data_8SE6 # _model_server_result.job_id DS9VP0MhiZ_MLll_ZIX2jA _model_server_result.datetime_utc '2025-01-10 18:42:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8se6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 8SE6 # _exptl.entry_id 8SE6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.87 _cell.angle_gamma 90 _cell.entry_id 8SE6 _cell.length_a 100.041 _cell.length_b 43.483 _cell.length_c 64.188 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SE6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 96 1_555 A SG CYS 18 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf2 A SG CYS 12 A CYS 99 1_555 A SG CYS 23 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf3 A SG CYS 40 A CYS 127 1_555 A SG CYS 124 A CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 102 A CYS 189 1_555 A SG CYS 116 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf5 B SG CYS 9 B CYS 96 1_555 B SG CYS 18 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf6 B SG CYS 12 B CYS 99 1_555 B SG CYS 23 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? disulf ? disulf7 B SG CYS 40 B CYS 127 1_555 B SG CYS 124 B CYS 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf8 B SG CYS 102 B CYS 189 1_555 B SG CYS 116 B CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 267 n n C1 C2 PGE sing 268 n n C1 H1 PGE sing 269 n n C1 H12 PGE sing 270 n n O1 HO1 PGE sing 271 n n C2 O2 PGE sing 272 n n C2 H2 PGE sing 273 n n C2 H22 PGE sing 274 n n O2 C3 PGE sing 275 n n C3 C4 PGE sing 276 n n C3 H3 PGE sing 277 n n C3 H32 PGE sing 278 n n C4 O3 PGE sing 279 n n C4 H4 PGE sing 280 n n C4 H42 PGE sing 281 n n O4 C6 PGE sing 282 n n O4 HO4 PGE sing 283 n n C6 C5 PGE sing 284 n n C6 H6 PGE sing 285 n n C6 H62 PGE sing 286 n n C5 O3 PGE sing 287 n n C5 H5 PGE sing 288 n n C5 H52 PGE sing 289 n n # _atom_sites.entry_id 8SE6 _atom_sites.fract_transf_matrix[1][1] 0.009996 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002284 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022997 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015981 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE A 1 301 217 PGE PGE . D 2 PGE A 1 302 218 PGE PGE . E 2 PGE A 1 303 219 PGE PGE . F 3 ZWA B 1 301 220 ZWA UNL . G 2 PGE B 1 302 216 PGE PGE . H 4 PG4 B 1 303 217 PG4 PG4 . I 5 HOH A 1 401 265 HOH HOH . I 5 HOH A 2 402 248 HOH HOH . I 5 HOH A 3 403 229 HOH HOH . I 5 HOH A 4 404 230 HOH HOH . I 5 HOH A 5 405 252 HOH HOH . I 5 HOH A 6 406 284 HOH HOH . I 5 HOH A 7 407 242 HOH HOH . I 5 HOH A 8 408 245 HOH HOH . I 5 HOH A 9 409 276 HOH HOH . I 5 HOH A 10 410 247 HOH HOH . I 5 HOH A 11 411 222 HOH HOH . I 5 HOH A 12 412 240 HOH HOH . I 5 HOH A 13 413 263 HOH HOH . I 5 HOH A 14 