data_8SQ0
#
_model_server_result.job_id            GpxMOX3MkFojx9wF1TnZFw 
_model_server_result.datetime_utc      '2024-10-11 03:15:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8sq0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1603}' 
#
_entry.id    8SQ0 
#
_exptl.entry_id    8SQ0 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              648.891 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8SQ0 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SQ0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 J N N 
#
_chem_comp.formula           'C35 H69 O8 P' 
_chem_comp.formula_weight    648.891 
_chem_comp.id                LPP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE;L-B,G-DIPALMITOYL-A-PHOSPHATIDIC ACID DISODIUM SALT;3-SN-PHOSPHATIDIC ACID;1,2-DIPALMITOYLDISODIUM SALT' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O2 LPP sing 305 n n 
P1 O3 LPP doub 306 n n 
P1 O4 LPP sing 307 n n 
P1 O5 LPP sing 308 n n 
O2 HO2 LPP sing 309 n n 
O4 HO4 LPP sing 310 n n 
O5 C6 LPP sing 311 n n 
C6 C7 LPP sing 312 n n 
C6 HC61 LPP sing 313 n n 
C6 HC62 LPP sing 314 n n 
C7 C8 LPP sing 315 n n 
C7 O9 LPP sing 316 n n 
C7 HC7 LPP sing 317 n n 
C8 O27 LPP sing 318 n n 
C8 HC81 LPP sing 319 n n 
C8 HC82 LPP sing 320 n n 
O9 C11 LPP sing 321 n n 
O27 C29 LPP sing 322 n n 
C11 O10 LPP doub 323 n n 
C11 C12 LPP sing 324 n n 
C12 C13 LPP sing 325 n n 
C12 H121 LPP sing 326 n n 
C12 H122 LPP sing 327 n n 
C13 C14 LPP sing 328 n n 
C13 H131 LPP sing 329 n n 
C13 H132 LPP sing 330 n n 
C14 C15 LPP sing 331 n n 
C14 H141 LPP sing 332 n n 
C14 H142 LPP sing 333 n n 
C15 C16 LPP sing 334 n n 
C15 H151 LPP sing 335 n n 
C15 H152 LPP sing 336 n n 
C16 C17 LPP sing 337 n n 
C16 H161 LPP sing 338 n n 
C16 H162 LPP sing 339 n n 
C17 C18 LPP sing 340 n n 
C17 H171 LPP sing 341 n n 
C17 H172 LPP sing 342 n n 
C18 C19 LPP sing 343 n n 
C18 H181 LPP sing 344 n n 
C18 H182 LPP sing 345 n n 
C19 C20 LPP sing 346 n n 
C19 H191 LPP sing 347 n n 
C19 H192 LPP sing 348 n n 
C20 C21 LPP sing 349 n n 
C20 H201 LPP sing 350 n n 
C20 H202 LPP sing 351 n n 
C21 C22 LPP sing 352 n n 
C21 H211 LPP sing 353 n n 
C21 H212 LPP sing 354 n n 
C22 C23 LPP sing 355 n n 
C22 H221 LPP sing 356 n n 
C22 H222 LPP sing 357 n n 
C23 C24 LPP sing 358 n n 
C23 H231 LPP sing 359 n n 
C23 H232 LPP sing 360 n n 
C24 C25 LPP sing 361 n n 
C24 H241 LPP sing 362 n n 
C24 H242 LPP sing 363 n n 
C25 C26 LPP sing 364 n n 
C25 H251 LPP sing 365 n n 
C25 H252 LPP sing 366 n n 
C26 H261 LPP sing 367 n n 
C26 H262 LPP sing 368 n n 
C26 H263 LPP sing 369 n n 
C29 O28 LPP doub 370 n n 
C29 C30 LPP sing 371 n n 
C30 C31 LPP sing 372 n n 
C30 H301 LPP sing 373 n n 
C30 H302 LPP sing 374 n n 
C31 C32 LPP sing 375 n n 
C31 H311 LPP sing 376 n n 
C31 H312 LPP sing 377 n n 
C32 C33 LPP sing 378 n n 
C32 H321 LPP sing 379 n n 
C32 H322 LPP sing 380 n n 
C33 C34 LPP sing 381 n n 
C33 H331 LPP sing 382 n n 
C33 H332 LPP sing 383 n n 
C34 C35 LPP sing 384 n n 
C34 H341 LPP sing 385 n n 
C34 H342 LPP sing 386 n n 
C35 C36 LPP sing 387 n n 
C35 H351 LPP sing 388 n n 
C35 H352 LPP sing 389 n n 
C36 C37 LPP sing 390 n n 
C36 H361 LPP sing 391 n n 
C36 H362 LPP sing 392 n n 
C37 C38 LPP sing 393 n n 
C37 H371 LPP sing 394 n n 
C37 H372 LPP sing 395 n n 
C38 C39 LPP sing 396 n n 
C38 H381 LPP sing 397 n n 
C38 H382 LPP sing 398 n n 
C39 C40 LPP sing 399 n n 
C39 H391 LPP sing 400 n n 
C39 H392 LPP sing 401 n n 
C40 C41 LPP sing 402 n n 
C40 H401 LPP sing 403 n n 
C40 H402 LPP sing 404 n n 
C41 C42 LPP sing 405 n n 
C41 H411 LPP sing 406 n n 
C41 H412 LPP sing 407 n n 
C42 C43 LPP sing 408 n n 
C42 H421 LPP sing 409 n n 
C42 H422 LPP sing 410 n n 
C43 C44 LPP sing 411 n n 
C43 H431 LPP sing 412 n n 
C43 H432 LPP sing 413 n n 
C44 H441 LPP sing 414 n n 
C44 H442 LPP sing 415 n n 
C44 H443 LPP sing 416 n n 
#
_atom_sites.entry_id                     8SQ0 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 PTY A 1 1601 1601 PTY PTY . 
F 4 GP7 A 1 1602 1602 GP7 GP7 . 
G 5 LPP A 1 1603 1603 LPP LPP . 
H 3 PTY B 1 1601 1601 PTY PTY . 
I 4 GP7 B 1 1602 1602 GP7 GP7 . 
J 5 LPP B 1 1603 1603 LPP LPP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 LPP . . . J 5 188.914 175.454 177.509 1 52.82 ? P1 LPP 1603 B 1 
HETATM 2 O O2 LPP . . . J 5 189.736 175.55 178.775 1 52.82 ? O2 LPP 1603 B 1 
HETATM 3 O O3 LPP . . . J 5 188.016 176.659 177.397 1 52.82 ? O3 LPP 1603 B 1 
HETATM 4 O O4 LPP . . . J 5 189.823 175.412 176.312 1 52.82 ? O4 LPP 1603 B 1 
HETATM 5 O O5 LPP . . . J 5 187.969 174.072 177.562 1 52.82 ? O5 LPP 1603 B 1 
HETATM 6 C C6 LPP . . . J 5 186.572 174.207 177.789 1 52.82 ? C6 LPP 1603 B 1 
HETATM 7 C C7 LPP . . . J 5 186.284 173.945 179.284 1 52.82 ? C7 LPP 1603 B 1 
HETATM 8 C C8 LPP . . . J 5 186.374 175.27 180.038 1 52.82 ? C8 LPP 1603 B 1 
HETATM 9 O O9 LPP . . . J 5 185.007 173.409 179.492 1 52.82 ? O9 LPP 1603 B 1 
HETATM 10 O O27 LPP . . . J 5 187.608 175.362 180.712 1 52.82 ? O27 LPP 1603 B 1 
HETATM 11 C C11 LPP . . . J 5 184.646 172.219 178.824 1 52.82 ? C11 LPP 1603 B 1 
HETATM 12 O O10 LPP . . . J 5 184.402 172.228 177.662 1 52.82 ? O10 LPP 1603 B 1 
HETATM 13 C C12 LPP . . . J 5 184.513 170.886 179.595 1 52.82 ? C12 LPP 1603 B 1 
HETATM 14 C C13 LPP . . . J 5 184.554 171.093 181.117 1 52.82 ? C13 LPP 1603 B 1 
HETATM 15 C C14 LPP . . . J 5 185.555 170.089 181.727 1 52.82 ? C14 LPP 1603 B 1 
HETATM 16 C C15 LPP . . . J 5 184.865 168.725 181.942 1 52.82 ? C15 LPP 1603 B 1 
HETATM 17 C C16 LPP . . . J 5 184.941 168.366 183.441 1 52.82 ? C16 LPP 1603 B 1 
HETATM 18 C C17 LPP . . . J 5 183.589 168.674 184.114 1 52.82 ? C17 LPP 1603 B 1 
HETATM 19 C C18 LPP . . . J 5 183.812 169.151 185.567 1 52.82 ? C18 LPP 1603 B 1 
HETATM 20 C C19 LPP . . . J 5 182.444 169.464 186.22 1 52.82 ? C19 LPP 1603 B 1 
HETATM 21 C C20 LPP . . . J 5 182.645 170.443 187.402 1 52.82 ? C20 LPP 1603 B 1 
HETATM 22 C C21 LPP . . . J 5 181.597 170.167 188.504 1 52.82 ? C21 LPP 1603 B 1 
HETATM 23 C C22 LPP . . . J 5 180.693 171.404 188.7 1 52.82 ? C22 LPP 1603 B 1 
HETATM 24 C C23 LPP . . . J 5 180.247 171.516 190.161 1 52.82 ? C23 LPP 1603 B 1 
HETATM 25 C C24 LPP . . . J 5 180.268 173 190.58 1 52.82 ? C24 LPP 1603 B 1 
HETATM 26 C C25 LPP . . . J 5 179.575 173.191 191.921 1 52.82 ? C25 LPP 1603 B 1 
HETATM 27 C C26 LPP . . . J 5 180.366 172.482 193.035 1 52.82 ? C26 LPP 1603 B 1 
HETATM 28 C C29 LPP . . . J 5 187.503 174.961 182.054 1 52.82 ? C29 LPP 1603 B 1 
HETATM 29 O O28 LPP . . . J 5 186.488 174.498 182.434 1 52.82 ? O28 LPP 1603 B 1 
HETATM 30 C C30 LPP . . . J 5 188.679 175.128 183.026 1 52.82 ? C30 LPP 1603 B 1 
HETATM 31 C C31 LPP . . . J 5 188.45 174.226 184.236 1 52.82 ? C31 LPP 1603 B 1 
HETATM 32 C C32 LPP . . . J 5 189.421 174.657 185.328 1 52.82 ? C32 LPP 1603 B 1 
HETATM 33 C C33 LPP . . . J 5 188.771 174.489 186.709 1 52.82 ? C33 LPP 1603 B 1 
HETATM 34 C C34 LPP . . . J 5 188.778 175.819 187.445 1 52.82 ? C34 LPP 1603 B 1 
HETATM 35 C C35 LPP . . . J 5 189.779 175.744 188.616 1 52.82 ? C35 LPP 1603 B 1 
HETATM 36 C C36 LPP . . . J 5 189.085 176.173 189.92 1 52.82 ? C36 LPP 1603 B 1 
HETATM 37 C C37 LPP . . . J 5 189.797 175.505 191.118 1 52.82 ? C37 LPP 1603 B 1 
HETATM 38 C C38 LPP . . . J 5 188.757 175.205 192.21 1 52.82 ? C38 LPP 1603 B 1 
HETATM 39 C C39 LPP . . . J 5 189.16 175.905 193.509 1 52.82 ? C39 LPP 1603 B 1 
HETATM 40 C C40 LPP . . . J 5 187.989 176.733 194.06 1 52.82 ? C40 LPP 1603 B 1 
HETATM 41 C C41 LPP . . . J 5 188.435 177.541 195.291 1 52.82 ? C41 LPP 1603 B 1 
HETATM 42 C C42 LPP . . . J 5 189.662 176.899 195.976 1 52.82 ? C42 LPP 1603 B 1 
HETATM 43 C C43 LPP . . . J 5 189.32 176.443 197.397 1 52.82 ? C43 LPP 1603 B 1 
HETATM 44 C C44 LPP . . . J 5 190.492 175.654 197.963 1 52.82 ? C44 LPP 1603 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           44 
#