data_8SFS # _model_server_result.job_id a86g0xy97LWSAGL6o88HJg _model_server_result.datetime_utc '2024-10-10 08:19:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sfs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 8SFS # _exptl.entry_id 8SFS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 18.038 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AMMONIUM ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8SFS _cell.length_a 131.772 _cell.length_b 131.772 _cell.length_c 153.58 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SFS _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,J,K,NA 1 1 C,V,W,X,Y,Z,AA,BA,CA,DA,PA 1 2 B,D,L,M,N,O,P,Q,R,S,T,U,EA,FA,GA,HA,IA,JA,KA,LA,MA,OA,QA 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z+1/3 -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 131.772 0 51.193333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 Y N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 26 D CYS 26 1_555 C SG CYS 100 D CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf2 D SG CYS 26 C CYS 26 1_555 D SG CYS 100 C CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? covale ? covale1 A C PHE 65 A PHE 64 1_555 A N1 CR2 66 A CR2 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale2 A C3 CR2 66 A CR2 66 1_555 A N VAL 67 A VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? covale ? covale3 A O2 CR2 66 A CR2 66 1_555 A NH2 ARG 95 A ARG 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale4 B C PHE 65 B PHE 64 1_555 B N1 CR2 66 B CR2 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? covale ? covale5 B C3 CR2 66 B CR2 66 1_555 B N VAL 67 B VAL 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? metalc ? metalc1 B OD2 ASP 20 B ASP 19 1_555 T NA NA . B NA 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.133 ? metalc ? metalc2 B OE1 GLU 123 B GLU 124 1_555 U NA NA . B NA 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.733 ? metalc ? metalc3 OA O HOH . B HOH 423 1_555 MA NA NA . C NA 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.066 ? metalc ? metalc4 HA O1 GOL . C GOL 204 1_555 MA NA NA . C NA 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.036 ? # _chem_comp.formula 'H4 N 1' _chem_comp.formula_weight 18.038 _chem_comp.id NH4 _chem_comp.mon_nstd_flag . _chem_comp.name 'AMMONIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N HN1 NH4 sing 284 n n N HN2 NH4 sing 285 n n N HN3 NH4 sing 286 n n N HN4 NH4 sing 287 n n # _atom_sites.entry_id 8SFS _atom_sites.fract_transf_matrix[1][1] 0.007589 _atom_sites.fract_transf_matrix[1][2] 0.004381 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008763 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006511 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NH4 A 1 301 7 NH4 NH4 . F 3 NH4 A 1 302 14 NH4 NH4 . G 3 NH4 A 1 303 19 NH4 NH4 . H 3 NH4 A 1 304 21 NH4 NH4 . I 3 NH4 A 1 305 24 NH4 NH4 . J 4 GOL A 1 306 19 GOL GOL . K 5 CL A 1 307 8 CL CL . L 6 SO4 B 1 301 7 SO4 SO4 . M 3 NH4 B 1 302 10 NH4 NH4 . N 3 NH4 B 1 303 15 NH4 NH4 . O 3 NH4 B 1 304 16 NH4 NH4 . P 3 NH4 B 1 305 23 NH4 NH4 . Q 3 NH4 B 1 306 25 NH4 NH4 . R 5 CL B 1 307 4 CL CL . S 5 CL B 1 308 7 CL CL . T 7 NA B 1 309 2 NA NA . U 7 NA B 1 310 4 NA NA . V 6 SO4 D 1 201 11 SO4 SO4 . W 6 SO4 D 1 202 16 SO4 SO4 . X 6 SO4 D 1 203 20 SO4 SO4 . Y 3 NH4 D 1 204 13 NH4 NH4 . Z 4 GOL D 1 205 11 GOL GOL . AA 4 GOL D 1 206 14 GOL GOL . BA 4 GOL D 1 207 16 GOL GOL . CA 4 GOL D 1 208 17 GOL GOL . DA 4 GOL D 1 209 18 GOL GOL . EA 6 SO4 C 1 201 12 SO4 SO4 . FA 6 SO4 C 1 202 18 SO4 SO4 . GA 6 SO4 C 1 203 19 SO4 SO4 . HA 4 GOL C 1 204 4 GOL GOL . IA 4 GOL C 1 205 8 GOL GOL . JA 4 GOL C 1 206 9 GOL GOL . KA 4 GOL C 1 207 21 GOL GOL . LA 5 CL C 1 208 6 CL CL . MA 7 NA C 1 209 3 NA NA . NA 8 HOH A 1 401 138 HOH HOH . NA 8 HOH A 2 402 167 HOH HOH . NA 8 HOH A 3 403 74 HOH HOH . NA 8 HOH A 4 404 11 HOH HOH . NA 8 HOH A 5 405 87 HOH HOH . NA 8 HOH A 6 406 289 HOH HOH . NA 8 HOH A 7 407 268 HOH HOH . NA 8 HOH A 8 408 185 HOH HOH . NA 8 HOH A 9 409 32 HOH HOH . NA 8 HOH A 10 410 71 HOH HOH . NA 8 HOH A 11 411 64 HOH HOH . NA 8 HOH A 12 412 35 HOH HOH . NA 8 HOH A 13 413 256 HOH HOH . NA 8 HOH A 14 414 96 HOH HOH . NA 8 HOH A 15 415 86 HOH HOH . NA 8 HOH A 16 416 140 HOH HOH . NA 8 HOH A 17 417 292 HOH HOH . NA 8 HOH A 18 418 291 HOH HOH . NA 8 HOH A 19 419 180 HOH HOH . NA 8 HOH A 20 420 69 HOH HOH . NA 8 HOH A 21 421 165 HOH HOH . NA 8 HOH A 22 422 182 HOH HOH . NA 8 HOH A 23 423 73 HOH HOH . NA 8 HOH A 24 424 312 HOH HOH . NA 8 HOH A 25 425 205 HOH HOH . NA 8 HOH A 26 426 72 HOH HOH . NA 8 HOH A 27 427 8 HOH HOH . NA 8 HOH A 28 428 33 HOH HOH . NA 8 HOH A 29 429 270 HOH HOH . NA 8 HOH A 30 430 95 HOH HOH . NA 8 HOH A 31 431 172 HOH HOH . NA 8 HOH A 32 432 12 HOH HOH . NA 8 HOH A 33 433 94 HOH HOH . NA 8 HOH A 34 434 244 HOH HOH . NA 8 HOH A 35 435 90 HOH HOH . NA 8 HOH A 36 436 293 HOH HOH . NA 8 HOH A 37 437 88 HOH HOH . NA 8 HOH A 38 438 34 HOH HOH . NA 8 HOH A 39 439 166 HOH HOH . NA 8 HOH A 40 440 193 HOH HOH . NA 8 HOH A 41 441 110 HOH HOH . NA 8 HOH A 42 442 329 HOH HOH . NA 8 HOH A 43 443 217 HOH HOH . NA 8 HOH A 44 444 144 HOH HOH . NA 8 HOH A 45 445 14 HOH HOH . NA 8 HOH A 46 446 70 HOH HOH . NA 8 HOH A 47 447 322 HOH HOH . NA 8 HOH A 48 448 323 HOH HOH . NA 8 HOH A 49 449 104 HOH HOH . NA 8 HOH A 50 450 215 HOH HOH . NA 8 HOH A 51 451 158 HOH HOH . NA 8 HOH A 52 452 338 HOH HOH . NA 8 HOH A 53 453 141 HOH HOH . NA 8 HOH A 54 454 311 HOH HOH . NA 8 HOH A 55 455 313 HOH HOH . NA 8 HOH A 56 456 142 HOH HOH . OA 8 HOH B 1 401 296 HOH HOH . OA 8 HOH B 2 402 6 HOH HOH . OA 8 HOH B 3 403 115 HOH HOH . OA 8 HOH B 4 404 16 HOH HOH . OA 8 HOH B 5 405 159 HOH HOH . OA 8 HOH B 6 406 75 HOH HOH . OA 8 HOH B 7 407 119 HOH HOH . OA 8 HOH B 8 408 15 HOH HOH . OA 8 HOH B 9 409 290 HOH HOH . OA 8 HOH B 10 410 91 HOH HOH . OA 8 HOH B 11 411 7 HOH HOH . OA 8 HOH B 12 412 18 HOH HOH . OA 8 HOH B 13 413 45 HOH HOH . OA 8 HOH B 14 414 330 HOH HOH . OA 8 HOH B 15 415 170 HOH HOH . OA 8 HOH B 16 416 39 HOH HOH . OA 8 HOH B 17 417 20 HOH HOH . OA 8 HOH B 18 418 157 HOH HOH . OA 8 HOH B 19 419 105 HOH HOH . OA 8 HOH B 20 420 66 HOH HOH . OA 8 HOH B 21 421 43 HOH HOH . OA 8 HOH B 22 422 114 HOH HOH . OA 8 HOH B 23 423 97 HOH HOH . OA 8 HOH B 24 424 5 HOH HOH . OA 8 HOH B 25 425 30 HOH HOH . OA 8 HOH B 26 426 62 HOH HOH . OA 8 HOH B 27 427 111 HOH HOH . OA 8 HOH B 28 428 186 HOH HOH . OA 8 HOH B 29 429 21 HOH HOH . OA 8 HOH B 30 430 143 HOH HOH . OA 8 HOH B 31 431 22 HOH HOH . OA 8 HOH B 32 432 80 HOH HOH . OA 8 HOH B 33 433 76 HOH HOH . OA 8 HOH B 34 434 79 HOH HOH . OA 8 HOH B 35 435 31 HOH HOH . OA 8 HOH B 36 436 135 HOH HOH . OA 8 HOH B 37 437 202 HOH HOH . OA 8 HOH B 38 438 253 HOH HOH . OA 8 HOH B 39 439 117 HOH HOH . OA 8 HOH B 40 440 136 HOH HOH . OA 8 HOH B 41 441 190 HOH HOH . OA 8 HOH B 42 442 44 HOH HOH . OA 8 HOH B 43 443 163 HOH HOH . OA 8 HOH B 44 444 310 HOH HOH . OA 8 HOH B 45 445 319 HOH HOH . OA 8 HOH B 46 446 162 HOH HOH . OA 8 HOH B 47 447 4 HOH HOH . OA 8 HOH B 48 448 200 HOH HOH . OA 8 HOH B 49 449 121 HOH HOH . OA 8 HOH B 50 450 41 HOH HOH . OA 8 HOH B 51 451 116 HOH HOH . OA 8 HOH B 52 452 214 HOH HOH . OA 8 HOH B 53 453 13 HOH HOH . OA 8 HOH B 54 454 65 HOH HOH . OA 8 HOH B 55 455 93 HOH HOH . OA 8 HOH B 56 456 42 HOH HOH . OA 8 HOH B 57 457 339 HOH HOH . OA 8 HOH B 58 458 61 HOH HOH . OA 8 HOH B 59 459 276 HOH HOH . OA 8 HOH B 60 460 342 HOH HOH . OA 8 HOH B 61 461 345 HOH HOH . OA 8 HOH B 62 462 128 HOH HOH . OA 8 HOH B 63 463 218 HOH HOH . OA 8 HOH B 64 464 318 HOH HOH . OA 8 HOH B 65 465 321 HOH HOH . PA 8 HOH D 1 301 297 HOH HOH . PA 8 HOH D 2 302 340 HOH HOH . PA 8 HOH D 3 303 320 HOH HOH . PA 8 HOH D 4 304 198 HOH HOH . PA 8 HOH D 5 305 197 HOH HOH . PA 8 HOH D 6 306 255 HOH HOH . PA 8 HOH D 7 307 275 HOH HOH . PA 8 HOH D 8 308 125 HOH HOH . PA 8 HOH D 9 309 23 HOH HOH . PA 8 HOH D 10 310 137 HOH HOH . PA 8 HOH D 11 311 148 HOH HOH . PA 8 HOH D 12 312 102 HOH HOH . PA 8 HOH D 13 313 25 HOH HOH . PA 8 HOH D 14 314 122 HOH HOH . PA 8 HOH D 15 315 47 HOH HOH . PA 8 HOH D 16 316 24 HOH HOH . PA 8 HOH D 17 317 174 HOH HOH . PA 8 HOH D 18 318 53 HOH HOH . PA 8 HOH D 19 319 84 HOH HOH . PA 8 HOH D 20 320 146 HOH HOH . PA 8 HOH D 21 321 51 HOH HOH . PA 8 HOH D 22 322 183 HOH HOH . PA 8 HOH D 23 323 145 HOH HOH . PA 8 HOH D 24 324 213 HOH HOH . PA 8 HOH D 25 325 224 HOH HOH . PA 8 HOH D 26 326 324 HOH HOH . PA 8 HOH D 27 327 83 HOH HOH . PA 8 HOH D 28 328 230 HOH HOH . PA 8 HOH D 29 329 188 HOH HOH . PA 8 HOH D 30 330 123 HOH HOH . PA 8 HOH D 31 331 254 HOH HOH . PA 8 HOH D 32 332 133 HOH HOH . PA 8 HOH D 33 333 49 HOH HOH . PA 8 HOH D 34 334 52 HOH HOH . PA 8 HOH D 35 335 124 HOH HOH . PA 8 HOH D 36 336 26 HOH HOH . PA 8 HOH D 37 337 147 HOH HOH . PA 8 HOH D 38 338 298 HOH HOH . PA 8 HOH D 39 339 50 HOH HOH . PA 8 HOH D 40 340 48 HOH HOH . PA 8 HOH D 41 341 307 HOH HOH . PA 8 HOH D 42 342 343 HOH HOH . PA 8 HOH D 43 343 131 HOH HOH . PA 8 HOH D 44 344 192 HOH HOH . QA 8 HOH C 1 301 341 HOH HOH . QA 8 HOH C 2 302 301 HOH HOH . QA 8 HOH C 3 303 126 HOH HOH . QA 8 HOH C 4 304 327 HOH HOH . QA 8 HOH C 5 305 67 HOH HOH . QA 8 HOH C 6 306 240 HOH HOH . QA 8 HOH C 7 307 100 HOH HOH . QA 8 HOH C 8 308 55 HOH HOH . QA 8 HOH C 9 309 60 HOH HOH . QA 8 HOH C 10 310 101 HOH HOH . QA 8 HOH C 11 311 281 HOH HOH . QA 8 HOH C 12 312 130 HOH HOH . QA 8 HOH C 13 313 98 HOH HOH . QA 8 HOH C 14 314 191 HOH HOH . QA 8 HOH C 15 315 99 HOH HOH . QA 8 HOH C 16 316 27 HOH HOH . QA 8 HOH C 17 317 92 HOH HOH . QA 8 HOH C 18 318 171 HOH HOH . QA 8 HOH C 19 319 132 HOH HOH . QA 8 HOH C 20 320 59 HOH HOH . QA 8 HOH C 21 321 28 HOH HOH . QA 8 HOH C 22 322 57 HOH HOH . QA 8 HOH C 23 323 40 HOH HOH . QA 8 HOH C 24 324 58 HOH HOH . QA 8 HOH C 25 325 29 HOH HOH . QA 8 HOH C 26 326 63 HOH HOH . QA 8 HOH C 27 327 306 HOH HOH . QA 8 HOH C 28 328 300 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NH4 . . . E 3 72.671 33.09 -8.684 1 37.46 ? N NH4 301 A 1 HETATM 2 H HN1 NH4 . . . E 3 72.694 32.657 -9.561 1 44.99 ? HN1 NH4 301 A 1 HETATM 3 H HN2 NH4 . . . E 3 73.082 33.978 -8.752 1 44.99 ? HN2 NH4 301 A 1 HETATM 4 H HN3 NH4 . . . E 3 71.742 33.183 -8.386 1 44.99 ? HN3 NH4 301 A 1 HETATM 5 H HN4 NH4 . . . E 3 73.168 32.543 -8.041 1 44.99 ? HN4 NH4 301 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #