data_8SJX # _model_server_result.job_id oEkbevhjIzhi-sUT_K4b_g _model_server_result.datetime_utc '2024-10-25 20:19:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sjx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":308}' # _entry.id 8SJX # _exptl.entry_id 8SJX _exptl.method 'ELECTRON CRYSTALLOGRAPHY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SJX _cell.length_a 65.5 _cell.length_b 65.5 _cell.length_c 200 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SJX _symmetry.cell_setting ? _symmetry.Int_Tables_number 89 _symmetry.space_group_name_Hall 'P 4 2' _symmetry.space_group_name_H-M 'P 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 131 0 0 3 'crystal symmetry operation' 3_645 -y+1,x-1,z 0 -1 0 1 0 0 0 0 1 65.5 -65.5 0 4 'crystal symmetry operation' 4_665 y+1,-x+1,z 0 1 0 -1 0 0 0 0 1 65.5 65.5 0 5 'crystal symmetry operation' 5_755 -x+2,y,-z -1 0 0 0 1 0 0 0 -1 131 0 0 6 'crystal symmetry operation' 6_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 7 'crystal symmetry operation' 7_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 65.5 -65.5 0 8 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 65.5 65.5 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 8SJX _atom_sites.fract_transf_matrix[1][1] 0.015267 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015267 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HWP A 1 301 301 HWP LSM . C 2 HWP A 1 302 302 HWP LSM . D 2 HWP A 1 303 303 HWP LSM . E 2 HWP A 1 304 304 HWP LSM . F 2 HWP A 1 305 305 HWP LSM . G 2 HWP A 1 306 306 HWP LSM . H 2 HWP A 1 307 307 HWP LSM . I 3 CLR A 1 308 401 CLR CLR . J 4 HOH A 1 401 949 HOH HOH . J 4 HOH A 2 402 932 HOH HOH . J 4 HOH A 3 403 916 HOH HOH . J 4 HOH A 4 404 950 HOH HOH . J 4 HOH A 5 405 969 HOH HOH . J 4 HOH A 6 406 968 HOH HOH . J 4 HOH A 7 407 965 HOH HOH . J 4 HOH A 8 408 925 HOH HOH . J 4 HOH A 9 409 915 HOH HOH . J 4 HOH A 10 410 967 HOH HOH . J 4 HOH A 11 411 970 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . I 3 40.4 23.074 14.38 1 82.26 ? C1 CLR 308 A 1 HETATM 2 C C2 CLR . . . I 3 39.711 22.977 13.025 1 88.37 ? C2 CLR 308 A 1 HETATM 3 C C3 CLR . . . I 3 38.83 21.745 12.943 1 81.91 ? C3 CLR 308 A 1 HETATM 4 C C4 CLR . . . I 3 37.833 21.719 14.1 1 79.59 ? C4 CLR 308 A 1 HETATM 5 C C5 CLR . . . I 3 38.505 21.885 15.437 1 85.17 ? C5 CLR 308 A 1 HETATM 6 C C6 CLR . . . I 3 38.382 20.944 16.376 1 78.44 ? C6 CLR 308 A 1 HETATM 7 C C7 CLR . . . I 3 38.943 21.055 17.753 1 80.16 ? C7 CLR 308 A 1 HETATM 8 C C8 CLR . . . I 3 39.375 22.486 18.046 1 89.59 ? C8 CLR 308 A 1 HETATM 9 C C9 CLR . . . I 3 40.239 23.01 16.887 1 82.85 ? C9 CLR 308 A 1 HETATM 10 C C10 CLR . . . I 3 39.423 23.09 15.574 1 94.52 ? C10 CLR 308 A 1 HETATM 11 C C11 CLR . . . I 3 40.936 24.337 17.218 1 88.57 ? C11 CLR 308 A 1 HETATM 12 C C12 CLR . . . I 3 41.554 24.41 18.616 1 83.28 ? C12 CLR 308 A 1 HETATM 13 C C13 CLR . . . I 3 40.54 24.018 19.692 1 90.12 ? C13 CLR 308 A 1 HETATM 14 C C14 CLR . . . I 3 40.128 22.58 19.358 1 89.3 ? C14 CLR 308 A 1 HETATM 15 C C15 CLR . . . I 3 39.46 22.05 20.618 1 92.86 ? C15 CLR 308 A 1 HETATM 16 C C16 CLR . . . I 3 40.216 22.753 21.761 1 96.82 ? C16 CLR 308 A 1 HETATM 17 C C17 CLR . . . I 3 41.084 23.878 21.132 1 93.25 ? C17 CLR 308 A 1 HETATM 18 C C18 CLR . . . I 3 39.34 24.968 19.699 1 99.29 ? C18 CLR 308 A 1 HETATM 19 C C19 CLR . . . I 3 38.566 24.364 15.52 1 101.29 ? C19 CLR 308 A 1 HETATM 20 C C20 CLR . . . I 3 41.123 25.155 21.981 1 109.23 ? C20 CLR 308 A 1 HETATM 21 C C21 CLR . . . I 3 42.409 25.947 21.78 1 104.66 ? C21 CLR 308 A 1 HETATM 22 C C22 CLR . . . I 3 40.912 24.826 23.464 1 109.1 ? C22 CLR 308 A 1 HETATM 23 C C23 CLR . . . I 3 41.263 25.968 24.406 1 112.14 ? C23 CLR 308 A 1 HETATM 24 C C24 CLR . . . I 3 42.108 25.516 25.592 1 110.46 ? C24 CLR 308 A 1 HETATM 25 C C25 CLR . . . I 3 41.327 25.258 26.88 1 100.32 ? C25 CLR 308 A 1 HETATM 26 C C26 CLR . . . I 3 40.174 26.252 27.006 1 109.98 ? C26 CLR 308 A 1 HETATM 27 C C27 CLR . . . I 3 40.813 23.825 26.966 1 96.82 ? C27 CLR 308 A 1 HETATM 28 O O1 CLR . . . I 3 38.179 21.747 11.688 1 76.03 ? O1 CLR 308 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #