data_8SPD # _model_server_result.job_id U2VXnkM8d-3OqBEFz9TSug _model_server_result.datetime_utc '2024-11-28 18:06:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8spd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 8SPD # _exptl.entry_id 8SPD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 344.837 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(2-CHLOROPHENYL)(DIPHENYL)METHYL]-1H-IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SPD _cell.length_a 77.178 _cell.length_b 101.792 _cell.length_c 125.691 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SPD _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 421 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C NAN CL6 . A CL6 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? # _chem_comp.formula 'C22 H17 Cl N2' _chem_comp.formula_weight 344.837 _chem_comp.id CL6 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(2-CHLOROPHENYL)(DIPHENYL)METHYL]-1H-IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms CLOTRIMAZOLE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CLAY CAX CL6 sing 70 n n CAX CAV CL6 sing 71 n y CAX CAW CL6 doub 72 n y CAV CAT CL6 doub 73 n y CAV HAV CL6 sing 74 n n CAT CAS CL6 sing 75 n y CAT HAT CL6 sing 76 n n CAS CAU CL6 doub 77 n y CAS HAS CL6 sing 78 n n CAU CAW CL6 sing 79 n y CAU HAU CL6 sing 80 n n CAW CAR CL6 sing 81 n n CAR CAL CL6 sing 82 n n CAR CAC CL6 sing 83 n n CAR NAO CL6 sing 84 n n CAC CAA CL6 doub 85 n y CAC CAE CL6 sing 86 n y CAE CAF CL6 doub 87 n y CAE HAE CL6 sing 88 n n CAF CAD CL6 sing 89 n y CAF HAF CL6 sing 90 n n CAD CAB CL6 doub 91 n y CAD HAD CL6 sing 92 n n CAB CAA CL6 sing 93 n y CAB HAB CL6 sing 94 n n CAA HAA CL6 sing 95 n n NAO CAP CL6 sing 96 n y NAO CAM CL6 sing 97 n y CAM NAN CL6 doub 98 n y CAM HAM CL6 sing 99 n n NAN CAQ CL6 sing 100 n y CAQ CAP CL6 doub 101 n y CAQ HAQ CL6 sing 102 n n CAP HAP CL6 sing 103 n n CAL CAK CL6 sing 104 n y CAL CAJ CL6 doub 105 n y CAK CAI CL6 doub 106 n y CAK HAK CL6 sing 107 n n CAI CAG CL6 sing 108 n y CAI HAI CL6 sing 109 n n CAG CAH CL6 doub 110 n y CAG HAG CL6 sing 111 n n CAH CAJ CL6 sing 112 n y CAH HAH CL6 sing 113 n n CAJ HAJ CL6 sing 114 n n # _atom_sites.entry_id 8SPD _atom_sites.fract_transf_matrix[1][1] 0.012957 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007956 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 601 HEM HEM . C 3 CL6 A 1 602 602 CL6 CL6 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CLAY CL6 . . . C 3 19.074 30.335 6.782 1 103.4 ? CLAY CL6 602 A 1 HETATM 2 C CAX CL6 . . . C 3 20.808 30.386 6.824 1 92.04 ? CAX CL6 602 A 1 HETATM 3 C CAV CL6 . . . C 3 21.466 30.226 5.617 1 91.32 ? CAV CL6 602 A 1 HETATM 4 C CAT CL6 . . . C 3 22.846 30.273 5.585 1 89.85 ? CAT CL6 602 A 1 HETATM 5 C CAS CL6 . . . C 3 23.553 30.477 6.742 1 89.44 ? CAS CL6 602 A 1 HETATM 6 C CAU CL6 . . . C 3 22.891 30.637 7.948 1 82.51 ? CAU CL6 602 A 1 HETATM 7 C CAW CL6 . . . C 3 21.504 30.594 8.021 1 87.14 ? CAW CL6 602 A 1 HETATM 8 C CAR CL6 . . . C 3 20.764 30.726 9.38 1 89.06 ? CAR CL6 602 A 1 HETATM 9 C CAC CL6 . . . C 3 21.696 30.73 10.612 1 91.88 ? CAC CL6 602 A 1 HETATM 10 C CAE CL6 . . . C 3 22.516 31.821 10.887 1 86.19 ? CAE CL6 602 A 1 HETATM 11 C CAF CL6 . . . C 3 23.322 31.835 12.012 1 95.17 ? CAF CL6 602 A 1 HETATM 12 C CAD CL6 . . . C 3 23.324 30.766 12.878 1 103.27 ? CAD CL6 602 A 1 HETATM 13 C CAB CL6 . . . C 3 22.522 29.678 12.621 1 99.57 ? CAB CL6 602 A 1 HETATM 14 C CAA CL6 . . . C 3 21.713 29.657 11.497 1 86.66 ? CAA CL6 602 A 1 HETATM 15 N NAO CL6 . . . C 3 19.814 29.549 9.519 1 86.61 ? NAO CL6 602 A 1 HETATM 16 C CAM CL6 . . . C 3 18.55 29.549 10.013 1 80.09 ? CAM CL6 602 A 1 HETATM 17 N NAN CL6 . . . C 3 17.985 28.363 9.984 1 81.92 ? NAN CL6 602 A 1 HETATM 18 C CAQ CL6 . . . C 3 18.936 27.541 9.442 1 83.44 ? CAQ CL6 602 A 1 HETATM 19 C CAP CL6 . . . C 3 20.054 28.242 9.153 1 85.22 ? CAP CL6 602 A 1 HETATM 20 C CAL CL6 . . . C 3 20.015 32.079 9.416 1 79.03 ? CAL CL6 602 A 1 HETATM 21 C CAK CL6 . . . C 3 20.063 32.951 8.333 1 78.69 ? CAK CL6 602 A 1 HETATM 22 C CAI CL6 . . . C 3 19.444 34.189 8.39 1 77.73 ? CAI CL6 602 A 1 HETATM 23 C CAG CL6 . . . C 3 18.77 34.576 9.524 1 81.08 ? CAG CL6 602 A 1 HETATM 24 C CAH CL6 . . . C 3 18.712 33.728 10.605 1 80.44 ? CAH CL6 602 A 1 HETATM 25 C CAJ CL6 . . . C 3 19.328 32.489 10.555 1 81.24 ? CAJ CL6 602 A 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #