data_8SPE
#
_model_server_result.job_id            aayop4WBsTinFFuu31UxNA 
_model_server_result.datetime_utc      '2025-04-04 12:29:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8spe 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"LA","auth_seq_id":201}' 
#
_entry.id    8SPE 
#
_exptl.entry_id    8SPE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8SPE 
_cell.length_a            141.355 
_cell.length_b            141.355 
_cell.length_c            110.191 
_cell.Z_PDB               108 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SPE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
? tetrameric 4 author_defined_assembly 3 
? tetrameric 4 author_defined_assembly 4 
? tetrameric 4 author_defined_assembly 5 
? tetrameric 4 author_defined_assembly 6 
? tetrameric 4 author_defined_assembly 7 
? tetrameric 4 author_defined_assembly 8 
? tetrameric 4 author_defined_assembly 9 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,KA,LA,MA,NA,OA,PA,AB,BB,CB,DB 1 1 
E,F,G,H,EB,FB 2 1 
I,J,K,L,GB,HB 3 1 
M,N,O,P,QA,RA,SA,TA,UA,VA,IB,JB,KB,LB 4 1 
Q,R,S,T,WA,XA,MB,NB,OB 5 1 
U,V,W,X,PB 6 1 
Y,Z,AA,BA,QB 7 1 
CA,DA,EA,FA,YA,RB,SB 8 1 
GA,HA,IA,JA,ZA,TB 9 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 KA N N 
? 2 LA N N 
? 2 MA N N 
? 2 OA N N 
? 2 SA N N 
? 2 UA N N 
? 2 WA N N 
? 2 YA N N 
? 2 ZA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OD1 ASP 37 B ASP 84 1_555 KA ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? 
metalc ? metalc2 B OD2 ASP 37 B ASP 84 1_555 KA ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc3 KA ZN ZN . B ZN 201 3_555 Y OD2 ASP 55 Y ASP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
metalc ? metalc4 KA ZN ZN . B ZN 201 2_555 BA OE2 GLU 22 b GLU 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc5 C O GLY 1 C GLY 48 1_555 MA ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? 
metalc ? metalc6 C OD2 ASP 6 C ASP 53 1_555 MA ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? 
metalc ? metalc7 C OE2 GLU 22 C GLU 69 1_555 LA ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc8 LA ZN ZN . C ZN 201 1_555 E OD2 ASP 55 Q ASP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc9 MA ZN ZN . C ZN 202 1_555 CB O HOH . C HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? 
metalc ? metalc10 MA ZN ZN . C ZN 202 1_555 RB O HOH . d HOH 201 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? 
metalc ? metalc11 D OD1 ASP 37 D ASP 84 1_555 OA ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc12 D OD1 ASP 39 D ASP 86 1_555 OA ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
metalc ? metalc13 OA ZN ZN . D ZN 201 1_555 O OD2 ASP 39 I ASP 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc14 N OD1 ASP 37 F ASP 84 1_555 YA ZN ZN . c ZN 201 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? 
metalc ? metalc15 N OD2 ASP 37 F ASP 84 1_555 YA ZN ZN . c ZN 201 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc16 O OE2 GLU 22 I GLU 69 1_555 SA ZN ZN . I ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? 
metalc ? metalc17 SA ZN ZN . I ZN 201 1_555 P OE2 GLU 22 J GLU 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? 
metalc ? metalc18 SA ZN ZN . I ZN 201 1_556 U OD2 ASP 55 O ASP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? 
metalc ? metalc19 P OD1 ASP 37 J ASP 84 1_555 UA ZN ZN . J ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc20 P OD2 ASP 39 J ASP 86 1_555 UA ZN ZN . J ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? 
metalc ? metalc21 S O GLY 1 M GLY 48 1_555 WA ZN ZN . M ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
metalc ? metalc22 S OD2 ASP 6 M ASP 53 1_555 WA ZN ZN . M ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
metalc ? metalc23 WA ZN ZN . M ZN 201 1_555 NB O HOH . M HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc24 CA OE2 GLU 22 c GLU 69 1_555 YA ZN ZN . c ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc25 YA ZN ZN . c ZN 201 3_544 FA OD2 ASP 55 f ASP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? 
metalc ? metalc26 HA OD2 ASP 37 h ASP 84 1_555 ZA ZN ZN . h ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? 
metalc ? metalc27 HA OD2 ASP 39 h ASP 86 1_555 ZA ZN ZN . h ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8SPE 
_atom_sites.fract_transf_matrix[1][1]    0.007074 
_atom_sites.fract_transf_matrix[1][2]    0.004084 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008169 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009075 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
KA 2 ZN B 1 201 1 ZN ZN . 
LA 2 ZN C 1 201 3 ZN ZN . 
MA 2 ZN C 1 202 11 ZN ZN . 
NA 3 EDO C 1 203 2 EDO EDO . 
OA 2 ZN D 1 201 5 ZN ZN . 
PA 3 EDO D 1 202 7 EDO EDO . 
QA 4 PEG F 1 201 201 PEG PEG . 
RA 3 EDO F 1 202 5 EDO EDO . 
SA 2 ZN I 1 201 2 ZN ZN . 
TA 3 EDO I 1 202 4 EDO EDO . 
UA 2 ZN J 1 201 7 ZN ZN . 
VA 3 EDO J 1 202 3 EDO EDO . 
WA 2 ZN M 1 201 12 ZN ZN . 
XA 3 EDO N 1 201 1 EDO EDO . 
YA 2 ZN c 1 201 6 ZN ZN . 
ZA 2 ZN h 1 201 10 ZN ZN . 
AB 5 HOH A 1 201 30 HOH HOH . 
AB 5 HOH A 2 202 29 HOH HOH . 
BB 5 HOH B 1 301 31 HOH HOH . 
BB 5 HOH B 2 302 19 HOH HOH . 
BB 5 HOH B 3 303 3 HOH HOH . 
BB 5 HOH B 4 304 27 HOH HOH . 
BB 5 HOH B 5 305 32 HOH HOH . 
CB 5 HOH C 1 301 6 HOH HOH . 
CB 5 HOH C 2 302 39 HOH HOH . 
CB 5 HOH C 3 303 23 HOH HOH . 
CB 5 HOH C 4 304 5 HOH HOH . 
DB 5 HOH D 1 301 33 HOH HOH . 
EB 5 HOH R 1 201 7 HOH HOH . 
FB 5 HOH T 1 201 25 HOH HOH . 
GB 5 HOH H 1 201 22 HOH HOH . 
GB 5 HOH H 2 202 21 HOH HOH . 
HB 5 HOH V 1 201 28 HOH HOH . 
IB 5 HOH E 1 201 34 HOH HOH . 
JB 5 HOH F 1 301 2 HOH HOH . 
JB 5 HOH F 2 302 17 HOH HOH . 
JB 5 HOH F 3 303 16 HOH HOH . 
JB 5 HOH F 4 304 36 HOH HOH . 
JB 5 HOH F 5 305 35 HOH HOH . 
KB 5 HOH I 1 301 8 HOH HOH . 
LB 5 HOH J 1 301 37 HOH HOH . 
LB 5 HOH J 2 302 12 HOH HOH . 
MB 5 HOH L 1 201 4 HOH HOH . 
NB 5 HOH M 1 301 10 HOH HOH . 
NB 5 HOH M 2 302 15 HOH HOH . 
NB 5 HOH M 3 303 41 HOH HOH . 
OB 5 HOH N 1 301 13 HOH HOH . 
OB 5 HOH N 2 302 24 HOH HOH . 
OB 5 HOH N 3 303 26 HOH HOH . 
PB 5 HOH X 1 201 38 HOH HOH . 
QB 5 HOH a 1 201 1 HOH HOH . 
RB 5 HOH d 1 201 40 HOH HOH . 
SB 5 HOH e 1 201 14 HOH HOH . 
TB 5 HOH i 1 201 18 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         LA 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -15.062 
_atom_site.Cartn_y               -31.179 
_atom_site.Cartn_z               10.855 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        80.25 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#