WBV 301 A 1 HETATM 48 H H13 WBV . . . B 2 12.821 -47.407 -18.278 0.91 36.38 ? H13 WBV 301 A 1 HETATM 49 H H14 WBV . . . B 2 11.312 -46.328 -18.123 0.91 36.38 ? H14 WBV 301 A 1 HETATM 50 H H15 WBV . . . B 2 12.553 -46.005 -19.473 0.91 36.38 ? H15 WBV 301 A 1 HETATM 51 H H16 WBV . . . B 2 15.116 -44.143 -17.58 0.91 38.92 ? H16 WBV 301 A 1 HETATM 52 H H17 WBV . . . B 2 14.511 -44.839 -19.198 0.91 38.92 ? H17 WBV 301 A 1 HETATM 53 H H18 WBV . . . B 2 15.335 -45.955 -17.954 0.91 38.92 ? H18 WBV 301 A 1 HETATM 54 H H19 WBV . . . B 2 11.303 -44.184 -17.252 0.91 35.82 ? H19 WBV 301 A 1 HETATM 55 H H20 WBV . . . B 2 12.749 -43.427 -16.355 0.91 35.82 ? H20 WBV 301 A 1 HETATM 56 H H21 WBV . . . B 2 12.649 -43.327 -18.212 0.91 35.82 ? H21 WBV 301 A 1 HETATM 57 H H22 WBV . . . B 2 8.686 -43.518 -12.751 0.91 39.18 ? H22 WBV 301 A 1 HETATM 58 H H23 WBV . . . B 2 7.551 -43.274 -17.084 0.91 35.84 ? H23 WBV 301 A 1 HETATM 59 H H24 WBV . . . B 2 9.855 -45.792 -13.185 0.91 38.34 ? H24 WBV 301 A 1 HETATM 60 H H25 WBV . . . B 2 8.721 -45.543 -17.52 0.91 36.3 ? H25 WBV 301 A 1 HETATM 61 H H26 WBV . . . B 2 9.61 -51.359 -13.883 0.91 66.76 ? H26 WBV 301 A 1 HETATM 62 H H27 WBV . . . B 2 8.65 -55.115 -16.254 0.91 68.5 ? H27 WBV 301 A 1 HETATM 63 H H28 WBV . . . B 2 8.584 -52.477 -17.699 0.91 53.31 ? H28 WBV 301 A 1 HETATM 64 H H29 WBV . . . B 2 10.382 -52.171 -17.325 0.91 53.31 ? H29 WBV 301 A 1 HETATM 65 H H30 WBV . . . B 2 11.735 -45.14 -15.279 0.91 36.28 ? H30 WBV 301 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 65 #