data_8SGT # _model_server_result.job_id igbi-XI11gn-kuqPP_WLaw _model_server_result.datetime_utc '2024-11-09 02:29:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sgt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1003}' # _entry.id 8SGT # _exptl.entry_id 8SGT _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SGT _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SGT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 55 A CYS 20 1_555 A SG CYS 802 A CYS 792 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 B SG CYS 22 L CYS 21 1_555 B SG CYS 90 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A OE2 GLU 395 A GLU 385 1_555 E CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? metalc ? metalc2 A OE1 GLU 395 A GLU 385 1_555 F CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc3 A OE1 GLU 395 A GLU 385 1_555 G CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? metalc ? metalc4 A OE2 GLU 395 A GLU 385 1_555 G CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc5 A OD1 ASP 431 A ASP 421 1_555 D CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc6 A OD2 ASP 431 A ASP 421 1_555 D CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc7 A OD1 ASP 431 A ASP 421 1_555 E CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc8 A OD1 ASP 456 A ASP 446 1_555 F CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc9 A O ASP 457 A ASP 447 1_555 F CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc10 A OD1 ASP 457 A ASP 447 1_555 G CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc11 A O ILE 459 A ILE 449 1_555 G CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc12 A OE2 GLU 461 A GLU 451 1_555 D CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc13 A OE1 GLU 461 A GLU 451 1_555 E CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc14 A OE1 GLU 461 A GLU 451 1_555 G CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? metalc ? metalc15 A OE2 GLU 464 A GLU 454 1_555 D CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.035 ? metalc ? metalc16 A OD1 ASP 508 A ASP 498 1_555 G CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? metalc ? metalc17 A OD1 ASP 510 A ASP 500 1_555 F CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc18 A OD2 ASP 510 A ASP 500 1_555 F CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc19 A OD2 ASP 510 A ASP 500 1_555 G CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc20 A OE1 GLU 526 A GLU 516 1_555 H CA CA . A CA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc21 A OD1 ASP 588 A ASP 578 1_555 H CA CA . A CA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc22 A OD2 ASP 588 A ASP 578 1_555 I CA CA . A CA 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc23 A O GLU 590 A GLU 580 1_555 H CA CA . A CA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc24 A OE1 GLU 693 A GLU 683 1_555 H CA CA . A CA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc25 A OE2 GLU 693 A GLU 683 1_555 H CA CA . A CA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8SGT _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA A 1 1001 1001 CA CA . E 4 CA A 1 1002 1002 CA CA . F 4 CA A 1 1003 1003 CA CA . G 4 CA A 1 1004 1004 CA CA . H 4 CA A 1 1005 1005 CA CA . I 4 CA A 1 1006 1006 CA CA . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 123.32 _atom_site.Cartn_y 122.09 _atom_site.Cartn_z 73.789 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 81.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1003 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 103 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #