data_8SC2 # _model_server_result.job_id 6ylR-f7zS-GveoXYokGzhQ _model_server_result.datetime_utc '2025-08-31 14:55:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sc2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8SC2 # _exptl.entry_id 8SC2 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 414.518 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Diltiazem _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SC2 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SC2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 32 A CYS 50 1_555 A SG CYS 103 A CYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 44 A CYS 62 1_555 A SG CYS 84 A CYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 70 A CYS 88 1_555 A SG CYS 124 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C22 H26 N2 O4 S' _chem_comp.formula_weight 414.518 _chem_comp.id C9F _chem_comp.mon_nstd_flag . _chem_comp.name Diltiazem _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C18 C9F sing 70 n n C18 O19 C9F doub 71 n n C18 O17 C9F sing 72 n n O17 C16 C9F sing 73 n n O01 C02 C9F doub 74 n n C16 C02 C9F sing 75 n n C16 C07 C9F sing 76 n n C10 C09 C9F doub 77 n y C10 C11 C9F sing 78 n y O12 C11 C9F sing 79 n n O12 C13 C9F sing 80 n n C09 C08 C9F sing 81 n y C11 C14 C9F doub 82 n y C28 N27 C9F sing 83 n n C02 N03 C9F sing 84 n n N27 C29 C9F sing 85 n n N27 C26 C9F sing 86 n n C08 C07 C9F sing 87 n n C08 C15 C9F doub 88 n y C14 C15 C9F sing 89 n y C07 S06 C9F sing 90 n n N03 C25 C9F sing 91 n n N03 C04 C9F sing 92 n n C26 C25 C9F sing 93 n n S06 C05 C9F sing 94 n n C04 C05 C9F doub 95 n y C04 C24 C9F sing 96 n y C05 C21 C9F sing 97 n y C24 C23 C9F doub 98 n y C21 C22 C9F doub 99 n y C23 C22 C9F sing 100 n y C10 H1 C9F sing 101 n n C13 H2 C9F sing 102 n n C13 H3 C9F sing 103 n n C13 H4 C9F sing 104 n n C15 H5 C9F sing 105 n n C20 H6 C9F sing 106 n n C20 H7 C9F sing 107 n n C20 H8 C9F sing 108 n n C21 H9 C9F sing 109 n n C22 H10 C9F sing 110 n n C24 H11 C9F sing 111 n n C26 H12 C9F sing 112 n n C26 H13 C9F sing 113 n n C28 H14 C9F sing 114 n n C28 H15 C9F sing 115 n n C28 H16 C9F sing 116 n n C07 H17 C9F sing 117 n n C09 H18 C9F sing 118 n n C14 H19 C9F sing 119 n n C16 H20 C9F sing 120 n n C23 H21 C9F sing 121 n n C25 H22 C9F sing 122 n n C25 H23 C9F sing 123 n n C29 H25 C9F sing 124 n n C29 H26 C9F sing 125 n n C29 H27 C9F sing 126 n n # _atom_sites.entry_id 8SC2 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id C9F _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 601 _pdbx_nonpoly_scheme.pdb_mon_id C9F _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 C9F . . . B 2 117.318 98.788 107.405 1 64.57 ? C10 C9F 601 A 1 HETATM 2 C C13 C9F . . . B 2 120.621 97.888 106.234 1 70.33 ? C13 C9F 601 A 1 HETATM 3 C C15 C9F . . . B 2 118.092 101.261 106.447 1 72.72 ? C15 C9F 601 A 1 HETATM 4 C C20 C9F . . . B 2 113.921 103.644 103.737 1 65.29 ? C20 C9F 601 A 1 HETATM 5 C C21 C9F . . . B 2 113.371 104.462 108.791 1 70.73 ? C21 C9F 601 A 1 HETATM 6 C C22 C9F . . . B 2 112.231 105.203 108.532 1 71.46 ? C22 C9F 601 A 1 HETATM 7 C C24 C9F . . . B 2 111.368 103.409 107.185 1 66.34 ? C24 C9F 601 A 1 HETATM 8 C C26 C9F . . . B 2 110.738 100.114 105.929 1 63.33 ? C26 C9F 601 A 1 HETATM 9 C C28 C9F . . . B 2 109.757 98.314 107.205 1 66.24 ? C28 C9F 601 A 1 HETATM 10 O O01 C9F . . . B 2 113.844 99.953 105.577 1 66.56 ? O01 C9F 601 A 1 HETATM 11 C C02 C9F . . . B 2 113.691 101.046 106.082 1 67.57 ? C02 C9F 601 A 1 HETATM 12 N N03 C9F . . . B 2 112.638 101.37 106.875 1 69.04 ? N03 C9F 601 A 1 HETATM 13 C C04 C9F . . . B 2 112.508 102.657 107.441 1 67.99 ? C04 C9F 601 A 1 HETATM 14 C C05 C9F . . . B 2 113.518 103.19 108.249 1 70.18 ? C05 C9F 601 A 1 HETATM 15 S S06 C9F . . . B 2 114.982 102.266 108.593 1 69.02 ? S06 C9F 601 A 1 HETATM 16 C C07 C9F . . . B 2 115.787 102.221 106.949 1 69.43 ? C07 C9F 601 A 1 HETATM 17 C C08 C9F . . . B 2 116.797 101.103 106.924 1 70.99 ? C08 C9F 601 A 1 HETATM 18 C C09 C9F . . . B 2 116.433 99.846 107.405 1 64.24 ? C09 C9F 601 A 1 HETATM 19 C C11 C9F . . . B 2 118.615 98.959 106.922 1 68.22 ? C11 C9F 601 A 1 HETATM 20 O O12 C9F . . . B 2 119.409 97.874 106.96 1 74.27 ? O12 C9F 601 A 1 HETATM 21 C C14 C9F . . . B 2 118.998 100.208 106.44 1 68.88 ? C14 C9F 601 A 1 HETATM 22 C C16 C9F . . . B 2 114.707 102.163 105.852 1 68.07 ? C16 C9F 601 A 1 HETATM 23 O O17 C9F . . . B 2 115.372 101.984 104.616 1 69.73 ? O17 C9F 601 A 1 HETATM 24 C C18 C9F . . . B 2 114.812 102.464 103.494 1 69.41 ? C18 C9F 601 A 1 HETATM 25 O O19 C9F . . . B 2 115.03 101.979 102.414 1 74.5 ? O19 C9F 601 A 1 HETATM 26 C C23 C9F . . . B 2 111.23 104.674 107.728 1 70.43 ? C23 C9F 601 A 1 HETATM 27 C C25 C9F . . . B 2 111.607 100.375 107.157 1 65.49 ? C25 C9F 601 A 1 HETATM 28 N N27 C9F . . . B 2 109.537 99.366 106.238 1 58.28 ? N27 C9F 601 A 1 HETATM 29 C C29 C9F . . . B 2 108.934 98.824 105.039 1 60.82 ? C29 C9F 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 29 #