data_8SE5 # _model_server_result.job_id dOoHYaKRhzE4_FvGkXQQYQ _model_server_result.datetime_utc '2024-11-19 16:32:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8se5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 8SE5 # _exptl.entry_id 8SE5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.87 _cell.angle_gamma 90 _cell.entry_id 8SE5 _cell.length_a 100.21 _cell.length_b 43.361 _cell.length_c 64.526 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SE5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 B CYS 96 1_555 A SG CYS 18 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 12 B CYS 99 1_555 A SG CYS 23 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf3 A SG CYS 40 B CYS 127 1_555 A SG CYS 124 B CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf4 A SG CYS 102 B CYS 189 1_555 A SG CYS 116 B CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf5 B SG CYS 9 A CYS 96 1_555 B SG CYS 18 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 B SG CYS 12 A CYS 99 1_555 B SG CYS 23 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf7 B SG CYS 40 A CYS 127 1_555 B SG CYS 124 A CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf8 B SG CYS 102 A CYS 189 1_555 B SG CYS 116 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 253 n n C1 C2 PGE sing 254 n n C1 H1 PGE sing 255 n n C1 H12 PGE sing 256 n n O1 HO1 PGE sing 257 n n C2 O2 PGE sing 258 n n C2 H2 PGE sing 259 n n C2 H22 PGE sing 260 n n O2 C3 PGE sing 261 n n C3 C4 PGE sing 262 n n C3 H3 PGE sing 263 n n C3 H32 PGE sing 264 n n C4 O3 PGE sing 265 n n C4 H4 PGE sing 266 n n C4 H42 PGE sing 267 n n O4 C6 PGE sing 268 n n O4 HO4 PGE sing 269 n n C6 C5 PGE sing 270 n n C6 H6 PGE sing 271 n n C6 H62 PGE sing 272 n n C5 O3 PGE sing 273 n n C5 H5 PGE sing 274 n n C5 H52 PGE sing 275 n n # _atom_sites.entry_id 8SE5 _atom_sites.fract_transf_matrix[1][1] 0.009979 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00228 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023062 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015897 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE B 1 301 216 PGE PGE . D 2 PGE B 1 302 217 PGE PGE . E 3 PEG B 1 303 218 PEG PEG . F 2 PGE A 1 301 216 PGE PGE . G 2 PGE A 1 302 217 PGE PGE . H 4 ZW7 A 1 303 218 ZW7 UNL . I 5 HOH B 1 401 249 HOH HOH . I 5 HOH B 2 402 244 HOH HOH . I 5 HOH B 3 403 227 HOH HOH . I 5 HOH B 4 404 226 HOH HOH . I 5 HOH B 5 405 233 HOH HOH . I 5 HOH B 6 406 223 HOH HOH . I 5 HOH B 7 407 274 HOH HOH . I 5 HOH B 8 408 248 HOH HOH . I 5 HOH B 9 409 240 HOH HOH . I 5 HOH B 10 410 239 HOH HOH . I 5 HOH B 11 411 286 HOH HOH . I 5 HOH B 12 412 264 HOH HOH . I 5 HOH B 13 413 276 HOH HOH . I 5 HOH B 14 414 253 HOH HOH . I 5 HOH B 15 415 231 HOH HOH . I 5 HOH B 16 416 275 HOH HOH . I 5 HOH B 17 417 220 HOH HOH . I 5 HOH B 18 418 270 HOH HOH . I 5 HOH B 19 419 229 HOH HOH . I 5 HOH B 20 420 252 HOH HOH . I 5 HOH B 21 421 247 HOH HOH . I 5 HOH B 22 422 243 HOH HOH . I 5 HOH B 23 423 238 HOH HOH . I 5 HOH B 24 424 269 HOH HOH . I 5 HOH B 25 425 234 HOH HOH . I 5 HOH B 26 426 278 HOH HOH . I 5 HOH B 27 427 245 HOH HOH . I 5 HOH B 28 428 242 HOH HOH . I 5 HOH B 29 429 221 HOH HOH . I 5 HOH B 30 430 222 HOH HOH . I 5 HOH B 31 431 257 HOH HOH . I 5 HOH B 32 432 232 HOH HOH . I 5 HOH B 33 433 225 HOH HOH . I 5 HOH B 34 434 259 HOH HOH . I 5 HOH B 35 435 258 HOH HOH . I 5 HOH B 36 436 228 HOH HOH . I 5 HOH B 37 437 235 HOH HOH . I 5 HOH B 38 438 237 HOH HOH . I 5 HOH B 39 439 219 HOH HOH . I 5 HOH B 40 440 224 HOH HOH . I 5 HOH B 41 441 267 HOH HOH . I 5 HOH B 42 442 261 HOH HOH . I 5 HOH B 43 443 268 HOH HOH . I 5 HOH B 44 444 272 HOH HOH . I 5 HOH B 45 445 236 HOH HOH . I 5 HOH B 46 446 265 HOH HOH . I 5 HOH B 47 447 246 HOH HOH . I 5 HOH B 48 448 251 HOH HOH . I 5 HOH B 49 449 263 HOH HOH . I 5 HOH B 50 450 256 HOH HOH . I 5 HOH B 51 451 230 HOH HOH . I 5 HOH B 52 452 277 HOH HOH . I 5 HOH B 53 453 241 HOH HOH . I 5 HOH B 54 454 287 HOH HOH . I 5 HOH B 55 455 254 HOH HOH . I 5 HOH B 56 456 285 HOH HOH . I 5 HOH B 57 457 260 HOH HOH . I 5 HOH B 58 458 271 HOH HOH . I 5 HOH B 59 459 281 HOH HOH . I 5 HOH B 60 460 290 HOH HOH . I 5 HOH B 61 461 279 HOH HOH . I 5 HOH B 62 462 255 HOH HOH . I 5 HOH B 63 463 266 HOH HOH . I 5 HOH B 64 464 282 HOH HOH . I 5 HOH B 65 465 273 HOH HOH . I 5 HOH B 66 466 280 HOH HOH . I 5 HOH B 67 467 250 HOH HOH . I 5 HOH B 68 468 283 HOH HOH . I 5 HOH B 69 469 305 HOH HOH . J 5 HOH A 1 401 235 HOH HOH . J 5 HOH A 2 402 268 HOH HOH . J 5 HOH A 3 403 302 HOH HOH . J 5 HOH A 4 404 237 HOH HOH . J 5 HOH A 5 405 306 HOH HOH . J 5 HOH A 6 406 284 HOH HOH . J 5 HOH A 7 407 247 HOH HOH . J 5 HOH A 8 408 238 HOH HOH . J 5 HOH A 9 409 239 HOH HOH . J 5 HOH A 10 410 241 HOH HOH . J 5 HOH A 11 411 225 HOH HOH . J 5 HOH A 12 412 220 HOH HOH . J 5 HOH A 13 413 256 HOH HOH . J 5 HOH A 14 414 245 HOH HOH . J 5 HOH A 15 415 224 HOH HOH . J 5 HOH A 16 416 236 HOH HOH . J 5 HOH A 17 417 265 HOH HOH . J 5 HOH A 18 418 267 HOH HOH . J 5 HOH A 19 419 229 HOH HOH . J 5 HOH A 20 420 233 HOH HOH . J 5 HOH A 21 421 231 HOH HOH . J 5 HOH A 22 422 280 HOH HOH . J 5 HOH A 23 423 228 HOH HOH . J 5 HOH A 24 424 234 HOH HOH . J 5 HOH A 25 425 219 HOH HOH . J 5 HOH A 26 426 255 HOH HOH . J 5 HOH A 27 427 288 HOH HOH . J 5 HOH A 28 428 240 HOH HOH . J 5 HOH A 29 429 243 HOH HOH . J 5 HOH A 30 430 287 HOH HOH . J 5 HOH A 31 431 252 HOH HOH . J 5 HOH A 32 432 286 HOH HOH . J 5 HOH A 33 433 263 HOH HOH . J 5 HOH A 34 434 279 HOH HOH . J 5 HOH A 35 435 248 HOH HOH . J 5 HOH A 36 436 230 HOH HOH . J 5 HOH A 37 437 266 HOH HOH . J 5 HOH A 38 438 221 HOH HOH . J 5 HOH A 39 439 260 HOH HOH . J 5 HOH A 40 440 293 HOH HOH . J 5 HOH A 41 441 301 HOH HOH . J 5 HOH A 42 442 281 HOH HOH . J 5 HOH A 43 443 303 HOH HOH . J 5 HOH A 44 444 242 HOH HOH . J 5 HOH A 45 445 254 HOH HOH . J 5 HOH A 46 446 283 HOH HOH . J 5 HOH A 47 447 285 HOH HOH . J 5 HOH A 48 448 289 HOH HOH . J 5 HOH A 49 449 308 HOH HOH . J 5 HOH A 50 450 232 HOH HOH . J 5 HOH A 51 451 222 HOH HOH . J 5 HOH A 52 452 227 HOH HOH . J 5 HOH A 53 453 291 HOH HOH . J 5 HOH A 54 454 226 HOH HOH . J 5 HOH A 55 455 223 HOH HOH . J 5 HOH A 56 456 271 HOH HOH . J 5 HOH A 57 457 278 HOH HOH . J 5 HOH A 58 458 269 HOH HOH . J 5 HOH A 59 459 251 HOH HOH . J 5 HOH A 60 460 257 HOH HOH . J 5 HOH A 61 461 309 HOH HOH . J 5 HOH A 62 462 262 HOH HOH . J 5 HOH A 63 463 297 HOH HOH . J 5 HOH A 64 464 259 HOH HOH . J 5 HOH A 65 465 274 HOH HOH . J 5 HOH A 66 466 272 HOH HOH . J 5 HOH A 67 467 246 HOH HOH . J 5 HOH A 68 468 298 HOH HOH . J 5 HOH A 69 469 253 HOH HOH . J 5 HOH A 70 470 273 HOH HOH . J 5 HOH A 71 471 250 HOH HOH . J 5 HOH A 72 472 249 HOH HOH . J 5 HOH A 73 473 277 HOH HOH . J 5 HOH A 74 474 262 HOH HOH . J 5 HOH A 75 475 295 HOH HOH . J 5 HOH A 76 476 270 HOH HOH . J 5 HOH A 77 477 276 HOH HOH . J 5 HOH A 78 478 244 HOH HOH . J 5 HOH A 79 479 261 HOH HOH . J 5 HOH A 80 480 282 HOH HOH . J 5 HOH A 81 481 258 HOH HOH . J 5 HOH A 82 482 294 HOH HOH . J 5 HOH A 83 483 307 HOH HOH . J 5 HOH A 84 484 304 HOH HOH . J 5 HOH A 85 485 299 HOH HOH . J 5 HOH A 86 486 296 HOH HOH . J 5 HOH A 87 487 292 HOH HOH . J 5 HOH A 88 488 264 HOH HOH . J 5 HOH A 89 489 300 HOH HOH . J 5 HOH A 90 490 275 HOH HOH . J 5 HOH A 91 491 284 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . C 2 12.504 -29.33 9.49 1 36 ? C1 PGE 301 B 1 HETATM 2 O O1 PGE . . . C 2 13.09 -29.698 8.245 1 39.03 ? O1 PGE 301 B 1 HETATM 3 C C2 PGE . . . C 2 12.194 -30.576 10.301 1 35.05 ? C2 PGE 301 B 1 HETATM 4 O O2 PGE . . . C 2 11.097 -31.26 9.72 1 33.32 ? O2 PGE 301 B 1 HETATM 5 C C3 PGE . . . C 2 10.609 -32.356 10.47 1 35.26 ? C3 PGE 301 B 1 HETATM 6 C C4 PGE . . . C 2 9.478 -33.024 9.704 1 28.32 ? C4 PGE 301 B 1 HETATM 7 O O4 PGE . . . C 2 10.217 -33.879 5.681 1 40.72 ? O4 PGE 301 B 1 HETATM 8 C C6 PGE . . . C 2 9.953 -34.952 6.579 1 42.7 ? C6 PGE 301 B 1 HETATM 9 C C5 PGE . . . C 2 9.218 -34.434 7.804 1 41.24 ? C5 PGE 301 B 1 HETATM 10 O O3 PGE . . . C 2 9.954 -33.391 8.419 1 35.87 ? O3 PGE 301 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #