data_8SP8 # _model_server_result.job_id sfSWqB3loRGuhrS8AXya2w _model_server_result.datetime_utc '2024-11-04 22:35:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sp8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":709}' # _entry.id 8SP8 # _exptl.entry_id 8SP8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 28 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SP8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SP8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 S N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 JA N N ? 3 KA N N ? 3 LA N N ? 3 MA N N ? 3 OA N N ? 3 PA N N ? 3 QA N N ? 3 RA N N ? 3 SA N N ? 3 XA N N ? 3 YA N N ? 3 ZA N N ? 3 AB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 542 A ASP 542 1_555 Q CA CA . A CA 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc2 A OD2 ASP 542 A ASP 542 1_555 Q CA CA . A CA 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc3 Q CA CA . A CA 813 1_555 B OD1 ASP 542 B ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc4 Q CA CA . A CA 813 1_555 B OD2 ASP 542 B ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc5 Q CA CA . A CA 813 1_555 C OD1 ASP 542 C ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc6 Q CA CA . A CA 813 1_555 C OD2 ASP 542 C ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc7 Q CA CA . A CA 813 1_555 D OD1 ASP 542 D ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc8 Q CA CA . A CA 813 1_555 D OD2 ASP 542 D ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 POV sing 307 n n N C13 POV sing 308 n n N C14 POV sing 309 n n N C15 POV sing 310 n n P O11 POV sing 311 n n P O12 POV sing 312 n n P O13 POV sing 313 n n P O14 POV doub 314 n n C1 C2 POV sing 315 n n C1 O11 POV sing 316 n n C1 H1 POV sing 317 n n C1 H1A POV sing 318 n n C2 C3 POV sing 319 n n C2 O21 POV sing 320 n n C2 H2 POV sing 321 n n C3 O31 POV sing 322 n n C3 H3 POV sing 323 n n C3 H3A POV sing 324 n n C210 C211 POV sing 325 n n C210 C29 POV doub 326 z n C210 H210 POV sing 327 n n C310 C311 POV sing 328 n n C310 C39 POV sing 329 n n C310 H310 POV sing 330 n n C310 H31A POV sing 331 n n C11 C12 POV sing 332 n n C11 O12 POV sing 333 n n C11 H11 POV sing 334 n n C11 H11A POV sing 335 n n C211 C212 POV sing 336 n n C211 H211 POV sing 337 n n C211 H21A POV sing 338 n n C311 C312 POV sing 339 n n C311 H311 POV sing 340 n n C311 H31B POV sing 341 n n C12 H12 POV sing 342 n n C12 H12A POV sing 343 n n C212 C213 POV sing 344 n n C212 H212 POV sing 345 n n C212 H21B POV sing 346 n n C312 C313 POV sing 347 n n C312 H312 POV sing 348 n n C312 H31C POV sing 349 n n C13 H13 POV sing 350 n n C13 H13A POV sing 351 n n C13 H13B POV sing 352 n n C213 C214 POV sing 353 n n C213 H213 POV sing 354 n n C213 H21C POV sing 355 n n C313 C314 POV sing 356 n n C313 H313 POV sing 357 n n C313 H31D POV sing 358 n n C14 H14 POV sing 359 n n C14 H14A POV sing 360 n n C14 H14B POV sing 361 n n C214 C215 POV sing 362 n n C214 H214 POV sing 363 n n C214 H21D POV sing 364 n n C314 C315 POV sing 365 n n C314 H314 POV sing 366 n n C314 H31E POV sing 367 n n C15 H15 POV sing 368 n n C15 H15A POV sing 369 n n C15 H15B POV sing 370 n n C215 C216 POV sing 371 n n C215 H215 POV sing 372 n n C215 H21E POV sing 373 n n C315 C316 POV sing 374 n n C315 H315 POV sing 375 n n C315 H31F POV sing 376 n n C216 C217 POV sing 377 n n C216 H216 POV sing 378 n n C216 H21F POV sing 379 n n C316 H316 POV sing 380 n n C316 H31G POV sing 381 n n C316 H31H POV sing 382 n n C217 C218 POV sing 383 n n C217 H217 POV sing 384 n n C217 H21G POV sing 385 n n C218 H218 POV sing 386 n n C218 H21H POV sing 387 n n C218 H21J POV sing 388 n n C21 O21 POV sing 389 n n C21 C22 POV sing 390 n n C21 O22 POV doub 391 n n C22 C23 POV sing 392 n n C22 H22 POV sing 393 n n C22 H22A POV sing 394 n n C23 C24 POV sing 395 n n C23 H23 POV sing 396 n n C23 H23A POV sing 397 n n C24 C25 POV sing 398 n n C24 H24 POV sing 399 n n C24 H24A POV sing 400 n n C25 C26 POV sing 401 n n C25 H25 POV sing 402 n n C25 H25A POV sing 403 n n C26 C27 POV sing 404 n n C26 H26 POV sing 405 n n C26 H26A POV sing 406 n n C27 C28 POV sing 407 n n C27 H27 POV sing 408 n n C27 H27A POV sing 409 n n C28 C29 POV sing 410 n n C28 H28 POV sing 411 n n C28 H28A POV sing 412 n n C29 H29 POV sing 413 n n C31 O31 POV sing 414 n n C31 C32 POV sing 415 n n C31 O32 POV doub 416 n n C32 C33 POV sing 417 n n C32 H32 POV sing 418 n n C32 H32A POV sing 419 n n C33 C34 POV sing 420 n n C33 H33 POV sing 421 n n C33 H33A POV sing 422 n n C34 C35 POV sing 423 n n C34 H34 POV sing 424 n n C34 H34A POV sing 425 n n C35 C36 POV sing 426 n n C35 H35 POV sing 427 n n C35 H35A POV sing 428 n n C36 C37 POV sing 429 n n C36 H36 POV sing 430 n n C36 H36A POV sing 431 n n C37 C38 POV sing 432 n n C37 H37 POV sing 433 n n C37 H37A POV sing 434 n n C38 C39 POV sing 435 n n C38 H38 POV sing 436 n n C38 H38A POV sing 437 n n C39 H39 POV sing 438 n n C39 H39A POV sing 439 n n # _atom_sites.entry_id 8SP8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Y01 A 1 801 801 Y01 Y01 . F 2 Y01 A 1 802 802 Y01 Y01 . G 2 Y01 A 1 803 803 Y01 Y01 . H 3 POV A 1 804 805 POV POV . I 3 POV A 1 805 806 POV POV . J 3 POV A 1 806 807 POV POV . K 3 POV A 1 807 809 POV POV . L 4 I8E A 1 808 902 I8E THC . M 3 POV A 1 809 808 POV POV . N 3 POV A 1 810 810 POV POV . O 3 POV A 1 811 804 POV POV . P 4 I8E A 1 812 901 I8E THC . Q 5 CA A 1 813 901 CA CA . R 6 CL A 1 814 902 CL CL . S 3 POV B 1 701 804 POV POV . T 4 I8E B 1 702 901 I8E THC . U 2 Y01 B 1 703 801 Y01 Y01 . V 2 Y01 B 1 704 802 Y01 Y01 . W 2 Y01 B 1 705 803 Y01 Y01 . X 3 POV B 1 706 805 POV POV . Y 3 POV B 1 707 806 POV POV . Z 3 POV B 1 708 807 POV POV . AA 3 POV B 1 709 809 POV POV . BA 4 I8E B 1 710 902 I8E THC . CA 3 POV B 1 711 808 POV POV . DA 3 POV B 1 712 810 POV POV . EA 3 POV C 1 701 804 POV POV . FA 4 I8E C 1 702 901 I8E THC . GA 2 Y01 C 1 703 801 Y01 Y01 . HA 2 Y01 C 1 704 802 Y01 Y01 . IA 2 Y01 C 1 705 803 Y01 Y01 . JA 3 POV C 1 706 805 POV POV . KA 3 POV C 1 707 806 POV POV . LA 3 POV C 1 708 807 POV POV . MA 3 POV C 1 709 809 POV POV . NA 4 I8E C 1 710 902 I8E THC . OA 3 POV C 1 711 808 POV POV . PA 3 POV C 1 712 810 POV POV . QA 3 POV D 1 701 808 POV POV . RA 3 POV D 1 702 810 POV POV . SA 3 POV D 1 703 804 POV POV . TA 4 I8E D 1 704 901 I8E THC . UA 2 Y01 D 1 705 801 Y01 Y01 . VA 2 Y01 D 1 706 802 Y01 Y01 . WA 2 Y01 D 1 707 803 Y01 Y01 . XA 3 POV D 1 708 805 POV POV . YA 3 POV D 1 709 806 POV POV . ZA 3 POV D 1 710 807 POV POV . AB 3 POV D 1 711 809 POV POV . BB 4 I8E D 1 712 902 I8E THC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 POV . . . AA 3 143.978 131.13 138.555 1 35.75 ? C2 POV 709 B 1 HETATM 2 C C210 POV . . . AA 3 140.198 126.271 128.942 1 35.75 ? C210 POV 709 B 1 HETATM 3 C C211 POV . . . AA 3 138.728 126.567 129.045 1 35.75 ? C211 POV 709 B 1 HETATM 4 C C212 POV . . . AA 3 137.842 125.512 128.424 1 35.75 ? C212 POV 709 B 1 HETATM 5 C C213 POV . . . AA 3 137.718 125.632 126.93 1 35.75 ? C213 POV 709 B 1 HETATM 6 C C214 POV . . . AA 3 136.659 124.734 126.337 1 35.75 ? C214 POV 709 B 1 HETATM 7 C C215 POV . . . AA 3 136.947 123.273 126.461 1 35.75 ? C215 POV 709 B 1 HETATM 8 C C216 POV . . . AA 3 135.858 122.548 127.135 1 35.75 ? C216 POV 709 B 1 HETATM 9 C C21 POV . . . AA 3 144.857 129.054 137.832 1 35.75 ? C21 POV 709 B 1 HETATM 10 O O21 POV . . . AA 3 144.32 130.222 137.482 1 35.75 ? O21 POV 709 B 1 HETATM 11 C C22 POV . . . AA 3 145.165 128.207 136.632 1 35.75 ? C22 POV 709 B 1 HETATM 12 O O22 POV . . . AA 3 145.063 128.729 138.97 1 35.75 ? O22 POV 709 B 1 HETATM 13 C C23 POV . . . AA 3 144.577 128.737 135.332 1 35.75 ? C23 POV 709 B 1 HETATM 14 C C24 POV . . . AA 3 144.787 127.767 134.19 1 35.75 ? C24 POV 709 B 1 HETATM 15 C C25 POV . . . AA 3 144.418 128.318 132.827 1 35.75 ? C25 POV 709 B 1 HETATM 16 C C26 POV . . . AA 3 142.937 128.315 132.507 1 35.75 ? C26 POV 709 B 1 HETATM 17 C C27 POV . . . AA 3 142.653 127.684 131.16 1 35.75 ? C27 POV 709 B 1 HETATM 18 C C28 POV . . . AA 3 141.233 127.848 130.657 1 35.75 ? C28 POV 709 B 1 HETATM 19 C C29 POV . . . AA 3 141.083 127.464 129.202 