data_8SCW
#
_model_server_result.job_id            2oCTAF6Dg-A9GJp4pHzf9Q 
_model_server_result.datetime_utc      '2025-07-09 21:38:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8scw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":503}' 
#
_entry.id    8SCW 
#
_exptl.entry_id    8SCW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              425.459 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (6M)-6-(5-cyano-1H-pyrazolo[3,4-b]pyridin-1-yl)-N-[(2R)-2-fluoro-3-hydroxy-3-methylbutyl]-4-[(propan-2-yl)amino]pyridine-3-carboxamide 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          126.6 
_cell.angle_gamma         90 
_cell.entry_id            8SCW 
_cell.length_a            135.286 
_cell.length_b            140.394 
_cell.length_c            85.915 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SCW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,Q 1 1 
B,G,H,I,R 2 1 
C,J,K,L,M,S 3 1 
D,N,O,P,T 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 I N N 
? 3 M N N 
? 3 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C TPO 187 A TPO 342 1_555 A N VAL 188 A VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale2 A C MET 189 A MET 344 1_555 A N TPO 190 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale3 A C TPO 190 A TPO 345 1_555 A N SEP 191 A SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? 
covale ? covale4 A C SEP 191 A SEP 346 1_555 A N ARG 192 A ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
covale ? covale5 B C TPO 187 B TPO 342 1_555 B N VAL 188 B VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? 
covale ? covale6 B C MET 189 B MET 344 1_555 B N TPO 190 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale7 B C TPO 190 B TPO 345 1_555 B N SEP 191 B SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? 
covale ? covale8 B C SEP 191 B SEP 346 1_555 B N ARG 192 B ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? 
covale ? covale9 C C TPO 187 C TPO 342 1_555 C N VAL 188 C VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
covale ? covale10 C C MET 189 C MET 344 1_555 C N TPO 190 C TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale11 C C TPO 190 C TPO 345 1_555 C N SEP 191 C SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
covale ? covale12 C C SEP 191 C SEP 346 1_555 C N ARG 192 C ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? 
covale ? covale13 D C TPO 187 D TPO 342 1_555 D N VAL 188 D VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale14 D C MET 189 D MET 344 1_555 D N TPO 190 D TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale15 D C TPO 190 D TPO 345 1_555 D N SEP 191 D SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale16 D C SEP 191 D SEP 346 1_555 D N ARG 192 D ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.359 ? 
#
_chem_comp.formula           'C21 H24 F N7 O2' 
_chem_comp.formula_weight    425.459 
_chem_comp.id                ZVA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (6M)-6-(5-cyano-1H-pyrazolo[3,4-b]pyridin-1-yl)-N-[(2R)-2-fluoro-3-hydroxy-3-methylbutyl]-4-[(propan-2-yl)amino]pyridine-3-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N5 C13 ZVA doub 419 n y 
N5 C7 ZVA sing 420 n y 
C13 C14 ZVA sing 421 n y 
N2 N3 ZVA sing 422 n y 
N2 C6 ZVA doub 423 n y 
N3 C5 ZVA sing 424 n y 
N3 C7 ZVA sing 425 n n 
C6 C4 ZVA sing 426 n y 
C5 N1 ZVA doub 427 n y 
C5 C4 ZVA sing 428 n y 
C7 C8 ZVA doub 429 n y 
N1 C2 ZVA sing 430 n y 
C4 C3 ZVA doub 431 n y 
C2 C1 ZVA doub 432 n y 
C16 N6 ZVA sing 433 n n 
C16 C17 ZVA sing 434 n n 
C3 C1 ZVA sing 435 n y 
N6 C15 ZVA sing 436 n n 
C12 C10 ZVA sing 437 n n 
C1 C ZVA sing 438 n n 
C14 C15 ZVA sing 439 n n 
C14 C9 ZVA doub 440 n y 
C15 O ZVA doub 441 n n 
C8 C9 ZVA sing 442 n y 
C20 C18 ZVA sing 443 n n 
C N ZVA trip 444 n n 
C9 N4 ZVA sing 445 n n 
O1 C18 ZVA sing 446 n n 
N4 C10 ZVA sing 447 n n 
C18 C17 ZVA sing 448 n n 
C18 C19 ZVA sing 449 n n 
C10 C11 ZVA sing 450 n n 
C17 F ZVA sing 451 n n 
C13 H1 ZVA sing 452 n n 
C17 H2 ZVA sing 453 n n 
C16 H3 ZVA sing 454 n n 
C16 H4 ZVA sing 455 n n 
C19 H5 ZVA sing 456 n n 
C19 H6 ZVA sing 457 n n 
C19 H7 ZVA sing 458 n n 
C20 H8 ZVA sing 459 n n 
C20 H9 ZVA sing 460 n n 
C20 H10 ZVA sing 461 n n 
C11 H11 ZVA sing 462 n n 
C11 H12 ZVA sing 463 n n 
C11 H13 ZVA sing 464 n n 
C12 H14 ZVA sing 465 n n 
C12 H15 ZVA sing 466 n n 
C12 H16 ZVA sing 467 n n 
O1 H17 ZVA sing 468 n n 
N6 H18 ZVA sing 469 n n 
N4 H19 ZVA sing 470 n n 
C10 H20 ZVA sing 471 n n 
C8 H21 ZVA sing 472 n n 
C2 H22 ZVA sing 473 n n 
C6 H23 ZVA sing 474 n n 
C3 H24 ZVA sing 475 n n 
#
_atom_sites.entry_id                     8SCW 
_atom_sites.fract_transf_matrix[1][1]    -0.002321 
_atom_sites.fract_transf_matrix[1][2]    -0.000079 
_atom_sites.fract_transf_matrix[1][3]    0.00891 
_atom_sites.fract_transf_matrix[2][1]    0.006757 
_atom_sites.fract_transf_matrix[2][2]    -0.001426 
_atom_sites.fract_transf_matrix[2][3]    0.001748 
_atom_sites.fract_transf_matrix[3][1]    0.00005 
_atom_sites.fract_transf_matrix[3][2]    0.011329 
_atom_sites.fract_transf_matrix[3][3]    0.009046 
_atom_sites.fract_transf_vector[1]       0.08285 
_atom_sites.fract_transf_vector[2]       -0.15475 
_atom_sites.fract_transf_vector[3]       -0.44547 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 501 501 SO4 SO4 . 
F 3 ZVA A 1 502 502 ZVA LG1 . 
G 2 SO4 B 1 501 501 SO4 SO4 . 
H 2 SO4 B 1 502 502 SO4 SO4 . 
I 3 ZVA B 1 503 503 ZVA LG1 . 
J 2 SO4 C 1 501 501 SO4 SO4 . 
K 2 SO4 C 1 502 502 SO4 SO4 . 
L 2 SO4 C 1 503 503 SO4 SO4 . 
M 3 ZVA C 1 504 504 ZVA LG1 . 
N 2 SO4 D 1 501 501 SO4 SO4 . 
O 2 SO4 D 1 502 502 SO4 SO4 . 
P 3 ZVA D 1 503 503 ZVA LG1 . 
Q 4 HOH A 1 601 601 HOH HOH . 
Q 4 HOH A 2 602 602 HOH HOH . 
Q 4 HOH A 3 603 603 HOH HOH . 
Q 4 HOH A 4 604 604 HOH HOH . 
Q 4 HOH A 5 605 605 HOH HOH . 
Q 4 HOH A 6 606 606 HOH HOH . 
Q 4 HOH A 7 607 607 HOH HOH . 
Q 4 HOH A 8 608 608 HOH HOH . 
Q 4 HOH A 9 609 609 HOH HOH . 
Q 4 HOH A 10 610 610 HOH HOH . 
Q 4 HOH A 11 611 611 HOH HOH . 
Q 4 HOH A 12 612 612 HOH HOH . 
Q 4 HOH A 13 613 613 HOH HOH . 
Q 4 HOH A 14 614 614 HOH HOH . 
R 4 HOH B 1 601 601 HOH HOH . 
R 4 HOH B 2 602 602 HOH HOH . 
R 4 HOH B 3 603 603 HOH HOH . 
R 4 HOH B 4 604 604 HOH HOH . 
R 4 HOH B 5 605 605 HOH HOH . 
R 4 HOH B 6 606 606 HOH HOH . 
R 4 HOH B 7 607 607 HOH HOH . 
R 4 HOH B 8 608 608 HOH HOH . 
R 4 HOH B 9 609 609 HOH HOH . 
R 4 HOH B 10 610 610 HOH HOH . 
R 4 HOH B 11 611 611 HOH HOH . 
R 4 HOH B 12 612 612 HOH HOH . 
R 4 HOH B 13 613 613 HOH HOH . 
R 4 HOH B 14 614 614 HOH HOH . 
R 4 HOH B 15 615 615 HOH HOH . 
R 4 HOH B 16 616 616 HOH HOH . 
R 4 HOH B 17 617 617 HOH HOH . 
R 4 HOH B 18 618 618 HOH HOH . 
R 4 HOH B 19 619 619 HOH HOH . 
R 4 HOH B 20 620 620 HOH HOH . 
S 4 HOH C 1 601 601 HOH HOH . 
S 4 HOH C 2 602 602 HOH HOH . 
S 4 HOH C 3 603 603 HOH HOH . 
S 4 HOH C 4 604 604 HOH HOH . 
S 4 HOH C 5 605 605 HOH HOH . 
S 4 HOH C 6 606 606 HOH HOH . 
S 4 HOH C 7 607 607 HOH HOH . 
S 4 HOH C 8 608 608 HOH HOH . 
S 4 HOH C 9 609 609 HOH HOH . 
S 4 HOH C 10 610 610 HOH HOH . 
T 4 HOH D 1 601 601 HOH HOH . 
T 4 HOH D 2 602 602 HOH HOH . 
T 4 HOH D 3 603 603 HOH HOH . 
T 4 HOH D 4 604 604 HOH HOH . 
T 4 HOH D 5 605 605 HOH HOH . 
T 4 HOH D 6 606 606 HOH HOH . 
T 4 HOH D 7 607 607 HOH HOH . 
T 4 HOH D 8 608 608 HOH HOH . 
T 4 HOH D 9 609 609 HOH HOH . 
T 4 HOH D 10 610 610 HOH HOH . 
T 4 HOH D 11 611 611 HOH HOH . 
T 4 HOH D 12 612 612 HOH HOH . 
T 4 HOH D 13 613 613 HOH HOH . 
T 4 HOH D 14 614 614 HOH HOH . 
T 4 HOH D 15 615 615 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 ZVA . . . P 3 16.314 65.299 35.281 1 34.99 ? C13 ZVA 503 D 1 
HETATM 2 C C18 ZVA . . . P 3 14.098 59.342 33.133 1 30.72 ? C18 ZVA 503 D 1 
HETATM 3 C C17 ZVA . . . P 3 14.925 60.678 33.327 1 37.7 ? C17 ZVA 503 D 1 
HETATM 4 C C16 ZVA . . . P 3 14.61 61.464 34.646 1 38.58 ? C16 ZVA 503 D 1 
HETATM 5 C C15 ZVA . . . P 3 16.527 62.862 35.407 1 37.08 ? C15 ZVA 503 D 1 
HETATM 6 C C19 ZVA . . . P 3 14.249 58.834 31.706 1 29.81 ? C19 ZVA 503 D 1 
HETATM 7 C C20 ZVA . . . P 3 12.626 59.519 33.491 1 22.84 ? C20 ZVA 503 D 1 
HETATM 8 C C11 ZVA . . . P 3 21.562 62.404 35.795 1 43.6 ? C11 ZVA 503 D 1 
HETATM 9 C C12 ZVA . . . P 3 21.035 63.787 37.826 1 45.6 ? C12 ZVA 503 D 1 
HETATM 10 F F ZVA . . . P 3 16.302 60.375 33.261 1 40.53 ? F ZVA 503 D 1 
HETATM 11 O O1 ZVA . . . P 3 14.655 58.331 33.993 1 28.24 ? O1 ZVA 503 D 1 
HETATM 12 N N6 ZVA . . . P 3 15.29 62.786 34.739 1 37.53 ? N6 ZVA 503 D 1 
HETATM 13 O O ZVA . . . P 3 17.081 61.831 35.853 1 38.57 ? O ZVA 503 D 1 
HETATM 14 C C14 ZVA . . . P 3 17.141 64.196 35.5 1 34.46 ? C14 ZVA 503 D 1 
HETATM 15 C C9 ZVA . . . P 3 18.522 64.438 35.797 1 38.24 ? C9 ZVA 503 D 1 
HETATM 16 N N4 ZVA . . . P 3 19.396 63.401 36.025 1 39.39 ? N4 ZVA 503 D 1 
HETATM 17 C C10 ZVA . . . P 3 20.817 63.602 36.335 1 42.82 ? C10 ZVA 503 D 1 
HETATM 18 C C8 ZVA . . . P 3 18.982 65.805 35.849 1 39.18 ? C8 ZVA 503 D 1 
HETATM 19 N N5 ZVA . . . P 3 16.698 66.596 35.309 1 35.44 ? N5 ZVA 503 D 1 
HETATM 20 C C7 ZVA . . . P 3 18.048 66.832 35.599 1 38.3 ? C7 ZVA 503 D 1 
HETATM 21 N N3 ZVA . . . P 3 18.409 68.224 35.716 1 36.14 ? N3 ZVA 503 D 1 
HETATM 22 C C5 ZVA . . . P 3 19.541 68.8 36.244 1 34.37 ? C5 ZVA 503 D 1 
HETATM 23 N N1 ZVA . . . P 3 20.565 68.212 36.965 1 38.13 ? N1 ZVA 503 D 1 
HETATM 24 C C2 ZVA . . . P 3 21.545 69.047 37.318 1 39.52 ? C2 ZVA 503 D 1 
HETATM 25 N N2 ZVA . . . P 3 17.631 69.187 35.106 1 38.23 ? N2 ZVA 503 D 1 
HETATM 26 C C6 ZVA . . . P 3 18.257 70.339 35.216 1 37.86 ? C6 ZVA 503 D 1 
HETATM 27 C C4 ZVA . . . P 3 19.477 70.177 35.909 1 35.27 ? C4 ZVA 503 D 1 
HETATM 28 C C3 ZVA . . . P 3 20.523 71.02 36.266 1 37.03 ? C3 ZVA 503 D 1 
HETATM 29 C C1 ZVA . . . P 3 21.562 70.431 36.981 1 39.13 ? C1 ZVA 503 D 1 
HETATM 30 C C ZVA . . . P 3 22.654 71.17 37.374 1 42.21 ? C ZVA 503 D 1 
HETATM 31 N N ZVA . . . P 3 23.559 71.77 37.688 1 47.2 ? N ZVA 503 D 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          23 
_model_server_stats.element_count           31 
#