data_8SJY # _model_server_result.job_id WhVErkV69O9ejaIpDw2Qew _model_server_result.datetime_utc '2024-11-17 22:16:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sjy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":309}' # _entry.id 8SJY # _exptl.entry_id 8SJY _exptl.method 'ELECTRON CRYSTALLOGRAPHY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SJY _cell.length_a 65.5 _cell.length_b 65.5 _cell.length_c 200 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SJY _symmetry.cell_setting ? _symmetry.Int_Tables_number 89 _symmetry.space_group_name_Hall 'P 4 2' _symmetry.space_group_name_H-M 'P 4 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K 1 1 A,B,C,D,E,F,G,H,I,J,K 1 2 A,B,C,D,E,F,G,H,I,J,K 1 3 A,B,C,D,E,F,G,H,I,J,K 1 4 A,B,C,D,E,F,G,H,I,J,K 1 5 A,B,C,D,E,F,G,H,I,J,K 1 6 A,B,C,D,E,F,G,H,I,J,K 1 7 A,B,C,D,E,F,G,H,I,J,K 1 8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 131 0 0 3 'crystal symmetry operation' 3_645 -y+1,x-1,z 0 -1 0 1 0 0 0 0 1 65.5 -65.5 0 4 'crystal symmetry operation' 4_665 y+1,-x+1,z 0 1 0 -1 0 0 0 0 1 65.5 65.5 0 5 'crystal symmetry operation' 5_755 -x+2,y,-z -1 0 0 0 1 0 0 0 -1 131 0 0 6 'crystal symmetry operation' 6_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 7 'crystal symmetry operation' 7_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 65.5 -65.5 0 8 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 65.5 65.5 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 8SJY _atom_sites.fract_transf_matrix[1][1] 0.015267 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015267 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HWP A 1 301 302 HWP LSM . C 2 HWP A 1 302 303 HWP LSM . D 2 HWP A 1 303 305 HWP LSM . E 2 HWP A 1 304 306 HWP LSM . F 2 HWP A 1 305 307 HWP LSM . G 3 CLR A 1 306 401 CLR CLR . H 3 CLR A 1 307 402 CLR CLR . I 3 CLR A 1 308 403 CLR CLR . J 3 CLR A 1 309 404 CLR CLR . K 4 HOH A 1 401 912 HOH HOH . K 4 HOH A 2 402 993 HOH HOH . K 4 HOH A 3 403 930 HOH HOH . K 4 HOH A 4 404 925 HOH HOH . K 4 HOH A 5 405 983 HOH HOH . K 4 HOH A 6 406 984 HOH HOH . K 4 HOH A 7 407 981 HOH HOH . K 4 HOH A 8 408 964 HOH HOH . K 4 HOH A 9 409 949 HOH HOH . K 4 HOH A 10 410 982 HOH HOH . K 4 HOH A 11 411 980 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . J 3 48.311 34.977 36.32 1 112.21 ? C1 CLR 309 A 1 HETATM 2 C C2 CLR . . . J 3 48.413 35.585 37.716 1 94.69 ? C2 CLR 309 A 1 HETATM 3 C C3 CLR . . . J 3 49.855 35.846 38.103 1 91.68 ? C3 CLR 309 A 1 HETATM 4 C C4 CLR . . . J 3 50.564 36.67 37.03 1 97.89 ? C4 CLR 309 A 1 HETATM 5 C C5 CLR . . . J 3 50.39 36.098 35.643 1 100.21 ? C5 CLR 309 A 1 HETATM 6 C C6 CLR . . . J 3 51.438 35.585 35 1 96.96 ? C6 CLR 309 A 1 HETATM 7 C C7 CLR . . . J 3 51.381 34.992 33.635 1 91.57 ? C7 CLR 309 A 1 HETATM 8 C C8 CLR . . . J 3 50.073 35.32 32.929 1 102.87 ? C8 CLR 309 A 1 HETATM 9 C C9 CLR . . . J 3 48.872 35.095 33.858 1 111.74 ? C9 CLR 309 A 1 HETATM 10 C C10 CLR . . . J 3 48.952 35.845 35.217 1 108.78 ? C10 CLR 309 A 1 HETATM 11 C C11 CLR . . . J 3 47.588 35.38 33.071 1 105.64 ? C11 CLR 309 A 1 HETATM 12 C C12 CLR . . . J 3 47.467 34.51 31.815 1 108.13 ? C12 CLR 309 A 1 HETATM 13 C C13 CLR . . . J 3 48.632 34.772 30.863 1 104.38 ? C13 CLR 309 A 1 HETATM 14 C C14 CLR . . . J 3 49.893 34.46 31.689 1 113.47 ? C14 CLR 309 A 1 HETATM 15 C C15 CLR . . . J 3 51.023 34.429 30.674 1 102.72 ? C15 CLR 309 A 1 HETATM 16 C C16 CLR . . . J 3 50.379 33.747 29.455 1 105.2 ? C16 CLR 309 A 1 HETATM 17 C C17 CLR . . . J 3 48.842 33.781 29.665 1 104.33 ? C17 CLR 309 A 1 HETATM 18 C C18 CLR . . . J 3 48.607 36.25 30.466 1 96.66 ? C18 CLR 309 A 1 HETATM 19 C C19 CLR . . . J 3 48.219 37.192 35.164 1 92.96 ? C19 CLR 309 A 1 HETATM 20 C C20 CLR . . . J 3 48.127 33.889 28.292 1 109.53 ? C20 CLR 309 A 1 HETATM 21 C C21 CLR . . . J 3 48.795 34.848 27.303 1 89.27 ? C21 CLR 309 A 1 HETATM 22 C C22 CLR . . . J 3 46.627 34.186 28.448 1 122.22 ? C22 CLR 309 A 1 HETATM 23 C C23 CLR . . . J 3 45.74 33.85 27.252 1 112.48 ? C23 CLR 309 A 1 HETATM 24 C C24 CLR . . . J 3 46.153 32.56 26.551 1 118.18 ? C24 CLR 309 A 1 HETATM 25 C C25 CLR . . . J 3 46.216 32.646 25.026 1 104.94 ? C25 CLR 309 A 1 HETATM 26 C C26 CLR . . . J 3 47.608 32.251 24.541 1 85.41 ? C26 CLR 309 A 1 HETATM 27 C C27 CLR . . . J 3 45.167 31.763 24.356 1 108.35 ? C27 CLR 309 A 1 HETATM 28 O O1 CLR . . . J 3 49.868 36.5 39.356 1 82.4 ? O1 CLR 309 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 28 #