data_8SG5 # _model_server_result.job_id fdIjhM10IMOI2xyQR588bQ _model_server_result.datetime_utc '2024-11-28 17:21:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sg5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"DA","auth_seq_id":602}' # _entry.id 8SG5 # _exptl.entry_id 8SG5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 344.837 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(2-CHLOROPHENYL)(DIPHENYL)METHYL]-1H-IMIDAZOLE _entity.pdbx_number_of_molecules 24 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.01 _cell.angle_gamma 90 _cell.entry_id 8SG5 _cell.length_a 104.131 _cell.length_b 200.679 _cell.length_c 110.819 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SG5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 PISA monomeric 1 author_and_software_defined_assembly 7 PISA monomeric 1 author_and_software_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,I,J,K,L,M 1 1 B,N,O,P,Q,R 2 1 C,S,T,U,V,W 3 1 D,X,Y,Z,AA,BA 4 1 E,CA,DA,EA,FA,GA 5 1 F,HA,IA,JA,KA,LA 6 1 G,MA,NA,OA,PA,QA 7 1 H,RA,SA,TA,UA 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 K N N ? 3 L N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 IA N N ? 3 JA N N ? 3 KA N N ? 3 NA N N ? 3 OA N N ? 3 PA N N ? 3 SA N N ? 3 TA N N ? 3 UA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 420 A CYS 441 1_555 I FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc2 I FE HEM . A HEM 601 1_555 J NAN CL6 . A CL6 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? metalc ? metalc3 B SG CYS 420 B CYS 441 1_555 N FE HEM . B HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc4 N FE HEM . B HEM 601 1_555 O NAN CL6 . B CL6 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? metalc ? metalc5 C SG CYS 420 C CYS 441 1_555 S FE HEM . C HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc6 S FE HEM . C HEM 601 1_555 T NAN CL6 . C CL6 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc7 D SG CYS 420 D CYS 441 1_555 X FE HEM . D HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc8 X FE HEM . D HEM 601 1_555 Y NAN CL6 . D CL6 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc9 E SG CYS 420 E CYS 441 1_555 CA FE HEM . E HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc10 CA FE HEM . E HEM 601 1_555 DA NAN CL6 . E CL6 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc11 F SG CYS 420 F CYS 441 1_555 HA FE HEM . F HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc12 HA FE HEM . F HEM 601 1_555 IA NAN CL6 . F CL6 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc13 G SG CYS 420 G CYS 441 1_555 MA FE HEM . G HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc14 MA FE HEM . G HEM 601 1_555 NA NAN CL6 . G CL6 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc15 H SG CYS 420 H CYS 441 1_555 RA FE HEM . H HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc16 RA FE HEM . H HEM 601 1_555 SA NAN CL6 . H CL6 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? # _chem_comp.formula 'C22 H17 Cl N2' _chem_comp.formula_weight 344.837 _chem_comp.id CL6 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(2-CHLOROPHENYL)(DIPHENYL)METHYL]-1H-IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms CLOTRIMAZOLE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CLAY CAX CL6 sing 171 n n CAX CAV CL6 sing 172 n y CAX CAW CL6 doub 173 n y CAV CAT CL6 doub 174 n y CAV HAV CL6 sing 175 n n CAT CAS CL6 sing 176 n y CAT HAT CL6 sing 177 n n CAS CAU CL6 doub 178 n y CAS HAS CL6 sing 179 n n CAU CAW CL6 sing 180 n y CAU HAU CL6 sing 181 n n CAW CAR CL6 sing 182 n n CAR CAL CL6 sing 183 n n CAR CAC CL6 sing 184 n n CAR NAO CL6 sing 185 n n CAC CAA CL6 doub 186 n y CAC CAE CL6 sing 187 n y CAE CAF CL6 doub 188 n y CAE HAE CL6 sing 189 n n CAF CAD CL6 sing 190 n y CAF HAF CL6 sing 191 n n CAD CAB CL6 doub 192 n y CAD HAD CL6 sing 193 n n CAB CAA CL6 sing 194 n y CAB HAB CL6 sing 195 n n CAA HAA CL6 sing 196 n n NAO CAP CL6 sing 197 n y NAO CAM CL6 sing 198 n y CAM NAN CL6 doub 199 n y CAM HAM CL6 sing 200 n n NAN CAQ CL6 sing 201 n y CAQ CAP CL6 doub 202 n y CAQ HAQ CL6 sing 203 n n CAP HAP CL6 sing 204 n n CAL CAK CL6 sing 205 n y CAL CAJ CL6 doub 206 n y CAK CAI CL6 doub 207 n y CAK HAK CL6 sing 208 n n CAI CAG CL6 sing 209 n y CAI HAI CL6 sing 210 n n CAG CAH CL6 doub 211 n y CAG HAG CL6 sing 212 n n CAH CAJ CL6 sing 213 n y CAH HAH CL6 sing 214 n n CAJ HAJ CL6 sing 215 n n # _atom_sites.entry_id 8SG5 _atom_sites.fract_transf_matrix[1][1] 0.009603 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000337 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004983 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009029 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 HEM A 1 601 601 HEM HEM . J 3 CL6 A 1 602 602 CL6 CL6 . K 3 CL6 A 1 603 603 CL6 CL6 . L 3 CL6 A 1 604 604 CL6 CL6 . M 4 CE9 A 1 605 605 CE9 CE9 . N 2 HEM B 1 601 601 HEM HEM . O 3 CL6 B 1 602 602 CL6 CL6 . P 3 CL6 B 1 603 603 CL6 CL6 . Q 3 CL6 B 1 604 604 CL6 CL6 . R 4 CE9 B 1 605 605 CE9 CE9 . S 2 HEM C 1 601 601 HEM HEM . T 3 CL6 C 1 602 602 CL6 CL6 . U 3 CL6 C 1 603 603 CL6 CL6 . V 3 CL6 C 1 604 604 CL6 CL6 . W 4 CE9 C 1 605 605 CE9 CE9 . X 2 HEM D 1 601 601 HEM HEM . Y 3 CL6 D 1 602 602 CL6 CL6 . Z 3 CL6 D 1 603 603 CL6 CL6 . AA 3 CL6 D 1 604 604 CL6 CL6 . BA 4 CE9 D 1 605 605 CE9 CE9 . CA 2 HEM E 1 601 601 HEM HEM . DA 3 CL6 E 1 602 602 CL6 CL6 . EA 3 CL6 E 1 603 603 CL6 CL6 . FA 3 CL6 E 1 604 604 CL6 CL6 . GA 4 CE9 E 1 605 605 CE9 CE9 . HA 2 HEM F 1 601 601 HEM HEM . IA 3 CL6 F 1 602 602 CL6 CL6 . JA 3 CL6 F 1 603 603 CL6 CL6 . KA 3 CL6 F 1 604 604 CL6 CL6 . LA 4 CE9 F 1 605 605 CE9 CE9 . MA 2 HEM G 1 601 601 HEM HEM . NA 3 CL6 G 1 602 602 CL6 CL6 . OA 3 CL6 G 1 603 603 CL6 CL6 . PA 3 CL6 G 1 604 604 CL6 CL6 . QA 4 CE9 G 1 605 605 CE9 CE9 . RA 2 HEM H 1 601 601 HEM HEM . SA 3 CL6 H 1 602 602 CL6 CL6 . TA 3 CL6 H 1 603 603 CL6 CL6 . UA 3 CL6 H 1 604 604 CL6 CL6 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CLAY CL6 . . . DA 3 -32.323 -76.24 16.247 1 73.34 ? CLAY CL6 602 E 1 HETATM 2 C CAX CL6 . . . DA 3 -33.622 -76.612 17.336 1 67.08 ? CAX CL6 602 E 1 HETATM 3 C CAV CL6 . . . DA 3 -34.906 -76.515 16.831 1 61.41 ? CAV CL6 602 E 1 HETATM 4 C CAT CL6 . . . DA 3 -35.979 -76.826 17.644 1 63.98 ? CAT CL6 602 E 1 HETATM 5 C CAS CL6 . . . DA 3 -35.767 -77.227 18.939 1 67.12 ? CAS CL6 602 E 1 HETATM 6 C CAU CL6 . . . DA 3 -34.48 -77.32 19.441 1 64.89 ? CAU CL6 602 E 1 HETATM 7 C CAW CL6 . . . DA 3 -33.376 -77.012 18.655 1 65.27 ? CAW CL6 602 E 1 HETATM 8 C CAR CL6 . . . DA 3 -31.945 -77.067 19.228 1 68.14 ? CAR CL6 602 E 1 HETATM 9 C CAC CL6 . . . DA 3 -31.881 -77.458 20.721 1 69.79 ? CAC CL6 602 E 1 HETATM 10 C CAE CL6 . . . DA 3 -32.071 -78.782 21.105 1 66.13 ? CAE CL6 602 E 1 HETATM 11 C CAF CL6 . . . DA 3 -32.013 -79.148 22.439 1 67.79 ? CAF CL6 602 E 1 HETATM 12 C CAD CL6 . . . DA 3 -31.764 -78.202 23.408 1 68.29 ? CAD CL6 602 E 1 HETATM 13 C CAB CL6 . . . DA 3 -31.573 -76.888 23.045 1 68.64 ? CAB CL6 602 E 1 HETATM 14 C CAA CL6 . . . DA 3 -31.629 -76.516 21.712 1 68.49 ? CAA CL6 602 E 1 HETATM 15 N NAO CL6 . . . DA 3 -31.319 -75.704 19.021 1 68.16 ? NAO CL6 602 E 1 HETATM 16 C CAM CL6 . . . DA 3 -30.106 -75.409 18.486 1 69.63 ? CAM CL6 602 E 1 HETATM 17 N NAN CL6 . . . DA 3 -29.888 -74.118 18.393 1 70.3 ? NAN CL6 602 E 1 HETATM 18 C CAQ CL6 . . . DA 3 -31.019 -73.538 18.9 1 69.26 ? CAQ CL6 602 E 1 HETATM 19 C CAP CL6 . . . DA 3 -31.903 -74.484 19.287 1 66.24 ? CAP CL6 602 E 1 HETATM 20 C CAL CL6 . . . DA 3 -31.159 -78.185 18.506 1 69.04 ? CAL CL6 602 E 1 HETATM 21 C CAK CL6 . . . DA 3 -31.808 -79.036 17.617 1 71.16 ? CAK CL6 602 E 1 HETATM 22 C CAI CL6 . . . DA 3 -31.117 -80.045 16.972 1 70.06 ? CAI CL6 602 E 1 HETATM 23 C CAG CL6 . . . DA 3 -29.777 -80.225 17.206 1 69.45 ? CAG CL6 602 E 1 HETATM 24 C CAH CL6 . . . DA 3 -29.12 -79.406 18.093 1 67.89 ? CAH CL6 602 E 1 HETATM 25 C CAJ CL6 . . . DA 3 -29.804 -78.394 18.743 1 66.47 ? CAJ CL6 602 E 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 86 _model_server_stats.query_time_ms 450 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 25 #