data_8S9R
#
_model_server_result.job_id            Q-9sAUv-o93gO5medGtjOQ 
_model_server_result.datetime_utc      '2024-12-21 17:10:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8s9r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":403}' 
#
_entry.id    8S9R 
#
_exptl.entry_id    8S9R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8S9R 
_cell.length_a            129.146 
_cell.length_b            129.146 
_cell.length_c            251.791 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8S9R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        91 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_554 y,x,-z-1/4 0 1 0 1 0 0 0 0 -1 0 0 -62.94775 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 69 A ASP 64 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
metalc ? metalc2 A OD2 ASP 69 A ASP 64 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc3 A NE2 HIS 89 A HIS 84 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc4 A NE2 HIS 95 A HIS 90 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc5 A OD2 ASP 241 A ASP 236 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? 
metalc ? metalc6 A O GLY 288 A GLY 283 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.943 ? 
metalc ? metalc7 A OD2 ASP 353 A ASP 348 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? 
metalc ? metalc8 A OD1 ASP 356 A ASP 351 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? 
metalc ? metalc9 A OD2 ASP 356 A ASP 351 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? 
metalc ? metalc10 A OD2 ASP 361 A ASP 356 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc11 A OD2 ASP 364 A ASP 359 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? 
metalc ? metalc12 E CA CA . A CA 403 1_555 J O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? 
metalc ? metalc13 B OD1 ASP 69 B ASP 64 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? 
metalc ? metalc14 B OD2 ASP 69 B ASP 64 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc15 B NE2 HIS 89 B HIS 84 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
metalc ? metalc16 B NE2 HIS 95 B HIS 90 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc17 B OD2 ASP 241 B ASP 236 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? 
metalc ? metalc18 B O GLY 288 B GLY 283 1_555 I CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc19 B OD2 ASP 353 B ASP 348 1_555 I CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? 
metalc ? metalc20 B OD1 ASP 356 B ASP 351 1_555 I CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? 
metalc ? metalc21 B OD2 ASP 356 B ASP 351 1_555 I CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? 
metalc ? metalc22 B OD2 ASP 361 B ASP 356 1_555 I CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? 
metalc ? metalc23 B OD2 ASP 364 B ASP 359 1_555 I CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc24 I CA CA . B CA 404 1_555 K O HOH . B HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8S9R 
_atom_sites.fract_transf_matrix[1][1]    0.007743 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007743 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003972 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 401 2 ZN ZN . 
D 3 PO4 A 1 402 1 PO4 PO4 . 
E 4 CA A 1 403 2 CA CA . 
F 2 ZN B 1 401 1 ZN ZN . 
G 3 PO4 B 1 402 2 PO4 PO4 . 
H 3 PO4 B 1 403 5 PO4 PO4 . 
I 4 CA B 1 404 1 CA CA . 
J 5 HOH A 1 501 27 HOH HOH . 
J 5 HOH A 2 502 79 HOH HOH . 
J 5 HOH A 3 503 47 HOH HOH . 
J 5 HOH A 4 504 124 HOH HOH . 
J 5 HOH A 5 505 114 HOH HOH . 
J 5 HOH A 6 506 88 HOH HOH . 
J 5 HOH A 7 507 56 HOH HOH . 
J 5 HOH A 8 508 8 HOH HOH . 
J 5 HOH A 9 509 63 HOH HOH . 
J 5 HOH A 10 510 121 HOH HOH . 
J 5 HOH A 11 511 68 HOH HOH . 
J 5 HOH A 12 512 106 HOH HOH . 
J 5 HOH A 13 513 61 HOH HOH . 
J 5 HOH A 14 514 118 HOH HOH . 
J 5 HOH A 15 515 4 HOH HOH . 
J 5 HOH A 16 516 46 HOH HOH . 
J 5 HOH A 17 517 102 HOH HOH . 
J 5 HOH A 18 518 51 HOH HOH . 
J 5 HOH A 19 519 29 HOH HOH . 
J 5 HOH A 20 520 70 HOH HOH . 
J 5 HOH A 21 521 13 HOH HOH . 
J 5 HOH A 22 522 67 HOH HOH . 
J 5 HOH A 23 523 15 HOH HOH . 
J 5 HOH A 24 524 43 HOH HOH . 
J 5 HOH A 25 525 32 HOH HOH . 
J 5 HOH A 26 526 35 HOH HOH . 
J 5 HOH A 27 527 122 HOH HOH . 
J 5 HOH A 28 528 45 HOH HOH . 
J 5 HOH A 29 529 3 HOH HOH . 
J 5 HOH A 30 530 21 HOH HOH . 
J 5 HOH A 31 531 58 HOH HOH . 
J 5 HOH A 32 532 120 HOH HOH . 
J 5 HOH A 33 533 30 HOH HOH . 
J 5 HOH A 34 534 75 HOH HOH . 
J 5 HOH A 35 535 11 HOH HOH . 
J 5 HOH A 36 536 17 HOH HOH . 
J 5 HOH A 37 537 101 HOH HOH . 
J 5 HOH A 38 538 5 HOH HOH . 
J 5 HOH A 39 539 7 HOH HOH . 
J 5 HOH A 40 540 69 HOH HOH . 
J 5 HOH A 41 541 2 HOH HOH . 
J 5 HOH A 42 542 62 HOH HOH . 
J 5 HOH A 43 543 33 HOH HOH . 
J 5 HOH A 44 544 26 HOH HOH . 
J 5 HOH A 45 545 20 HOH HOH . 
J 5 HOH A 46 546 28 HOH HOH . 
J 5 HOH A 47 547 55 HOH HOH . 
J 5 HOH A 48 548 84 HOH HOH . 
J 5 HOH A 49 549 116 HOH HOH . 
J 5 HOH A 50 550 65 HOH HOH . 
J 5 HOH A 51 551 64 HOH HOH . 
J 5 HOH A 52 552 19 HOH HOH . 
J 5 HOH A 53 553 16 HOH HOH . 
J 5 HOH A 54 554 73 HOH HOH . 
J 5 HOH A 55 555 25 HOH HOH . 
J 5 HOH A 56 556 10 HOH HOH . 
J 5 HOH A 57 557 123 HOH HOH . 
J 5 HOH A 58 558 34 HOH HOH . 
J 5 HOH A 59 559 71 HOH HOH . 
J 5 HOH A 60 560 53 HOH HOH . 
J 5 HOH A 61 561 50 HOH HOH . 
J 5 HOH A 62 562 42 HOH HOH . 
J 5 HOH A 63 563 83 HOH HOH . 
J 5 HOH A 64 564 90 HOH HOH . 
J 5 HOH A 65 565 31 HOH HOH . 
J 5 HOH A 66 566 40 HOH HOH . 
J 5 HOH A 67 567 97 HOH HOH . 
J 5 HOH A 68 568 49 HOH HOH . 
J 5 HOH A 69 569 107 HOH HOH . 
J 5 HOH A 70 570 119 HOH HOH . 
J 5 HOH A 71 571 103 HOH HOH . 
J 5 HOH A 72 572 78 HOH HOH . 
J 5 HOH A 73 573 87 HOH HOH . 
J 5 HOH A 74 574 89 HOH HOH . 
J 5 HOH A 75 575 44 HOH HOH . 
J 5 HOH A 76 576 66 HOH HOH . 
J 5 HOH A 77 577 96 HOH HOH . 
J 5 HOH A 78 578 92 HOH HOH . 
K 5 HOH B 1 501 54 HOH HOH . 
K 5 HOH B 2 502 38 HOH HOH . 
K 5 HOH B 3 503 24 HOH HOH . 
K 5 HOH B 4 504 113 HOH HOH . 
K 5 HOH B 5 505 14 HOH HOH . 
K 5 HOH B 6 506 93 HOH HOH . 
K 5 HOH B 7 507 48 HOH HOH . 
K 5 HOH B 8 508 9 HOH HOH . 
K 5 HOH B 9 509 18 HOH HOH . 
K 5 HOH B 10 510 100 HOH HOH . 
K 5 HOH B 11 511 6 HOH HOH . 
K 5 HOH B 12 512 52 HOH HOH . 
K 5 HOH B 13 513 72 HOH HOH . 
K 5 HOH B 14 514 91 HOH HOH . 
K 5 HOH B 15 515 37 HOH HOH . 
K 5 HOH B 16 516 23 HOH HOH . 
K 5 HOH B 17 517 117 HOH HOH . 
K 5 HOH B 18 518 77 HOH HOH . 
K 5 HOH B 19 519 82 HOH HOH . 
K 5 HOH B 20 520 80 HOH HOH . 
K 5 HOH B 21 521 41 HOH HOH . 
K 5 HOH B 22 522 105 HOH HOH . 
K 5 HOH B 23 523 59 HOH HOH . 
K 5 HOH B 24 524 99 HOH HOH . 
K 5 HOH B 25 525 81 HOH HOH . 
K 5 HOH B 26 526 12 HOH HOH . 
K 5 HOH B 27 527 74 HOH HOH . 
K 5 HOH B 28 528 60 HOH HOH . 
K 5 HOH B 29 529 95 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -28.725 
_atom_site.Cartn_y               -39.146 
_atom_site.Cartn_z               -7.292 
_atom_site.occupancy             0.49 
_atom_site.B_iso_or_equiv        68.5 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           403 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           341 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#