data_8SBR
#
_model_server_result.job_id            nKDuchYIoLxfCniD5JQH7Q 
_model_server_result.datetime_utc      '2024-11-05 06:51:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8sbr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":601}' 
#
_entry.id    8SBR 
#
_exptl.entry_id    8SBR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              104.061 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MALONIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8SBR 
_cell.length_a            163.324 
_cell.length_b            106.782 
_cell.length_c            132.825 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SBR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    'P 2 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
_chem_comp.formula           'C3 H4 O4' 
_chem_comp.formula_weight    104.061 
_chem_comp.id                MLA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MALONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'DICARBOXYLIC ACID C3;PROPANEDIOLIC ACID;METHANEDICARBOXYLIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1A MLA sing 283 n n 
C1 O1B MLA doub 284 n n 
C1 C2 MLA sing 285 n n 
O1A H1A MLA sing 286 n n 
C2 C3 MLA sing 287 n n 
C2 HC21 MLA sing 288 n n 
C2 HC22 MLA sing 289 n n 
C3 O3A MLA doub 290 n n 
C3 O3B MLA sing 291 n n 
O3B H3B MLA sing 292 n n 
#
_atom_sites.entry_id                     8SBR 
_atom_sites.fract_transf_matrix[1][1]    0.006123 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009365 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007529 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MLA A 1 601 601 MLA MLA . 
D 3 CTP A 1 602 701 CTP CTP . 
E 3 CTP A 1 603 701 CTP CTP . 
F 2 MLA B 1 601 601 MLA MLA . 
G 4 HOH A 1 701 106 HOH HOH . 
G 4 HOH A 2 702 53 HOH HOH . 
G 4 HOH A 3 703 20 HOH HOH . 
G 4 HOH A 4 704 1 HOH HOH . 
G 4 HOH A 5 705 129 HOH HOH . 
G 4 HOH A 6 706 24 HOH HOH . 
G 4 HOH A 7 707 81 HOH HOH . 
G 4 HOH A 8 708 3 HOH HOH . 
G 4 HOH A 9 709 39 HOH HOH . 
G 4 HOH A 10 710 43 HOH HOH . 
G 4 HOH A 11 711 25 HOH HOH . 
G 4 HOH A 12 712 21 HOH HOH . 
G 4 HOH A 13 713 6 HOH HOH . 
G 4 HOH A 14 714 51 HOH HOH . 
G 4 HOH A 15 715 31 HOH HOH . 
G 4 HOH A 16 716 37 HOH HOH . 
G 4 HOH A 17 717 103 HOH HOH . 
G 4 HOH A 18 718 74 HOH HOH . 
G 4 HOH A 19 719 41 HOH HOH . 
G 4 HOH A 20 720 36 HOH HOH . 
G 4 HOH A 21 721 9 HOH HOH . 
G 4 HOH A 22 722 52 HOH HOH . 
G 4 HOH A 23 723 15 HOH HOH . 
G 4 HOH A 24 724 125 HOH HOH . 
G 4 HOH A 25 725 58 HOH HOH . 
G 4 HOH A 26 726 105 HOH HOH . 
G 4 HOH A 27 727 91 HOH HOH . 
G 4 HOH A 28 728 17 HOH HOH . 
G 4 HOH A 29 729 99 HOH HOH . 
G 4 HOH A 30 730 47 HOH HOH . 
G 4 HOH A 31 731 135 HOH HOH . 
G 4 HOH A 32 732 22 HOH HOH . 
G 4 HOH A 33 733 38 HOH HOH . 
G 4 HOH A 34 734 18 HOH HOH . 
G 4 HOH A 35 735 13 HOH HOH . 
G 4 HOH A 36 736 50 HOH HOH . 
G 4 HOH A 37 737 56 HOH HOH . 
G 4 HOH A 38 738 19 HOH HOH . 
G 4 HOH A 39 739 108 HOH HOH . 
G 4 HOH A 40 740 32 HOH HOH . 
G 4 HOH A 41 741 86 HOH HOH . 
G 4 HOH A 42 742 27 HOH HOH . 
G 4 HOH A 43 743 82 HOH HOH . 
G 4 HOH A 44 744 70 HOH HOH . 
G 4 HOH A 45 745 110 HOH HOH . 
G 4 HOH A 46 746 40 HOH HOH . 
G 4 HOH A 47 747 102 HOH HOH . 
G 4 HOH A 48 748 83 HOH HOH . 
G 4 HOH A 49 749 122 HOH HOH . 
G 4 HOH A 50 750 23 HOH HOH . 
G 4 HOH A 51 751 112 HOH HOH . 
G 4 HOH A 52 752 14 HOH HOH . 
G 4 HOH A 53 753 116 HOH HOH . 
G 4 HOH A 54 754 97 HOH HOH . 
G 4 HOH A 55 755 72 HOH HOH . 
G 4 HOH A 56 756 101 HOH HOH . 
G 4 HOH A 57 757 121 HOH HOH . 
G 4 HOH A 58 758 59 HOH HOH . 
G 4 HOH A 59 759 132 HOH HOH . 
G 4 HOH A 60 760 111 HOH HOH . 
G 4 HOH A 61 761 95 HOH HOH . 
G 4 HOH A 62 762 79 HOH HOH . 
G 4 HOH A 63 763 100 HOH HOH . 
G 4 HOH A 64 764 138 HOH HOH . 
G 4 HOH A 65 765 134 HOH HOH . 
G 4 HOH A 66 766 71 HOH HOH . 
G 4 HOH A 67 767 11 HOH HOH . 
G 4 HOH A 68 768 124 HOH HOH . 
G 4 HOH A 69 769 93 HOH HOH . 
G 4 HOH A 70 770 114 HOH HOH . 
G 4 HOH A 71 771 45 HOH HOH . 
G 4 HOH A 72 772 94 HOH HOH . 
H 4 HOH B 1 701 12 HOH HOH . 
H 4 HOH B 2 702 78 HOH HOH . 
H 4 HOH B 3 703 2 HOH HOH . 
H 4 HOH B 4 704 109 HOH HOH . 
H 4 HOH B 5 705 126 HOH HOH . 
H 4 HOH B 6 706 29 HOH HOH . 
H 4 HOH B 7 707 88 HOH HOH . 
H 4 HOH B 8 708 4 HOH HOH . 
H 4 HOH B 9 709 55 HOH HOH . 
H 4 HOH B 10 710 54 HOH HOH . 
H 4 HOH B 11 711 85 HOH HOH . 
H 4 HOH B 12 712 127 HOH HOH . 
H 4 HOH B 13 713 73 HOH HOH . 
H 4 HOH B 14 714 35 HOH HOH . 
H 4 HOH B 15 715 92 HOH HOH . 
H 4 HOH B 16 716 5 HOH HOH . 
H 4 HOH B 17 717 8 HOH HOH . 
H 4 HOH B 18 718 104 HOH HOH . 
H 4 HOH B 19 719 7 HOH HOH . 
H 4 HOH B 20 720 96 HOH HOH . 
H 4 HOH B 21 721 44 HOH HOH . 
H 4 HOH B 22 722 28 HOH HOH . 
H 4 HOH B 23 723 65 HOH HOH . 
H 4 HOH B 24 724 34 HOH HOH . 
H 4 HOH B 25 725 48 HOH HOH . 
H 4 HOH B 26 726 76 HOH HOH . 
H 4 HOH B 27 727 119 HOH HOH . 
H 4 HOH B 28 728 33 HOH HOH . 
H 4 HOH B 29 729 61 HOH HOH . 
H 4 HOH B 30 730 46 HOH HOH . 
H 4 HOH B 31 731 42 HOH HOH . 
H 4 HOH B 32 732 64 HOH HOH . 
H 4 HOH B 33 733 84 HOH HOH . 
H 4 HOH B 34 734 26 HOH HOH . 
H 4 HOH B 35 735 118 HOH HOH . 
H 4 HOH B 36 736 107 HOH HOH . 
H 4 HOH B 37 737 128 HOH HOH . 
H 4 HOH B 38 738 80 HOH HOH . 
H 4 HOH B 39 739 69 HOH HOH . 
H 4 HOH B 40 740 98 HOH HOH . 
H 4 HOH B 41 741 68 HOH HOH . 
H 4 HOH B 42 742 117 HOH HOH . 
H 4 HOH B 43 743 16 HOH HOH . 
H 4 HOH B 44 744 115 HOH HOH . 
H 4 HOH B 45 745 57 HOH HOH . 
H 4 HOH B 46 746 75 HOH HOH . 
H 4 HOH B 47 747 137 HOH HOH . 
H 4 HOH B 48 748 77 HOH HOH . 
H 4 HOH B 49 749 123 HOH HOH . 
H 4 HOH B 50 750 60 HOH HOH . 
H 4 HOH B 51 751 87 HOH HOH . 
H 4 HOH B 52 752 10 HOH HOH . 
H 4 HOH B 53 753 131 HOH HOH . 
H 4 HOH B 54 754 90 HOH HOH . 
H 4 HOH B 55 755 66 HOH HOH . 
H 4 HOH B 56 756 49 HOH HOH . 
H 4 HOH B 57 757 67 HOH HOH . 
H 4 HOH B 58 758 63 HOH HOH . 
H 4 HOH B 59 759 133 HOH HOH . 
H 4 HOH B 60 760 113 HOH HOH . 
H 4 HOH B 61 761 30 HOH HOH . 
H 4 HOH B 62 762 120 HOH HOH . 
H 4 HOH B 63 763 130 HOH HOH . 
H 4 HOH B 64 764 136 HOH HOH . 
H 4 HOH B 65 765 62 HOH HOH . 
H 4 HOH B 66 766 89 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MLA . . . F 2 -26.86 7.538 40.447 1 97.63 ? C1 MLA 601 B 1 
HETATM 2 O O1A MLA . . . F 2 -27.732 7.322 41.317 1 79.33 ? O1A MLA 601 B 1 
HETATM 3 O O1B MLA . . . F 2 -26.332 8.642 40.2 1 100.49 ? O1B MLA 601 B 1 
HETATM 4 C C2 MLA . . . F 2 -26.418 6.315 39.631 1 76.43 ? C2 MLA 601 B 1 
HETATM 5 C C3 MLA . . . F 2 -26.925 6.411 38.181 1 102.88 ? C3 MLA 601 B 1 
HETATM 6 O O3A MLA . . . F 2 -27.045 5.325 37.573 1 90.78 ? O3A MLA 601 B 1 
HETATM 7 O O3B MLA . . . F 2 -27.174 7.542 37.716 1 107.68 ? O3B MLA 601 B 1 
#
_model_server_stats.io_time_ms              81 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           225 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           7 
#