1 35.75 ? C29 POV 709 B 1 HETATM 20 H H29 POV . . . AA 3 141.964 127.278 128.824 1 35.75 ? H29 POV 709 B 1 HETATM 21 H H31A POV . . . AA 3 140.38 125.93 128.047 1 35.75 ? H31A POV 709 B 1 HETATM 22 H H210 POV . . . AA 3 140.428 125.561 129.573 1 35.75 ? H210 POV 709 B 1 HETATM 23 H H211 POV . . . AA 3 138.488 126.686 129.983 1 35.75 ? H211 POV 709 B 1 HETATM 24 H H21A POV . . . AA 3 138.563 127.416 128.596 1 35.75 ? H21A POV 709 B 1 HETATM 25 H H22 POV . . . AA 3 146.138 128.148 136.543 1 35.75 ? H22 POV 709 B 1 HETATM 26 H H212 POV . . . AA 3 138.204 124.631 128.635 1 35.75 ? H212 POV 709 B 1 HETATM 27 H H22A POV . . . AA 3 144.815 127.309 136.797 1 35.75 ? H22A POV 709 B 1 HETATM 28 H H21B POV . . . AA 3 136.949 125.561 128.812 1 35.75 ? H21B POV 709 B 1 HETATM 29 H H23 POV . . . AA 3 143.62 128.908 135.443 1 35.75 ? H23 POV 709 B 1 HETATM 30 H H213 POV . . . AA 3 137.512 126.56 126.704 1 35.75 ? H213 POV 709 B 1 HETATM 31 H H23A POV . . . AA 3 144.994 129.593 135.112 1 35.75 ? H23A POV 709 B 1 HETATM 32 H H21C POV . . . AA 3 138.578 125.418 126.523 1 35.75 ? H21C POV 709 B 1 HETATM 33 H H24 POV . . . AA 3 145.726 127.494 134.176 1 35.75 ? H24 POV 709 B 1 HETATM 34 H H214 POV . . . AA 3 135.799 124.917 126.763 1 35.75 ? H214 POV 709 B 1 HETATM 35 H H24A POV . . . AA 3 144.267 126.957 134.363 1 35.75 ? H24A POV 709 B 1 HETATM 36 H H21D POV . . . AA 3 136.552 124.942 125.39 1 35.75 ? H21D POV 709 B 1 HETATM 37 H H25 POV . . . AA 3 144.753 129.233 132.754 1 35.75 ? H25 POV 709 B 1 HETATM 38 H H215 POV . . . AA 3 137.056 122.894 125.568 1 35.75 ? H215 POV 709 B 1 HETATM 39 H H25A POV . . . AA 3 144.886 127.793 132.148 1 35.75 ? H25A POV 709 B 1 HETATM 40 H H21E POV . . . AA 3 137.78 123.128 126.948 1 35.75 ? H21E POV 709 B 1 HETATM 41 H H26 POV . . . AA 3 142.447 127.836 133.204 1 35.75 ? H26 POV 709 B 1 HETATM 42 H H216 POV . . . AA 3 136.094 121.602 127.209 1 35.75 ? H216 POV 709 B 1 HETATM 43 H H26A POV . . . AA 3 142.609 129.237 132.506 1 35.75 ? H26A POV 709 B 1 HETATM 44 H H21F POV . . . AA 3 135.703 122.907 128.031 1 35.75 ? H21F POV 709 B 1 HETATM 45 H H31H POV . . . AA 3 135.032 122.632 126.621 1 35.75 ? H31H POV 709 B 1 HETATM 46 H H27 POV . . . AA 3 143.27 128.068 130.506 1 35.75 ? H27 POV 709 B 1 HETATM 47 H H27A POV . . . AA 3 142.859 126.73 131.211 1 35.75 ? H27A POV 709 B 1 HETATM 48 H H28 POV . . . AA 3 140.626 127.303 131.195 1 35.75 ? H28 POV 709 B 1 HETATM 49 H H28A POV . . . AA 3 140.957 128.778 130.777 1 35.75 ? H28A POV 709 B 1 HETATM 50 H H39A POV . . . AA 3 140.728 128.229 128.715 1 35.75 ? H39A POV 709 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 65 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 50 #