414 272 HOH HOH . I 5 HOH A 15 415 236 HOH HOH . I 5 HOH A 16 416 251 HOH HOH . I 5 HOH A 17 417 274 HOH HOH . I 5 HOH A 18 418 231 HOH HOH . I 5 HOH A 19 419 258 HOH HOH . I 5 HOH A 20 420 228 HOH HOH . I 5 HOH A 21 421 221 HOH HOH . I 5 HOH A 22 422 225 HOH HOH . I 5 HOH A 23 423 264 HOH HOH . I 5 HOH A 24 424 241 HOH HOH . I 5 HOH A 25 425 249 HOH HOH . I 5 HOH A 26 426 235 HOH HOH . I 5 HOH A 27 427 226 HOH HOH . I 5 HOH A 28 428 239 HOH HOH . I 5 HOH A 29 429 271 HOH HOH . I 5 HOH A 30 430 223 HOH HOH . I 5 HOH A 31 431 238 HOH HOH . I 5 HOH A 32 432 254 HOH HOH . I 5 HOH A 33 433 232 HOH HOH . I 5 HOH A 34 434 227 HOH HOH . I 5 HOH A 35 435 224 HOH HOH . I 5 HOH A 36 436 246 HOH HOH . I 5 HOH A 37 437 267 HOH HOH . I 5 HOH A 38 438 270 HOH HOH . I 5 HOH A 39 439 277 HOH HOH . I 5 HOH A 40 440 243 HOH HOH . I 5 HOH A 41 441 257 HOH HOH . I 5 HOH A 42 442 234 HOH HOH . I 5 HOH A 43 443 237 HOH HOH . I 5 HOH A 44 444 256 HOH HOH . I 5 HOH A 45 445 255 HOH HOH . I 5 HOH A 46 446 269 HOH HOH . I 5 HOH A 47 447 233 HOH HOH . I 5 HOH A 48 448 262 HOH HOH . I 5 HOH A 49 449 281 HOH HOH . I 5 HOH A 50 450 283 HOH HOH . I 5 HOH A 51 451 250 HOH HOH . I 5 HOH A 52 452 282 HOH HOH . I 5 HOH A 53 453 261 HOH HOH . I 5 HOH A 54 454 259 HOH HOH . I 5 HOH A 55 455 260 HOH HOH . I 5 HOH A 56 456 266 HOH HOH . I 5 HOH A 57 457 275 HOH HOH . I 5 HOH A 58 458 244 HOH HOH . I 5 HOH A 59 459 287 HOH HOH . I 5 HOH A 60 460 279 HOH HOH . I 5 HOH A 61 461 253 HOH HOH . I 5 HOH A 62 462 278 HOH HOH . I 5 HOH A 63 463 280 HOH HOH . I 5 HOH A 64 464 268 HOH HOH . I 5 HOH A 65 465 273 HOH HOH . J 5 HOH B 1 401 297 HOH HOH . J 5 HOH B 2 402 248 HOH HOH . J 5 HOH B 3 403 315 HOH HOH . J 5 HOH B 4 404 237 HOH HOH . J 5 HOH B 5 405 222 HOH HOH . J 5 HOH B 6 406 314 HOH HOH . J 5 HOH B 7 407 289 HOH HOH . J 5 HOH B 8 408 283 HOH HOH . J 5 HOH B 9 409 224 HOH HOH . J 5 HOH B 10 410 312 HOH HOH . J 5 HOH B 11 411 231 HOH HOH . J 5 HOH B 12 412 228 HOH HOH . J 5 HOH B 13 413 238 HOH HOH . J 5 HOH B 14 414 290 HOH HOH . J 5 HOH B 15 415 257 HOH HOH . J 5 HOH B 16 416 255 HOH HOH . J 5 HOH B 17 417 227 HOH HOH . J 5 HOH B 18 418 220 HOH HOH . J 5 HOH B 19 419 232 HOH HOH . J 5 HOH B 20 420 236 HOH HOH . J 5 HOH B 21 421 249 HOH HOH . J 5 HOH B 22 422 294 HOH HOH . J 5 HOH B 23 423 256 HOH HOH . J 5 HOH B 24 424 271 HOH HOH . J 5 HOH B 25 425 233 HOH HOH . J 5 HOH B 26 426 239 HOH HOH . J 5 HOH B 27 427 278 HOH HOH . J 5 HOH B 28 428 234 HOH HOH . J 5 HOH B 29 429 254 HOH HOH . J 5 HOH B 30 430 218 HOH HOH . J 5 HOH B 31 431 307 HOH HOH . J 5 HOH B 32 432 246 HOH HOH . J 5 HOH B 33 433 230 HOH HOH . J 5 HOH B 34 434 286 HOH HOH . J 5 HOH B 35 435 229 HOH HOH . J 5 HOH B 36 436 219 HOH HOH . J 5 HOH B 37 437 270 HOH HOH . J 5 HOH B 38 438 272 HOH HOH . J 5 HOH B 39 439 284 HOH HOH . J 5 HOH B 40 440 241 HOH HOH . J 5 HOH B 41 441 269 HOH HOH . J 5 HOH B 42 442 251 HOH HOH . J 5 HOH B 43 443 245 HOH HOH . J 5 HOH B 44 444 301 HOH HOH . J 5 HOH B 45 445 259 HOH HOH . J 5 HOH B 46 446 275 HOH HOH . J 5 HOH B 47 447 302 HOH HOH . J 5 HOH B 48 448 279 HOH HOH . J 5 HOH B 49 449 266 HOH HOH . J 5 HOH B 50 450 225 HOH HOH . J 5 HOH B 51 451 273 HOH HOH . J 5 HOH B 52 452 223 HOH HOH . J 5 HOH B 53 453 274 HOH HOH . J 5 HOH B 54 454 299 HOH HOH . J 5 HOH B 55 455 258 HOH HOH . J 5 HOH B 56 456 242 HOH HOH . J 5 HOH B 57 457 313 HOH HOH . J 5 HOH B 58 458 244 HOH HOH . J 5 HOH B 59 459 235 HOH HOH . J 5 HOH B 60 460 298 HOH HOH . J 5 HOH B 61 461 250 HOH HOH . J 5 HOH B 62 462 226 HOH HOH . J 5 HOH B 63 463 247 HOH HOH . J 5 HOH B 64 464 293 HOH HOH . J 5 HOH B 65 465 253 HOH HOH . J 5 HOH B 66 466 221 HOH HOH . J 5 HOH B 67 467 281 HOH HOH . J 5 HOH B 68 468 263 HOH HOH . J 5 HOH B 69 469 264 HOH HOH . J 5 HOH B 70 470 276 HOH HOH . J 5 HOH B 71 471 277 HOH HOH . J 5 HOH B 72 472 243 HOH HOH . J 5 HOH B 73 473 311 HOH HOH . J 5 HOH B 74 474 262 HOH HOH . J 5 HOH B 75 475 265 HOH HOH . J 5 HOH B 76 476 295 HOH HOH . J 5 HOH B 77 477 310 HOH HOH . J 5 HOH B 78 478 240 HOH HOH . J 5 HOH B 79 479 291 HOH HOH . J 5 HOH B 80 480 268 HOH HOH . J 5 HOH B 81 481 252 HOH HOH . J 5 HOH B 82 482 303 HOH HOH . J 5 HOH B 83 483 267 HOH HOH . J 5 HOH B 84 484 296 HOH HOH . J 5 HOH B 85 485 260 HOH HOH . J 5 HOH B 86 486 305 HOH HOH . J 5 HOH B 87 487 285 HOH HOH . J 5 HOH B 88 488 292 HOH HOH . J 5 HOH B 89 489 280 HOH HOH . J 5 HOH B 90 490 288 HOH HOH . J 5 HOH B 91 491 261 HOH HOH . J 5 HOH B 92 492 308 HOH HOH . J 5 HOH B 93 493 304 HOH HOH . J 5 HOH B 94 494 282 HOH HOH . J 5 HOH B 95 495 306 HOH HOH . J 5 HOH B 96 496 300 HOH HOH . J 5 HOH B 97 497 309 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 2 6.267 -37.29 27.127 1 36.43 ? C1 PGE 302 A 1 HETATM 2 O O1 PGE . . . D 2 5.291 -37.663 28.093 1 44.68 ? O1 PGE 302 A 1 HETATM 3 C C2 PGE . . . D 2 5.842 -35.985 26.493 1 30.11 ? C2 PGE 302 A 1 HETATM 4 O O2 PGE . . . D 2 6.312 -35.911 25.161 1 37.44 ? O2 PGE 302 A 1 HETATM 5 C C3 PGE . . . D 2 6.041 -34.667 24.534 1 39.49 ? C3 PGE 302 A 1 HETATM 6 C C4 PGE . . . D 2 4.568 -34.593 24.167 1 39.82 ? C4 PGE 302 A 1 HETATM 7 O O4 PGE . . . D 2 0.781 -32.783 25.572 1 51.89 ? O4 PGE 302 A 1 HETATM 8 C C6 PGE . . . D 2 2.095 -33.326 25.545 1 37.04 ? C6 PGE 302 A 1 HETATM 9 C C5 PGE . . . D 2 2.679 -33.178 24.153 1 38.98 ? C5 PGE 302 A 1 HETATM 10 O O3 PGE . . . D 2 4.094 -33.264 24.229 1 48.01 ? O3 PGE 302 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 10 #