data_8SRH # _model_server_result.job_id 5VV9mAWOf7zSRcmTT8Mwag _model_server_result.datetime_utc '2024-10-18 08:56:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8srh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"HA","auth_seq_id":6003}' # _entry.id 8SRH # _exptl.entry_id 8SRH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SRH _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SRH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 L N N ? 4 M N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 CA N N ? 4 DA N N ? 4 EA N N ? 4 FA N N ? 4 GA N N ? 4 HA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 997 A CYS 997 1_555 A SG CYS 1006 A CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 997 B CYS 997 1_555 B SG CYS 1006 B CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 997 C CYS 997 1_555 C SG CYS 1006 C CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 D SG CYS 997 D CYS 997 1_555 D SG CYS 1006 D CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OE2 GLU 850 A GLU 850 1_555 F MG MG . A MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc2 A OE1 GLN 853 A GLN 853 1_555 F MG MG . A MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc3 G MG MG . A MG 1703 1_555 J O1A APR . A APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc4 G MG MG . A MG 1703 1_555 J O2B APR . A APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc5 H MG MG . A MG 1704 1_555 J O1A APR . A APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc6 I MG MG . A MG 1705 1_555 J O2A APR . A APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc7 B OE2 GLU 850 B GLU 850 1_555 O MG MG . B MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc8 B OE1 GLN 853 B GLN 853 1_555 O MG MG . B MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc9 P MG MG . B MG 1703 1_555 S O1A APR . B APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc10 P MG MG . B MG 1703 1_555 S O2B APR . B APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc11 Q MG MG . B MG 1704 1_555 S O1A APR . B APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc12 R MG MG . B MG 1705 1_555 S O2A APR . B APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc13 C OE2 GLU 850 C GLU 850 1_555 X MG MG . C MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc14 C OE1 GLN 853 C GLN 853 1_555 X MG MG . C MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc15 Y MG MG . C MG 1703 1_555 BA O2B APR . C APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc16 Y MG MG . C MG 1703 1_555 BA O1A APR . C APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc17 Z MG MG . C MG 1704 1_555 BA O1A APR . C APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc18 AA MG MG . C MG 1705 1_555 BA O2A APR . C APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc19 D OE2 GLU 850 D GLU 850 1_555 JA MG MG . D MG 6005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc20 D OE1 GLN 853 D GLN 853 1_555 JA MG MG . D MG 6005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc21 KA MG MG . D MG 6006 1_555 NA O2B APR . D APR 6009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc22 KA MG MG . D MG 6006 1_555 NA O1A APR . D APR 6009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc23 LA MG MG . D MG 6007 1_555 NA O1A APR . D APR 6009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc24 MA MG MG . D MG 6008 1_555 NA O2A APR . D APR 6009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 132 n n C1 C10 CLR sing 133 n n C1 H11 CLR sing 134 n n C1 H12 CLR sing 135 n n C2 C3 CLR sing 136 n n C2 H21 CLR sing 137 n n C2 H22 CLR sing 138 n n C3 C4 CLR sing 139 n n C3 O1 CLR sing 140 n n C3 H3 CLR sing 141 n n C4 C5 CLR sing 142 n n C4 H41 CLR sing 143 n n C4 H42 CLR sing 144 n n C5 C6 CLR doub 145 n n C5 C10 CLR sing 146 n n C6 C7 CLR sing 147 n n C6 H6 CLR sing 148 n n C7 C8 CLR sing 149 n n C7 H71 CLR sing 150 n n C7 H72 CLR sing 151 n n C8 C9 CLR sing 152 n n C8 C14 CLR sing 153 n n C8 H8 CLR sing 154 n n C9 C10 CLR sing 155 n n C9 C11 CLR sing 156 n n C9 H9 CLR sing 157 n n C10 C19 CLR sing 158 n n C11 C12 CLR sing 159 n n C11 H111 CLR sing 160 n n C11 H112 CLR sing 161 n n C12 C13 CLR sing 162 n n C12 H121 CLR sing 163 n n C12 H122 CLR sing 164 n n C13 C14 CLR sing 165 n n C13 C17 CLR sing 166 n n C13 C18 CLR sing 167 n n C14 C15 CLR sing 168 n n C14 H14 CLR sing 169 n n C15 C16 CLR sing 170 n n C15 H151 CLR sing 171 n n C15 H152 CLR sing 172 n n C16 C17 CLR sing 173 n n C16 H161 CLR sing 174 n n C16 H162 CLR sing 175 n n C17 C20 CLR sing 176 n n C17 H17 CLR sing 177 n n C18 H181 CLR sing 178 n n C18 H182 CLR sing 179 n n C18 H183 CLR sing 180 n n C19 H191 CLR sing 181 n n C19 H192 CLR sing 182 n n C19 H193 CLR sing 183 n n C20 C21 CLR sing 184 n n C20 C22 CLR sing 185 n n C20 H20 CLR sing 186 n n C21 H211 CLR sing 187 n n C21 H212 CLR sing 188 n n C21 H213 CLR sing 189 n n C22 C23 CLR sing 190 n n C22 H221 CLR sing 191 n n C22 H222 CLR sing 192 n n C23 C24 CLR sing 193 n n C23 H231 CLR sing 194 n n C23 H232 CLR sing 195 n n C24 C25 CLR sing 196 n n C24 H241 CLR sing 197 n n C24 H242 CLR sing 198 n n C25 C26 CLR sing 199 n n C25 C27 CLR sing 200 n n C25 H25 CLR sing 201 n n C26 H261 CLR sing 202 n n C26 H262 CLR sing 203 n n C26 H263 CLR sing 204 n n C27 H271 CLR sing 205 n n C27 H272 CLR sing 206 n n C27 H273 CLR sing 207 n n O1 H1 CLR sing 208 n n # _atom_sites.entry_id 8SRH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 APR A 1 1701 1701 APR APR . F 3 MG A 1 1702 3001 MG MG . G 3 MG A 1 1703 3101 MG MG . H 3 MG A 1 1704 3102 MG MG . I 3 MG A 1 1705 3103 MG MG . J 2 APR A 1 1706 1702 APR APR . K 4 CLR A 1 1707 6001 CLR CLR . L 4 CLR A 1 1708 6002 CLR CLR . M 4 CLR A 1 1709 6003 CLR CLR . N 2 APR B 1 1701 1701 APR APR . O 3 MG B 1 1702 3001 MG MG . P 3 MG B 1 1703 3101 MG MG . Q 3 MG B 1 1704 3102 MG MG . R 3 MG B 1 1705 3103 MG MG . S 2 APR B 1 1706 1702 APR APR . T 4 CLR B 1 1707 6001 CLR CLR . U 4 CLR B 1 1708 6002 CLR CLR . V 4 CLR B 1 1709 6003 CLR CLR . W 2 APR C 1 1701 1701 APR APR . X 3 MG C 1 1702 3001 MG MG . Y 3 MG C 1 1703 3101 MG MG . Z 3 MG C 1 1704 3102 MG MG . AA 3 MG C 1 1705 3103 MG MG . BA 2 APR C 1 1706 1702 APR APR . CA 4 CLR C 1 1707 6001 CLR CLR . DA 4 CLR C 1 1708 6002 CLR CLR . EA 4 CLR C 1 1709 6003 CLR CLR . FA 4 CLR D 1 6001 6001 CLR CLR . GA 4 CLR D 1 6002 6002 CLR CLR . HA 4 CLR D 1 6003 6003 CLR CLR . IA 2 APR D 1 6004 1701 APR APR . JA 3 MG D 1 6005 3001 MG MG . KA 3 MG D 1 6006 3101 MG MG . LA 3 MG D 1 6007 3102 MG MG . MA 3 MG D 1 6008 3103 MG MG . NA 2 APR D 1 6009 1702 APR APR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . HA 4 150.909 180.801 131.489 1 120.18 ? C1 CLR 6003 D 1 HETATM 2 C C2 CLR . . . HA 4 151.053 181.246 130.032 1 120.18 ? C2 CLR 6003 D 1 HETATM 3 C C3 CLR . . . HA 4 150.275 182.509 129.762 1 120.18 ? C3 CLR 6003 D 1 HETATM 4 C C4 CLR . . . HA 4 150.786 183.602 130.676 1 120.18 ? C4 CLR 6003 D 1 HETATM 5 C C5 CLR . . . HA 4 150.676 183.21 132.133 1 120.18 ? C5 CLR 6003 D 1 HETATM 6 C C6 CLR . . . HA 4 150.056 184.004 132.992 1 120.18 ? C6 CLR 6003 D 1 HETATM 7 C C7 CLR . . . HA 4 149.906 183.744 134.456 1 120.18 ? C7 CLR 6003 D 1 HETATM 8 C C8 CLR . . . HA 4 150.779 182.592 134.941 1 120.18 ? C8 CLR 6003 D 1 HETATM 9 C C9 CLR . . . HA 4 150.745 181.441 133.919 1 120.18 ? C9 CLR 6003 D 1 HETATM 10 C C10 CLR . . . HA 4 151.297 181.874 132.532 1 120.18 ? C10 CLR 6003 D 1 HETATM 11 C C11 CLR . . . HA 4 151.416 180.166 134.458 1 120.18 ? C11 CLR 6003 D 1 HETATM 12 C C12 CLR . . . HA 4 150.933 179.759 135.856 1 120.18 ? C12 CLR 6003 D 1 HETATM 13 C C13 CLR . . . HA 4 151.08 180.906 136.859 1 120.18 ? C13 CLR 6003 D 1 HETATM 14 C C14 CLR . . . HA 4 150.283 182.091 136.287 1 120.18 ? C14 CLR 6003 D 1 HETATM 15 C C15 CLR . . . HA 4 150.184 183.08 137.444 1 120.18 ? C15 CLR 6003 D 1 HETATM 16 C C16 CLR . . . HA 4 150.09 182.183 138.692 1 120.18 ? C16 CLR 6003 D 1 HETATM 17 C C17 CLR . . . HA 4 150.389 180.728 138.241 1 120.18 ? C17 CLR 6003 D 1 HETATM 18 C C18 CLR . . . HA 4 152.56 181.252 137.069 1 120.18 ? C18 CLR 6003 D 1 HETATM 19 C C19 CLR . . . HA 4 152.828 182.036 132.566 1 120.18 ? C19 CLR 6003 D 1 HETATM 20 C C20 CLR . . . HA 4 151.126 179.946 139.339 1 120.18 ? C20 CLR 6003 D 1 HETATM 21 C C21 CLR . . . HA 4 150.475 178.602 139.647 1 120.18 ? C21 CLR 6003 D 1 HETATM 22 C C22 CLR . . . HA 4 151.229 180.798 140.611 1 120.18 ? C22 CLR 6003 D 1 HETATM 23 C C23 CLR . . . HA 4 150.931 180.073 141.896 1 120.18 ? C23 CLR 6003 D 1 HETATM 24 C C24 CLR . . . HA 4 150.15 180.913 142.873 1 120.18 ? C24 CLR 6003 D 1 HETATM 25 C C25 CLR . . . HA 4 150.932 181.401 144.09 1 120.18 ? C25 CLR 6003 D 1 HETATM 26 C C26 CLR . . . HA 4 150.001 181.747 145.241 1 120.18 ? C26 CLR 6003 D 1 HETATM 27 C C27 CLR . . . HA 4 151.965 180.375 144.529 1 120.18 ? C27 CLR 6003 D 1 HETATM 28 O O1 CLR . . . HA 4 150.428 182.904 128.393 1 120.18 ? O1 CLR 6003 D 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 60 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 28 #