data_8SRA
#
_model_server_result.job_id            g9SJGpuFxYNSvxlXSt2cFA 
_model_server_result.datetime_utc      '2024-10-11 05:24:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8sra 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":3005}' 
#
_entry.id    8SRA 
#
_exptl.entry_id    8SRA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              386.654 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            CHOLESTEROL 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8SRA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SRA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 997 A CYS 997 1_555 A SG CYS 1006 A CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 B SG CYS 997 B CYS 997 1_555 B SG CYS 1006 B CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 C SG CYS 997 C CYS 997 1_555 C SG CYS 1006 C CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 D SG CYS 997 D CYS 997 1_555 D SG CYS 1006 D CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc1 A O LEU 621 A LEU 621 1_555 F CA CA . A CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc2 A O GLY 623 A GLY 623 1_555 F CA CA . A CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
metalc ? metalc3 A OE1 GLU 850 A GLU 850 1_555 E CA CA . A CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
metalc ? metalc4 A OE2 GLU 850 A GLU 850 1_555 E CA CA . A CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? 
metalc ? metalc5 A OE1 GLN 853 A GLN 853 1_555 E CA CA . A CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc6 A OD1 ASN 869 A ASN 869 1_555 E CA CA . A CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? 
metalc ? metalc7 A OD2 ASP 872 A ASP 872 1_555 E CA CA . A CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? 
metalc ? metalc8 A OE1 GLU 1114 A GLU 1114 1_555 F CA CA . A CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? 
metalc ? metalc9 A OE2 GLU 1114 A GLU 1114 1_555 F CA CA . A CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? 
metalc ? metalc10 B O LEU 621 B LEU 621 1_555 K CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc11 B O GLY 623 B GLY 623 1_555 K CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc12 B OE1 GLU 850 B GLU 850 1_555 J CA CA . B CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
metalc ? metalc13 B OE2 GLU 850 B GLU 850 1_555 J CA CA . B CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? 
metalc ? metalc14 B OE1 GLN 853 B GLN 853 1_555 J CA CA . B CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc15 B OD1 ASN 869 B ASN 869 1_555 J CA CA . B CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? 
metalc ? metalc16 B OD2 ASP 872 B ASP 872 1_555 J CA CA . B CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? 
metalc ? metalc17 B OE1 GLU 1114 B GLU 1114 1_555 K CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? 
metalc ? metalc18 B OE2 GLU 1114 B GLU 1114 1_555 K CA CA . B CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? 
metalc ? metalc19 C O LEU 621 C LEU 621 1_555 P CA CA . C CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc20 C O GLY 623 C GLY 623 1_555 P CA CA . C CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc21 C OE1 GLU 850 C GLU 850 1_555 O CA CA . C CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
metalc ? metalc22 C OE2 GLU 850 C GLU 850 1_555 O CA CA . C CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? 
metalc ? metalc23 C OE1 GLN 853 C GLN 853 1_555 O CA CA . C CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc24 C OD1 ASN 869 C ASN 869 1_555 O CA CA . C CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? 
metalc ? metalc25 C OD2 ASP 872 C ASP 872 1_555 O CA CA . C CA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? 
metalc ? metalc26 C OE1 GLU 1114 C GLU 1114 1_555 P CA CA . C CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc27 C OE2 GLU 1114 C GLU 1114 1_555 P CA CA . C CA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? 
metalc ? metalc28 D O LEU 621 D LEU 621 1_555 W CA CA . D CA 6004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc29 D O GLY 623 D GLY 623 1_555 W CA CA . D CA 6004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
metalc ? metalc30 D OE1 GLU 850 D GLU 850 1_555 V CA CA . D CA 6003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
metalc ? metalc31 D OE2 GLU 850 D GLU 850 1_555 V CA CA . D CA 6003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? 
metalc ? metalc32 D OE1 GLN 853 D GLN 853 1_555 V CA CA . D CA 6003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc33 D OD1 ASN 869 D ASN 869 1_555 V CA CA . D CA 6003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc34 D OD2 ASP 872 D ASP 872 1_555 V CA CA . D CA 6003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? 
metalc ? metalc35 D OE1 GLU 1114 D GLU 1114 1_555 W CA CA . D CA 6004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? 
metalc ? metalc36 D OE2 GLU 1114 D GLU 1114 1_555 W CA CA . D CA 6004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? 
#
_chem_comp.formula           'C27 H46 O' 
_chem_comp.formula_weight    386.654 
_chem_comp.id                CLR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              CHOLESTEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 CLR sing 70 n n 
C1 C10 CLR sing 71 n n 
C1 H11 CLR sing 72 n n 
C1 H12 CLR sing 73 n n 
C2 C3 CLR sing 74 n n 
C2 H21 CLR sing 75 n n 
C2 H22 CLR sing 76 n n 
C3 C4 CLR sing 77 n n 
C3 O1 CLR sing 78 n n 
C3 H3 CLR sing 79 n n 
C4 C5 CLR sing 80 n n 
C4 H41 CLR sing 81 n n 
C4 H42 CLR sing 82 n n 
C5 C6 CLR doub 83 n n 
C5 C10 CLR sing 84 n n 
C6 C7 CLR sing 85 n n 
C6 H6 CLR sing 86 n n 
C7 C8 CLR sing 87 n n 
C7 H71 CLR sing 88 n n 
C7 H72 CLR sing 89 n n 
C8 C9 CLR sing 90 n n 
C8 C14 CLR sing 91 n n 
C8 H8 CLR sing 92 n n 
C9 C10 CLR sing 93 n n 
C9 C11 CLR sing 94 n n 
C9 H9 CLR sing 95 n n 
C10 C19 CLR sing 96 n n 
C11 C12 CLR sing 97 n n 
C11 H111 CLR sing 98 n n 
C11 H112 CLR sing 99 n n 
C12 C13 CLR sing 100 n n 
C12 H121 CLR sing 101 n n 
C12 H122 CLR sing 102 n n 
C13 C14 CLR sing 103 n n 
C13 C17 CLR sing 104 n n 
C13 C18 CLR sing 105 n n 
C14 C15 CLR sing 106 n n 
C14 H14 CLR sing 107 n n 
C15 C16 CLR sing 108 n n 
C15 H151 CLR sing 109 n n 
C15 H152 CLR sing 110 n n 
C16 C17 CLR sing 111 n n 
C16 H161 CLR sing 112 n n 
C16 H162 CLR sing 113 n n 
C17 C20 CLR sing 114 n n 
C17 H17 CLR sing 115 n n 
C18 H181 CLR sing 116 n n 
C18 H182 CLR sing 117 n n 
C18 H183 CLR sing 118 n n 
C19 H191 CLR sing 119 n n 
C19 H192 CLR sing 120 n n 
C19 H193 CLR sing 121 n n 
C20 C21 CLR sing 122 n n 
C20 C22 CLR sing 123 n n 
C20 H20 CLR sing 124 n n 
C21 H211 CLR sing 125 n n 
C21 H212 CLR sing 126 n n 
C21 H213 CLR sing 127 n n 
C22 C23 CLR sing 128 n n 
C22 H221 CLR sing 129 n n 
C22 H222 CLR sing 130 n n 
C23 C24 CLR sing 131 n n 
C23 H231 CLR sing 132 n n 
C23 H232 CLR sing 133 n n 
C24 C25 CLR sing 134 n n 
C24 H241 CLR sing 135 n n 
C24 H242 CLR sing 136 n n 
C25 C26 CLR sing 137 n n 
C25 C27 CLR sing 138 n n 
C25 H25 CLR sing 139 n n 
C26 H261 CLR sing 140 n n 
C26 H262 CLR sing 141 n n 
C26 H263 CLR sing 142 n n 
C27 H271 CLR sing 143 n n 
C27 H272 CLR sing 144 n n 
C27 H273 CLR sing 145 n n 
O1 H1 CLR sing 146 n n 
#
_atom_sites.entry_id                     8SRA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CA A 1 3001 3001 CA CA . 
F 2 CA A 1 3002 3002 CA CA . 
G 3 CLR A 1 3003 6003 CLR CLR . 
H 3 CLR A 1 3004 6001 CLR CLR . 
I 3 CLR A 1 3005 6002 CLR CLR . 
J 2 CA B 1 3001 3001 CA CA . 
K 2 CA B 1 3002 3002 CA CA . 
L 3 CLR B 1 3003 6003 CLR CLR . 
M 3 CLR B 1 3004 6001 CLR CLR . 
N 3 CLR B 1 3005 6002 CLR CLR . 
O 2 CA C 1 3001 3001 CA CA . 
P 2 CA C 1 3002 3002 CA CA . 
Q 3 CLR C 1 3003 6003 CLR CLR . 
R 3 CLR C 1 3004 6001 CLR CLR . 
S 3 CLR C 1 3005 6002 CLR CLR . 
T 3 CLR D 1 6001 6001 CLR CLR . 
U 3 CLR D 1 6002 6002 CLR CLR . 
V 2 CA D 1 6003 3001 CA CA . 
W 2 CA D 1 6004 3002 CA CA . 
X 3 CLR D 1 6005 6003 CLR CLR . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CLR . . . S 3 201.085 202.682 131.735 1 113.3 ? C1 CLR 3005 C 1 
HETATM 2 C C2 CLR . . . S 3 201.384 202.552 130.242 1 114.83 ? C2 CLR 3005 C 1 
HETATM 3 C C3 CLR . . . S 3 201.983 201.207 129.925 1 115.34 ? C3 CLR 3005 C 1 
HETATM 4 C C4 CLR . . . S 3 201.01 200.125 130.349 1 115.14 ? C4 CLR 3005 C 1 
HETATM 5 C C5 CLR . . . S 3 200.683 200.224 131.823 1 115.78 ? C5 CLR 3005 C 1 
HETATM 6 C C6 CLR . . . S 3 200.858 199.193 132.634 1 115.18 ? C6 CLR 3005 C 1 
HETATM 7 C C7 CLR . . . S 3 200.426 199.13 134.065 1 110.22 ? C7 CLR 3005 C 1 
HETATM 8 C C8 CLR . . . S 3 199.691 200.377 134.547 1 110.71 ? C8 CLR 3005 C 1 
HETATM 9 C C9 CLR . . . S 3 200.265 201.625 133.855 1 112 ? C9 CLR 3005 C 1 
HETATM 10 C C10 CLR . . . S 3 200.174 201.573 132.307 1 112.64 ? C10 CLR 3005 C 1 
HETATM 11 C C11 CLR . . . S 3 199.673 202.914 134.44 1 114.89 ? C11 CLR 3005 C 1 
HETATM 12 C C12 CLR . . . S 3 199.864 203.007 135.956 1 115.33 ? C12 CLR 3005 C 1 
HETATM 13 C C13 CLR . . . S 3 199.265 201.799 136.68 1 117.09 ? C13 CLR 3005 C 1 
HETATM 14 C C14 CLR . . . S 3 199.884 200.536 136.049 1 115.11 ? C14 CLR 3005 C 1 
HETATM 15 C C15 CLR . . . S 3 199.447 199.413 136.984 1 112.93 ? C15 CLR 3005 C 1 
HETATM 16 C C16 CLR . . . S 3 199.464 200.07 138.378 1 112.03 ? C16 CLR 3005 C 1 
HETATM 17 C C17 CLR . . . S 3 199.701 201.589 138.157 1 119.01 ? C17 CLR 3005 C 1 
HETATM 18 C C18 CLR . . . S 3 197.732 201.796 136.586 1 114.78 ? C18 CLR 3005 C 1 
HETATM 19 C C19 CLR . . . S 3 198.736 201.756 131.795 1 115.2 ? C19 CLR 3005 C 1 
HETATM 20 C C20 CLR . . . S 3 199.09 202.457 139.273 1 117.68 ? C20 CLR 3005 C 1 
HETATM 21 C C21 CLR . . . S 3 199.581 203.901 139.256 1 115.99 ? C21 CLR 3005 C 1 
HETATM 22 C C22 CLR . . . S 3 199.362 201.831 140.647 1 115.61 ? C22 CLR 3005 C 1 
HETATM 23 C C23 CLR . . . S 3 198.761 202.58 141.809 1 114.29 ? C23 CLR 3005 C 1 
HETATM 24 C C24 CLR . . . S 3 198.857 201.828 143.11 1 113.78 ? C24 CLR 3005 C 1 
HETATM 25 C C25 CLR . . . S 3 198.034 202.4 144.261 1 116.66 ? C25 CLR 3005 C 1 
HETATM 26 C C26 CLR . . . S 3 198.439 203.832 144.568 1 115.06 ? C26 CLR 3005 C 1 
HETATM 27 C C27 CLR . . . S 3 196.545 202.32 143.972 1 114.93 ? C27 CLR 3005 C 1 
HETATM 28 O O1 CLR . . . S 3 202.26 201.118 128.522 1 114.92 ? O1 CLR 3005 C 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    57 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           28 
#