data_8SQM
#
_model_server_result.job_id            3n3XXp-0CBqMvfvvhMgs-Q 
_model_server_result.datetime_utc      '2024-10-10 23:33:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8sqm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1601}' 
#
_entry.id    8SQM 
#
_exptl.entry_id    8SQM 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              691.959 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C37 H74 N O8 P' 
_chem_comp.formula_weight    691.959 
_chem_comp.id                8PE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3-SN-PHOSPHATIDYLETHANOLAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O12 P 8PE doub 1 n n 
O11 P 8PE sing 2 n n 
P O14 8PE sing 3 n n 
P O13 8PE sing 4 n n 
C12 N 8PE sing 5 n n 
N HN 8PE sing 6 n n 
N HNA 8PE sing 7 n n 
O11 C1 8PE sing 8 n n 
O13 C11 8PE sing 9 n n 
O14 HO14 8PE sing 10 n n 
C12 C11 8PE sing 11 n n 
C11 H11 8PE sing 12 n n 
C11 H11A 8PE sing 13 n n 
C12 H12 8PE sing 14 n n 
C12 H12A 8PE sing 15 n n 
C2 C1 8PE sing 16 n n 
C1 H1 8PE sing 17 n n 
C1 H1A 8PE sing 18 n n 
C3 C2 8PE sing 19 n n 
C2 O21 8PE sing 20 n n 
C2 H2 8PE sing 21 n n 
O31 C3 8PE sing 22 n n 
C3 H3 8PE sing 23 n n 
C3 H3A 8PE sing 24 n n 
C31 O31 8PE sing 25 n n 
O32 C31 8PE doub 26 n n 
C32 C31 8PE sing 27 n n 
C32 C33 8PE sing 28 n n 
C32 H32 8PE sing 29 n n 
C32 H32A 8PE sing 30 n n 
C33 C34 8PE sing 31 n n 
C33 H33 8PE sing 32 n n 
C33 H33A 8PE sing 33 n n 
C35 C34 8PE sing 34 n n 
C34 H34 8PE sing 35 n n 
C34 H34A 8PE sing 36 n n 
C35 C36 8PE sing 37 n n 
C35 H35 8PE sing 38 n n 
C35 H35A 8PE sing 39 n n 
C37 C36 8PE sing 40 n n 
C36 H36 8PE sing 41 n n 
C36 H36A 8PE sing 42 n n 
C38 C37 8PE sing 43 n n 
C37 H37 8PE sing 44 n n 
C37 H37A 8PE sing 45 n n 
C39 C38 8PE sing 46 n n 
C38 H38 8PE sing 47 n n 
C38 H38A 8PE sing 48 n n 
C39 C3A 8PE sing 49 n n 
C39 H39 8PE sing 50 n n 
C39 H39A 8PE sing 51 n n 
C3B C3A 8PE sing 52 n n 
C3A H3AA 8PE sing 53 n n 
C3A H3AB 8PE sing 54 n n 
C3C C3B 8PE sing 55 n n 
C3B H3B 8PE sing 56 n n 
C3B H3BA 8PE sing 57 n n 
C3C C3D 8PE sing 58 n n 
C3C H3C 8PE sing 59 n n 
C3C H3CA 8PE sing 60 n n 
C3E C3D 8PE sing 61 n n 
C3D H3D 8PE sing 62 n n 
C3D H3DA 8PE sing 63 n n 
C3F C3E 8PE sing 64 n n 
C3E H3E 8PE sing 65 n n 
C3E H3EA 8PE sing 66 n n 
C3G C3F 8PE sing 67 n n 
C3F H3F 8PE sing 68 n n 
C3F H3FA 8PE sing 69 n n 
C3G C3H 8PE sing 70 n n 
C3G H3G 8PE sing 71 n n 
C3G H3GA 8PE sing 72 n n 
C3I C3H 8PE sing 73 n n 
C3H H3H 8PE sing 74 n n 
C3H H3HA 8PE sing 75 n n 
C3I H3I 8PE sing 76 n n 
C3I H3IA 8PE sing 77 n n 
C3I H3IB 8PE sing 78 n n 
O21 C21 8PE sing 79 n n 
C21 O22 8PE doub 80 n n 
C21 C22 8PE sing 81 n n 
C23 C22 8PE sing 82 n n 
C22 H22 8PE sing 83 n n 
C22 H22A 8PE sing 84 n n 
C23 C24 8PE sing 85 n n 
C23 H23 8PE sing 86 n n 
C23 H23A 8PE sing 87 n n 
C25 C24 8PE sing 88 n n 
C24 H24 8PE sing 89 n n 
C24 H24A 8PE sing 90 n n 
C25 C26 8PE sing 91 n n 
C25 H25 8PE sing 92 n n 
C25 H25A 8PE sing 93 n n 
C27 C26 8PE sing 94 n n 
C26 H26 8PE sing 95 n n 
C26 H26A 8PE sing 96 n n 
C27 C28 8PE sing 97 n n 
C27 H27 8PE sing 98 n n 
C27 H27A 8PE sing 99 n n 
C29 C28 8PE sing 100 n n 
C28 H28 8PE sing 101 n n 
C28 H28A 8PE sing 102 n n 
C29 C2A 8PE sing 103 n n 
C29 H29 8PE sing 104 n n 
C29 H29A 8PE sing 105 n n 
C2B C2A 8PE sing 106 n n 
C2A H2A 8PE sing 107 n n 
C2A H2AA 8PE sing 108 n n 
C2C C2B 8PE sing 109 n n 
C2B H2B 8PE sing 110 n n 
C2B H2BA 8PE sing 111 n n 
C2C C2D 8PE sing 112 n n 
C2C H2C 8PE sing 113 n n 
C2C H2CA 8PE sing 114 n n 
C2E C2D 8PE sing 115 n n 
C2D H2D 8PE sing 116 n n 
C2D H2DA 8PE sing 117 n n 
C2E H2E 8PE sing 118 n n 
C2E H2EA 8PE sing 119 n n 
C2E H2EB 8PE sing 120 n n 
#
_atom_sites.entry_id                     8SQM 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          C 
_pdbx_nonpoly_scheme.entity_id        3 
_pdbx_nonpoly_scheme.mon_id           8PE 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      1601 
_pdbx_nonpoly_scheme.auth_seq_num     1601 
_pdbx_nonpoly_scheme.pdb_mon_id       8PE 
_pdbx_nonpoly_scheme.auth_mon_id      8PE 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P 8PE . . . C 3 189.61 191.584 222.789 1 49.58 ? P 8PE 1601 A 1 
HETATM 2 N N 8PE . . . C 3 187.809 192.06 227.341 1 49.58 ? N 8PE 1601 A 1 
HETATM 3 O O11 8PE . . . C 3 189.538 190.196 221.92 1 49.58 ? O11 8PE 1601 A 1 
HETATM 4 O O12 8PE . . . C 3 188.365 192.399 222.557 1 49.58 ? O12 8PE 1601 A 1 
HETATM 5 O O13 8PE . . . C 3 189.765 191.256 224.39 1 49.58 ? O13 8PE 1601 A 1 
HETATM 6 O O14 8PE . . . C 3 190.807 192.37 222.324 1 49.58 ? O14 8PE 1601 A 1 
HETATM 7 C C11 8PE . . . C 3 189.108 192.098 225.287 1 49.58 ? C11 8PE 1601 A 1 
HETATM 8 C C12 8PE . . . C 3 188.801 191.335 226.57 1 49.58 ? C12 8PE 1601 A 1 
HETATM 9 C C1 8PE . . . C 3 190.588 189.951 221.039 1 49.58 ? C1 8PE 1601 A 1 
HETATM 10 C C2 8PE . . . C 3 190.026 189.458 219.715 1 49.58 ? C2 8PE 1601 A 1 
HETATM 11 C C3 8PE . . . C 3 190.516 190.369 218.594 1 49.58 ? C3 8PE 1601 A 1 
HETATM 12 O O31 8PE . . . C 3 190.099 189.834 217.373 1 49.58 ? O31 8PE 1601 A 1 
HETATM 13 O O32 8PE . . . C 3 192.194 189.139 217.053 1 49.58 ? O32 8PE 1601 A 1 
HETATM 14 C C31 8PE . . . C 3 191.048 188.976 216.812 1 49.58 ? C31 8PE 1601 A 1 
HETATM 15 C C32 8PE . . . C 3 190.609 187.831 215.902 1 49.58 ? C32 8PE 1601 A 1 
HETATM 16 C C33 8PE . . . C 3 191.575 187.749 214.724 1 49.58 ? C33 8PE 1601 A 1 
HETATM 17 C C34 8PE . . . C 3 190.905 187.004 213.573 1 49.58 ? C34 8PE 1601 A 1 
HETATM 18 C C35 8PE . . . C 3 191.605 187.345 212.26 1 49.58 ? C35 8PE 1601 A 1 
HETATM 19 C C36 8PE . . . C 3 190.684 186.981 211.095 1 49.58 ? C36 8PE 1601 A 1 
HETATM 20 C C37 8PE . . . C 3 191.453 186.179 210.047 1 49.58 ? C37 8PE 1601 A 1 
HETATM 21 C C38 8PE . . . C 3 190.477 185.654 208.997 1 49.58 ? C38 8PE 1601 A 1 
HETATM 22 O O21 8PE . . . C 3 190.49 188.166 219.484 1 49.58 ? O21 8PE 1601 A 1 
HETATM 23 O O22 8PE . . . C 3 188.959 187.482 220.96 1 49.58 ? O22 8PE 1601 A 1 
HETATM 24 C C21 8PE . . . C 3 189.893 187.196 220.292 1 49.58 ? C21 8PE 1601 A 1 
HETATM 25 C C22 8PE . . . C 3 190.454 185.775 220.312 1 49.58 ? C22 8PE 1601 A 1 
HETATM 26 C C23 8PE . . . C 3 189.592 184.861 219.444 1 49.58 ? C23 8PE 1601 A 1 
HETATM 27 C C24 8PE . . . C 3 190.495 184.142 218.45 1 49.58 ? C24 8PE 1601 A 1 
HETATM 28 C C25 8PE . . . C 3 189.66 183.42 217.395 1 49.58 ? C25 8PE 1601 A 1 
HETATM 29 C C26 8PE . . . C 3 188.839 184.427 216.596 1 49.58 ? C26 8PE 1601 A 1 
HETATM 30 C C27 8PE . . . C 3 189.036 184.182 215.103 1 49.58 ? C27 8PE 1601 A 1 
HETATM 31 C C28 8PE . . . C 3 187.743 183.659 214.489 1 49.58 ? C28 8PE 1601 A 1 
HETATM 32 C C29 8PE . . . C 3 187.967 183.361 213.011 1 49.58 ? C29 8PE 1601 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           32 
#