data_8SCA # _model_server_result.job_id '_vYdAmjfEmzyK_vgJaAeew' _model_server_result.datetime_utc '2024-11-22 09:59:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sca # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":804}' # _entry.id 8SCA # _exptl.entry_id 8SCA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SCA _cell.length_a 53.36 _cell.length_b 54.631 _cell.length_c 73.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SCA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8SCA _atom_sites.fract_transf_matrix[1][1] 0.018741 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018305 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01355 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO B 1 801 1 EDO EDO . C 2 EDO B 1 802 2 EDO EDO . D 2 EDO B 1 803 3 EDO EDO . E 2 EDO B 1 804 5 EDO EDO . F 2 EDO B 1 805 6 EDO EDO . G 3 HOH B 1 901 154 HOH HOH . G 3 HOH B 2 902 181 HOH HOH . G 3 HOH B 3 903 155 HOH HOH . G 3 HOH B 4 904 133 HOH HOH . G 3 HOH B 5 905 156 HOH HOH . G 3 HOH B 6 906 150 HOH HOH . G 3 HOH B 7 907 66 HOH HOH . G 3 HOH B 8 908 33 HOH HOH . G 3 HOH B 9 909 106 HOH HOH . G 3 HOH B 10 910 101 HOH HOH . G 3 HOH B 11 911 87 HOH HOH . G 3 HOH B 12 912 23 HOH HOH . G 3 HOH B 13 913 107 HOH HOH . G 3 HOH B 14 914 12 HOH HOH . G 3 HOH B 15 915 32 HOH HOH . G 3 HOH B 16 916 187 HOH HOH . G 3 HOH B 17 917 27 HOH HOH . G 3 HOH B 18 918 125 HOH HOH . G 3 HOH B 19 919 85 HOH HOH . G 3 HOH B 20 920 25 HOH HOH . G 3 HOH B 21 921 7 HOH HOH . G 3 HOH B 22 922 169 HOH HOH . G 3 HOH B 23 923 136 HOH HOH . G 3 HOH B 24 924 5 HOH HOH . G 3 HOH B 25 925 18 HOH HOH . G 3 HOH B 26 926 74 HOH HOH . G 3 HOH B 27 927 83 HOH HOH . G 3 HOH B 28 928 108 HOH HOH . G 3 HOH B 29 929 153 HOH HOH . G 3 HOH B 30 930 73 HOH HOH . G 3 HOH B 31 931 19 HOH HOH . G 3 HOH B 32 932 123 HOH HOH . G 3 HOH B 33 933 82 HOH HOH . G 3 HOH B 34 934 24 HOH HOH . G 3 HOH B 35 935 31 HOH HOH . G 3 HOH B 36 936 8 HOH HOH . G 3 HOH B 37 937 149 HOH HOH . G 3 HOH B 38 938 126 HOH HOH . G 3 HOH B 39 939 67 HOH HOH . G 3 HOH B 40 940 77 HOH HOH . G 3 HOH B 41 941 118 HOH HOH . G 3 HOH B 42 942 134 HOH HOH . G 3 HOH B 43 943 39 HOH HOH . G 3 HOH B 44 944 76 HOH HOH . G 3 HOH B 45 945 157 HOH HOH . G 3 HOH B 46 946 43 HOH HOH . G 3 HOH B 47 947 111 HOH HOH . G 3 HOH B 48 948 81 HOH HOH . G 3 HOH B 49 949 1 HOH HOH . G 3 HOH B 50 950 193 HOH HOH . G 3 HOH B 51 951 46 HOH HOH . G 3 HOH B 52 952 80 HOH HOH . G 3 HOH B 53 953 99 HOH HOH . G 3 HOH B 54 954 109 HOH HOH . G 3 HOH B 55 955 50 HOH HOH . G 3 HOH B 56 956 37 HOH HOH . G 3 HOH B 57 957 97 HOH HOH . G 3 HOH B 58 958 130 HOH HOH . G 3 HOH B 59 959 13 HOH HOH . G 3 HOH B 60 960 79 HOH HOH . G 3 HOH B 61 961 116 HOH HOH . G 3 HOH B 62 962 184 HOH HOH . G 3 HOH B 63 963 3 HOH HOH . G 3 HOH B 64 964 65 HOH HOH . G 3 HOH B 65 965 40 HOH HOH . G 3 HOH B 66 966 122 HOH HOH . G 3 HOH B 67 967 6 HOH HOH . G 3 HOH B 68 968 161 HOH HOH . G 3 HOH B 69 969 14 HOH HOH . G 3 HOH B 70 970 55 HOH HOH . G 3 HOH B 71 971 60 HOH HOH . G 3 HOH B 72 972 105 HOH HOH . G 3 HOH B 73 973 9 HOH HOH . G 3 HOH B 74 974 17 HOH HOH . G 3 HOH B 75 975 28 HOH HOH . G 3 HOH B 76 976 91 HOH HOH . G 3 HOH B 77 977 72 HOH HOH . G 3 HOH B 78 978 121 HOH HOH . G 3 HOH B 79 979 68 HOH HOH . G 3 HOH B 80 980 104 HOH HOH . G 3 HOH B 81 981 63 HOH HOH . G 3 HOH B 82 982 21 HOH HOH . G 3 HOH B 83 983 16 HOH HOH . G 3 HOH B 84 984 2 HOH HOH . G 3 HOH B 85 985 94 HOH HOH . G 3 HOH B 86 986 93 HOH HOH . G 3 HOH B 87 987 141 HOH HOH . G 3 HOH B 88 988 143 HOH HOH . G 3 HOH B 89 989 15 HOH HOH . G 3 HOH B 90 990 11 HOH HOH . G 3 HOH B 91 991 58 HOH HOH . G 3 HOH B 92 992 26 HOH HOH . G 3 HOH B 93 993 167 HOH HOH . G 3 HOH B 94 994 171 HOH HOH . G 3 HOH B 95 995 47 HOH HOH . G 3 HOH B 96 996 102 HOH HOH . G 3 HOH B 97 997 69 HOH HOH . G 3 HOH B 98 998 110 HOH HOH . G 3 HOH B 99 999 84 HOH HOH . G 3 HOH B 100 1000 4 HOH HOH . G 3 HOH B 101 1001 34 HOH HOH . G 3 HOH B 102 1002 36 HOH HOH . G 3 HOH B 103 1003 35 HOH HOH . G 3 HOH B 104 1004 170 HOH HOH . G 3 HOH B 105 1005 52 HOH HOH . G 3 HOH B 106 1006 114 HOH HOH . G 3 HOH B 107 1007 71 HOH HOH . G 3 HOH B 108 1008 86 HOH HOH . G 3 HOH B 109 1009 20 HOH HOH . G 3 HOH B 110 1010 163 HOH HOH . G 3 HOH B 111 1011 38 HOH HOH . G 3 HOH B 112 1012 103 HOH HOH . G 3 HOH B 113 1013 61 HOH HOH . G 3 HOH B 114 1014 98 HOH HOH . G 3 HOH B 115 1015 88 HOH HOH . G 3 HOH B 116 1016 138 HOH HOH . G 3 HOH B 117 1017 112 HOH HOH . G 3 HOH B 118 1018 119 HOH HOH . G 3 HOH B 119 1019 75 HOH HOH . G 3 HOH B 120 1020 96 HOH HOH . G 3 HOH B 121 1021 49 HOH HOH . G 3 HOH B 122 1022 145 HOH HOH . G 3 HOH B 123 1023 195 HOH HOH . G 3 HOH B 124 1024 45 HOH HOH . G 3 HOH B 125 1025 44 HOH HOH . G 3 HOH B 126 1026 70 HOH HOH . G 3 HOH B 127 1027 10 HOH HOH . G 3 HOH B 128 1028 41 HOH HOH . G 3 HOH B 129 1029 57 HOH HOH . G 3 HOH B 130 1030 173 HOH HOH . G 3 HOH B 131 1031 62 HOH HOH . G 3 HOH B 132 1032 135 HOH HOH . G 3 HOH B 133 1033 129 HOH HOH . G 3 HOH B 134 1034 95 HOH HOH . G 3 HOH B 135 1035 120 HOH HOH . G 3 HOH B 136 1036 78 HOH HOH . G 3 HOH B 137 1037 152 HOH HOH . G 3 HOH B 138 1038 139 HOH HOH . G 3 HOH B 139 1039 89 HOH HOH . G 3 HOH B 140 1040 131 HOH HOH . G 3 HOH B 141 1041 151 HOH HOH . G 3 HOH B 142 1042 137 HOH HOH . G 3 HOH B 143 1043 22 HOH HOH . G 3 HOH B 144 1044 174 HOH HOH . G 3 HOH B 145 1045 59 HOH HOH . G 3 HOH B 146 1046 189 HOH HOH . G 3 HOH B 147 1047 172 HOH HOH . G 3 HOH B 148 1048 188 HOH HOH . G 3 HOH B 149 1049 164 HOH HOH . G 3 HOH B 150 1050 175 HOH HOH . G 3 HOH B 151 1051 146 HOH HOH . G 3 HOH B 152 1052 51 HOH HOH . G 3 HOH B 153 1053 148 HOH HOH . G 3 HOH B 154 1054 147 HOH HOH . G 3 HOH B 155 1055 132 HOH HOH . G 3 HOH B 156 1056 115 HOH HOH . G 3 HOH B 157 1057 165 HOH HOH . G 3 HOH B 158 1058 113 HOH HOH . G 3 HOH B 159 1059 190 HOH HOH . G 3 HOH B 160 1060 127 HOH HOH . G 3 HOH B 161 1061 30 HOH HOH . G 3 HOH B 162 1062 182 HOH HOH . G 3 HOH B 163 1063 176 HOH HOH . G 3 HOH B 164 1064 42 HOH HOH . G 3 HOH B 165 1065 144 HOH HOH . G 3 HOH B 166 1066 64 HOH HOH . G 3 HOH B 167 1067 90 HOH HOH . G 3 HOH B 168 1068 166 HOH HOH . G 3 HOH B 169 1069 100 HOH HOH . G 3 HOH B 170 1070 186 HOH HOH . G 3 HOH B 171 1071 177 HOH HOH . G 3 HOH B 172 1072 48 HOH HOH . G 3 HOH B 173 1073 179 HOH HOH . G 3 HOH B 174 1074 158 HOH HOH . G 3 HOH B 175 1075 185 HOH HOH . G 3 HOH B 176 1076 53 HOH HOH . G 3 HOH B 177 1077 160 HOH HOH . G 3 HOH B 178 1078 159 HOH HOH . G 3 HOH B 179 1079 194 HOH HOH . G 3 HOH B 180 1080 56 HOH HOH . G 3 HOH B 181 1081 168 HOH HOH . G 3 HOH B 182 1082 142 HOH HOH . G 3 HOH B 183 1083 180 HOH HOH . G 3 HOH B 184 1084 92 HOH HOH . G 3 HOH B 185 1085 178 HOH HOH . G 3 HOH B 186 1086 140 HOH HOH . G 3 HOH B 187 1087 54 HOH HOH . G 3 HOH B 188 1088 192 HOH HOH . G 3 HOH B 189 1089 128 HOH HOH . G 3 HOH B 190 1090 29 HOH HOH . G 3 HOH B 191 1091 117 HOH HOH . G 3 HOH B 192 1092 191 HOH HOH . G 3 HOH B 193 1093 196 HOH HOH . G 3 HOH B 194 1094 124 HOH HOH . G 3 HOH B 195 1095 183 HOH HOH . G 3 HOH B 196 1096 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 2 -11.154 -15.912 -19.503 1 18.64 ? C1 EDO 804 B 1 HETATM 2 O O1 EDO . . . E 2 -11.153 -14.886 -18.494 1 21.97 ? O1 EDO 804 B 1 HETATM 3 C C2 EDO . . . E 2 -9.723 -16.285 -19.859 1 22.63 ? C2 EDO 804 B 1 HETATM 4 O O2 EDO . . . E 2 -9.14 -17.013 -18.772 1 22.19 ? O2 EDO 804 B 1 HETATM 5 H H11 EDO . . . E 2 -11.675 -15.553 -20.393 1 22.35 ? H11 EDO 804 B 1 HETATM 6 H H12 EDO . . . E 2 -11.685 -16.792 -19.135 1 22.35 ? H12 EDO 804 B 1 HETATM 7 H HO1 EDO . . . E 2 -12.06 -14.714 -18.208 1 26.35 ? HO1 EDO 804 B 1 HETATM 8 H H21 EDO . . . E 2 -9.141 -15.382 -20.057 1 27.15 ? H21 EDO 804 B 1 HETATM 9 H H22 EDO . . . E 2 -9.712 -16.896 -20.764 1 27.15 ? H22 EDO 804 B 1 HETATM 10 H HO2 EDO . . . E 2 -9.71 -16.942 -17.994 1 26.62 ? HO2 EDO 804 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #