data_8SRH # _model_server_result.job_id TvmaobMuFltwtcDc5Hn5Pg _model_server_result.datetime_utc '2024-12-27 15:14:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8srh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"MA","auth_seq_id":6008}' # _entry.id 8SRH # _exptl.entry_id 8SRH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SRH _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SRH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 JA N N ? 3 KA N N ? 3 LA N N ? 3 MA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 997 A CYS 997 1_555 A SG CYS 1006 A CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 997 B CYS 997 1_555 B SG CYS 1006 B CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 997 C CYS 997 1_555 C SG CYS 1006 C CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 D SG CYS 997 D CYS 997 1_555 D SG CYS 1006 D CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OE2 GLU 850 A GLU 850 1_555 F MG MG . A MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc2 A OE1 GLN 853 A GLN 853 1_555 F MG MG . A MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc3 G MG MG . A MG 1703 1_555 J O1A APR . A APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc4 G MG MG . A MG 1703 1_555 J O2B APR . A APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc5 H MG MG . A MG 1704 1_555 J O1A APR . A APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc6 I MG MG . A MG 1705 1_555 J O2A APR . A APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc7 B OE2 GLU 850 B GLU 850 1_555 O MG MG . B MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc8 B OE1 GLN 853 B GLN 853 1_555 O MG MG . B MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc9 P MG MG . B MG 1703 1_555 S O1A APR . B APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc10 P MG MG . B MG 1703 1_555 S O2B APR . B APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc11 Q MG MG . B MG 1704 1_555 S O1A APR . B APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc12 R MG MG . B MG 1705 1_555 S O2A APR . B APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc13 C OE2 GLU 850 C GLU 850 1_555 X MG MG . C MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc14 C OE1 GLN 853 C GLN 853 1_555 X MG MG . C MG 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc15 Y MG MG . C MG 1703 1_555 BA O2B APR . C APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc16 Y MG MG . C MG 1703 1_555 BA O1A APR . C APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc17 Z MG MG . C MG 1704 1_555 BA O1A APR . C APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc18 AA MG MG . C MG 1705 1_555 BA O2A APR . C APR 1706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc19 D OE2 GLU 850 D GLU 850 1_555 JA MG MG . D MG 6005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc20 D OE1 GLN 853 D GLN 853 1_555 JA MG MG . D MG 6005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc21 KA MG MG . D MG 6006 1_555 NA O2B APR . D APR 6009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc22 KA MG MG . D MG 6006 1_555 NA O1A APR . D APR 6009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc23 LA MG MG . D MG 6007 1_555 NA O1A APR . D APR 6009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc24 MA MG MG . D MG 6008 1_555 NA O2A APR . D APR 6009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8SRH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 APR A 1 1701 1701 APR APR . F 3 MG A 1 1702 3001 MG MG . G 3 MG A 1 1703 3101 MG MG . H 3 MG A 1 1704 3102 MG MG . I 3 MG A 1 1705 3103 MG MG . J 2 APR A 1 1706 1702 APR APR . K 4 CLR A 1 1707 6001 CLR CLR . L 4 CLR A 1 1708 6002 CLR CLR . M 4 CLR A 1 1709 6003 CLR CLR . N 2 APR B 1 1701 1701 APR APR . O 3 MG B 1 1702 3001 MG MG . P 3 MG B 1 1703 3101 MG MG . Q 3 MG B 1 1704 3102 MG MG . R 3 MG B 1 1705 3103 MG MG . S 2 APR B 1 1706 1702 APR APR . T 4 CLR B 1 1707 6001 CLR CLR . U 4 CLR B 1 1708 6002 CLR CLR . V 4 CLR B 1 1709 6003 CLR CLR . W 2 APR C 1 1701 1701 APR APR . X 3 MG C 1 1702 3001 MG MG . Y 3 MG C 1 1703 3101 MG MG . Z 3 MG C 1 1704 3102 MG MG . AA 3 MG C 1 1705 3103 MG MG . BA 2 APR C 1 1706 1702 APR APR . CA 4 CLR C 1 1707 6001 CLR CLR . DA 4 CLR C 1 1708 6002 CLR CLR . EA 4 CLR C 1 1709 6003 CLR CLR . FA 4 CLR D 1 6001 6001 CLR CLR . GA 4 CLR D 1 6002 6002 CLR CLR . HA 4 CLR D 1 6003 6003 CLR CLR . IA 2 APR D 1 6004 1701 APR APR . JA 3 MG D 1 6005 3001 MG MG . KA 3 MG D 1 6006 3101 MG MG . LA 3 MG D 1 6007 3102 MG MG . MA 3 MG D 1 6008 3103 MG MG . NA 2 APR D 1 6009 1702 APR APR . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id MA _atom_site.label_entity_id 3 _atom_site.Cartn_x 166.553 _atom_site.Cartn_y 139.511 _atom_site.Cartn_z 259.728 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 157.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 6008 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 54 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #