data_8SRY # _model_server_result.job_id 2ePHOVo1_eNkG3Uup_d6OA _model_server_result.datetime_utc '2025-04-08 16:03:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sry # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":202}' # _entry.id 8SRY # _exptl.entry_id 8SRY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8SRY _cell.length_a 43.963 _cell.length_b 43.963 _cell.length_c 220.041 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SRY _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 384 n n O1 HO1 PG4 sing 385 n n C1 C2 PG4 sing 386 n n C1 H11 PG4 sing 387 n n C1 H12 PG4 sing 388 n n C2 O2 PG4 sing 389 n n C2 H21 PG4 sing 390 n n C2 H22 PG4 sing 391 n n O2 C3 PG4 sing 392 n n C3 C4 PG4 sing 393 n n C3 H31 PG4 sing 394 n n C3 H32 PG4 sing 395 n n C4 O3 PG4 sing 396 n n C4 H41 PG4 sing 397 n n C4 H42 PG4 sing 398 n n O3 C5 PG4 sing 399 n n C5 C6 PG4 sing 400 n n C5 H51 PG4 sing 401 n n C5 H52 PG4 sing 402 n n C6 O4 PG4 sing 403 n n C6 H61 PG4 sing 404 n n C6 H62 PG4 sing 405 n n O4 C7 PG4 sing 406 n n C7 C8 PG4 sing 407 n n C7 H71 PG4 sing 408 n n C7 H72 PG4 sing 409 n n C8 O5 PG4 sing 410 n n C8 H81 PG4 sing 411 n n C8 H82 PG4 sing 412 n n O5 HO5 PG4 sing 413 n n # _atom_sites.entry_id 8SRY _atom_sites.fract_transf_matrix[1][1] 0.022746 _atom_sites.fract_transf_matrix[1][2] 0.013133 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026265 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004545 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PG0 A 1 201 5 PG0 PG0 . F 4 PEG B 1 201 3 PEG PEG . G 5 N8E B 1 202 4 N8E N8E . H 6 P33 C 1 201 2 P33 P33 . I 4 PEG D 1 201 1 PEG PEG . J 7 PG4 D 1 202 3 PG4 PG4 . K 8 HOH A 1 301 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . J 7 22.748 15.986 4.61 1 69.1 ? O1 PG4 202 D 1 HETATM 2 C C1 PG4 . . . J 7 24.001 15.482 5.05 1 53.46 ? C1 PG4 202 D 1 HETATM 3 C C2 PG4 . . . J 7 24.8 14.928 3.837 1 56.11 ? C2 PG4 202 D 1 HETATM 4 O O2 PG4 . . . J 7 26.176 14.895 4.157 1 61.77 ? O2 PG4 202 D 1 HETATM 5 C C3 PG4 . . . J 7 26.552 13.811 4.984 1 64.13 ? C3 PG4 202 D 1 HETATM 6 C C4 PG4 . . . J 7 27.868 14.137 5.693 1 66.15 ? C4 PG4 202 D 1 HETATM 7 O O3 PG4 . . . J 7 28.956 13.69 4.909 1 75.6 ? O3 PG4 202 D 1 HETATM 8 C C5 PG4 . . . J 7 30.192 14.315 5.162 1 74.16 ? C5 PG4 202 D 1 HETATM 9 C C6 PG4 . . . J 7 30.75 14.869 3.84 1 65.48 ? C6 PG4 202 D 1 HETATM 10 O O4 PG4 . . . J 7 32.02 15.482 4.043 1 73.74 ? O4 PG4 202 D 1 HETATM 11 C C7 PG4 . . . J 7 33.145 14.705 3.651 1 74.51 ? C7 PG4 202 D 1 HETATM 12 C C8 PG4 . . . J 7 33.875 14.166 4.91 1 76.63 ? C8 PG4 202 D 1 HETATM 13 O O5 PG4 . . . J 7 34.44 12.905 4.63 1 75.47 ? O5 PG4 202 D 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #