data_8SRK # _model_server_result.job_id cHStsw1OoOJXu5jOzL1skQ _model_server_result.datetime_utc '2024-12-26 19:43:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8srk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1705}' # _entry.id 8SRK # _exptl.entry_id 8SRK _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SRK _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SRK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N ? 4 J N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 997 A CYS 997 1_555 A SG CYS 1006 A CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 B SG CYS 997 B CYS 997 1_555 B SG CYS 1006 B CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 C SG CYS 997 C CYS 997 1_555 C SG CYS 1006 C CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 D SG CYS 997 D CYS 997 1_555 D SG CYS 1006 D CYS 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A O LEU 621 A LEU 621 1_555 G CA CA . A CA 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc2 A O GLY 623 A GLY 623 1_555 G CA CA . A CA 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc3 A OD1 ASN 869 A ASN 869 1_555 F CA CA . A CA 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc4 B O LEU 621 B LEU 621 1_555 M CA CA . B CA 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc5 B O GLY 623 B GLY 623 1_555 M CA CA . B CA 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc6 B OD1 ASN 869 B ASN 869 1_555 L CA CA . B CA 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc7 C O LEU 621 C LEU 621 1_555 S CA CA . C CA 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc8 C O GLY 623 C GLY 623 1_555 S CA CA . C CA 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc9 C OD1 ASN 869 C ASN 869 1_555 R CA CA . C CA 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc10 D O LEU 621 D LEU 621 1_555 AA CA CA . D CA 6005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc11 D O GLY 623 D GLY 623 1_555 AA CA CA . D CA 6005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc12 D OD1 ASN 869 D ASN 869 1_555 Z CA CA . D CA 6004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 132 n n C1 C10 CLR sing 133 n n C1 H11 CLR sing 134 n n C1 H12 CLR sing 135 n n C2 C3 CLR sing 136 n n C2 H21 CLR sing 137 n n C2 H22 CLR sing 138 n n C3 C4 CLR sing 139 n n C3 O1 CLR sing 140 n n C3 H3 CLR sing 141 n n C4 C5 CLR sing 142 n n C4 H41 CLR sing 143 n n C4 H42 CLR sing 144 n n C5 C6 CLR doub 145 n n C5 C10 CLR sing 146 n n C6 C7 CLR sing 147 n n C6 H6 CLR sing 148 n n C7 C8 CLR sing 149 n n C7 H71 CLR sing 150 n n C7 H72 CLR sing 151 n n C8 C9 CLR sing 152 n n C8 C14 CLR sing 153 n n C8 H8 CLR sing 154 n n C9 C10 CLR sing 155 n n C9 C11 CLR sing 156 n n C9 H9 CLR sing 157 n n C10 C19 CLR sing 158 n n C11 C12 CLR sing 159 n n C11 H111 CLR sing 160 n n C11 H112 CLR sing 161 n n C12 C13 CLR sing 162 n n C12 H121 CLR sing 163 n n C12 H122 CLR sing 164 n n C13 C14 CLR sing 165 n n C13 C17 CLR sing 166 n n C13 C18 CLR sing 167 n n C14 C15 CLR sing 168 n n C14 H14 CLR sing 169 n n C15 C16 CLR sing 170 n n C15 H151 CLR sing 171 n n C15 H152 CLR sing 172 n n C16 C17 CLR sing 173 n n C16 H161 CLR sing 174 n n C16 H162 CLR sing 175 n n C17 C20 CLR sing 176 n n C17 H17 CLR sing 177 n n C18 H181 CLR sing 178 n n C18 H182 CLR sing 179 n n C18 H183 CLR sing 180 n n C19 H191 CLR sing 181 n n C19 H192 CLR sing 182 n n C19 H193 CLR sing 183 n n C20 C21 CLR sing 184 n n C20 C22 CLR sing 185 n n C20 H20 CLR sing 186 n n C21 H211 CLR sing 187 n n C21 H212 CLR sing 188 n n C21 H213 CLR sing 189 n n C22 C23 CLR sing 190 n n C22 H221 CLR sing 191 n n C22 H222 CLR sing 192 n n C23 C24 CLR sing 193 n n C23 H231 CLR sing 194 n n C23 H232 CLR sing 195 n n C24 C25 CLR sing 196 n n C24 H241 CLR sing 197 n n C24 H242 CLR sing 198 n n C25 C26 CLR sing 199 n n C25 C27 CLR sing 200 n n C25 H25 CLR sing 201 n n C26 H261 CLR sing 202 n n C26 H262 CLR sing 203 n n C26 H263 CLR sing 204 n n C27 H271 CLR sing 205 n n C27 H272 CLR sing 206 n n C27 H273 CLR sing 207 n n O1 H1 CLR sing 208 n n # _atom_sites.entry_id 8SRK _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 APR A 1 1701 1701 APR APR . F 3 CA A 1 1702 3001 CA CA . G 3 CA A 1 1703 3002 CA CA . H 4 CLR A 1 1704 6003 CLR CLR . I 4 CLR A 1 1705 6001 CLR CLR . J 4 CLR A 1 1706 6002 CLR CLR . K 2 APR B 1 1701 1701 APR APR . L 3 CA B 1 1702 3001 CA CA . M 3 CA B 1 1703 3002 CA CA . N 4 CLR B 1 1704 6003 CLR CLR . O 4 CLR B 1 1705 6001 CLR CLR . P 4 CLR B 1 1706 6002 CLR CLR . Q 2 APR C 1 1701 1701 APR APR . R 3 CA C 1 1702 3001 CA CA . S 3 CA C 1 1703 3002 CA CA . T 4 CLR C 1 1704 6003 CLR CLR . U 4 CLR C 1 1705 6001 CLR CLR . V 4 CLR C 1 1706 6002 CLR CLR . W 4 CLR D 1 6001 6001 CLR CLR . X 4 CLR D 1 6002 6002 CLR CLR . Y 2 APR D 1 6003 1701 APR APR . Z 3 CA D 1 6004 3001 CA CA . AA 3 CA D 1 6005 3002 CA CA . BA 4 CLR D 1 6006 6003 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . O 4 162.775 154.872 216.777 1 81.31 ? C1 CLR 1705 B 1 HETATM 2 C C2 CLR . . . O 4 163.519 154.747 218.105 1 81.31 ? C2 CLR 1705 B 1 HETATM 3 C C3 CLR . . . O 4 163.054 155.783 219.096 1 81.31 ? C3 CLR 1705 B 1 HETATM 4 C C4 CLR . . . O 4 163.158 157.169 218.494 1 81.31 ? C4 CLR 1705 B 1 HETATM 5 C C5 CLR . . . O 4 163.693 157.154 217.08 1 81.31 ? C5 CLR 1705 B 1 HETATM 6 C C6 CLR . . . O 4 164.734 157.895 216.745 1 81.31 ? C6 CLR 1705 B 1 HETATM 7 C C7 CLR . . . O 4 165.228 158.108 215.351 1 81.31 ? C7 CLR 1705 B 1 HETATM 8 C C8 CLR . . . O 4 164.415 157.375 214.293 1 81.31 ? C8 CLR 1705 B 1 HETATM 9 C C9 CLR . . . O 4 163.88 156.045 214.848 1 81.31 ? C9 CLR 1705 B 1 HETATM 10 C C10 CLR . . . O 4 162.983 156.24 216.095 1 81.31 ? C10 CLR 1705 B 1 HETATM 11 C C11 CLR . . . O 4 163.192 155.219 213.753 1 81.31 ? C11 CLR 1705 B 1 HETATM 12 C C12 CLR . . . O 4 164.06 155.021 212.506 1 81.31 ? C12 CLR 1705 B 1 HETATM 13 C C13 CLR . . . O 4 164.565 156.351 211.946 1 81.31 ? C13 CLR 1705 B 1 HETATM 14 C C14 CLR . . . O 4 165.291 157.072 213.092 1 81.31 ? C14 CLR 1705 B 1 HETATM 15 C C15 CLR . . . O 4 166.035 158.217 212.415 1 81.31 ? C15 CLR 1705 B 1 HETATM 16 C C16 CLR . . . O 4 166.36 157.679 211.009 1 81.31 ? C16 CLR 1705 B 1 HETATM 17 C C17 CLR . . . O 4 165.717 156.274 210.91 1 81.31 ? C17 CLR 1705 B 1 HETATM 18 C C18 CLR . . . O 4 163.406 157.18 211.376 1 81.31 ? C18 CLR 1705 B 1 HETATM 19 C C19 CLR . . . O 4 161.624 156.862 215.731 1 81.31 ? C19 CLR 1705 B 1 HETATM 20 C C20 CLR . . . O 4 165.383 155.901 209.459 1 81.31 ? C20 CLR 1705 B 1 HETATM 21 C C21 CLR . . . O 4 165.811 154.48 209.106 1 81.31 ? C21 CLR 1705 B 1 HETATM 22 C C22 CLR . . . O 4 166.026 156.911 208.5 1 81.31 ? C22 CLR 1705 B 1 HETATM 23 C C23 CLR . . . O 4 165.9 156.57 207.042 1 81.31 ? C23 CLR 1705 B 1 HETATM 24 C C24 CLR . . . O 4 167.233 156.378 206.368 1 81.31 ? C24 CLR 1705 B 1 HETATM 25 C C25 CLR . . . O 4 167.674 157.522 205.467 1 81.31 ? C25 CLR 1705 B 1 HETATM 26 C C26 CLR . . . O 4 168.665 157.05 204.417 1 81.31 ? C26 CLR 1705 B 1 HETATM 27 C C27 CLR . . . O 4 166.48 158.196 204.813 1 81.31 ? C27 CLR 1705 B 1 HETATM 28 O O1 CLR . . . O 4 161.689 155.528 219.445 1 81.31 ? O1 CLR 1705 B 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 55 _model_server_stats.query_time_ms 369 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #