data_8SS6
#
_model_server_result.job_id            ucDEY9MsNtHsK5xdJUN1Jw 
_model_server_result.datetime_utc      '2024-11-25 21:53:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ss6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"RA","auth_seq_id":1107}' 
#
_entry.id    8SS6 
#
_exptl.entry_id    8SS6 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              787.121 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    28 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8SS6 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SS6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 O N N 
? 5 P N N 
? 5 T N N 
? 5 U N N 
? 5 V N N 
? 5 W N N 
? 5 Z N N 
? 5 CA N N 
? 5 DA N N 
? 5 EA N N 
? 5 FA N N 
? 5 IA N N 
? 5 JA N N 
? 5 LA N N 
? 5 OA N N 
? 5 PA N N 
? 5 QA N N 
? 5 RA N N 
? 5 UA N N 
? 5 VA N N 
? 5 WA N N 
? 5 XA N N 
? 5 YA N N 
? 5 ZA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 54 A CYS 63 1_555 A SG CYS 306 A CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf2 A SG CYS 580 A CYS 589 1_555 D SG CYS 580 D CYS 589 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
disulf ? disulf3 A SG CYS 709 A CYS 718 1_555 A SG CYS 764 A CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf4 A SG CYS 881 A CYS 890 1_555 A SG CYS 891 A CYS 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf5 B SG CYS 54 B CYS 63 1_555 B SG CYS 306 B CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf6 B SG CYS 580 B CYS 589 1_555 C SG CYS 580 C CYS 589 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? 
disulf ? disulf7 B SG CYS 709 B CYS 718 1_555 B SG CYS 764 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf8 C SG CYS 54 C CYS 63 1_555 C SG CYS 306 C CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf9 C SG CYS 709 C CYS 718 1_555 C SG CYS 764 C CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf10 C SG CYS 881 C CYS 890 1_555 C SG CYS 891 C CYS 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf11 D SG CYS 54 D CYS 63 1_555 D SG CYS 306 D CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf12 D SG CYS 709 D CYS 718 1_555 D SG CYS 764 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C44 H85 N O8 P 1' 
_chem_comp.formula_weight    787.121 
_chem_comp.id                PCW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     (Z,Z)-4-HYDROXY-N,N,N-TRIMETHYL-10-OXO-7-[(1-OXO-9-OCTADECENYL)OXY]-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-18-EN-1-AMINIUM-4-OXIDE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 PCW sing 357 n n 
C1 O3P PCW sing 358 n n 
C1 H11 PCW sing 359 n n 
C1 H12 PCW sing 360 n n 
C2 C3 PCW sing 361 n n 
C2 O2 PCW sing 362 n n 
C2 H2 PCW sing 363 n n 
C3 O3 PCW sing 364 n n 
C3 H31 PCW sing 365 n n 
C3 H32 PCW sing 366 n n 
C4 C5 PCW sing 367 n n 
C4 O4P PCW sing 368 n n 
C4 H41 PCW sing 369 n n 
C4 H42 PCW sing 370 n n 
C5 N PCW sing 371 n n 
C5 H51 PCW sing 372 n n 
C5 H52 PCW sing 373 n n 
C6 N PCW sing 374 n n 
C6 H61 PCW sing 375 n n 
C6 H62 PCW sing 376 n n 
C6 H63 PCW sing 377 n n 
C7 N PCW sing 378 n n 
C7 H71 PCW sing 379 n n 
C7 H72 PCW sing 380 n n 
C7 H73 PCW sing 381 n n 
C8 N PCW sing 382 n n 
C8 H81 PCW sing 383 n n 
C8 H82 PCW sing 384 n n 
C8 H83 PCW sing 385 n n 
C11 C12 PCW sing 386 n n 
C11 O3 PCW sing 387 n n 
C11 O11 PCW doub 388 n n 
C12 C13 PCW sing 389 n n 
C12 H121 PCW sing 390 n n 
C12 H122 PCW sing 391 n n 
C13 C14 PCW sing 392 n n 
C13 H131 PCW sing 393 n n 
C13 H132 PCW sing 394 n n 
C14 C15 PCW sing 395 n n 
C14 H141 PCW sing 396 n n 
C14 H142 PCW sing 397 n n 
C15 C16 PCW sing 398 n n 
C15 H151 PCW sing 399 n n 
C15 H152 PCW sing 400 n n 
C16 C17 PCW sing 401 n n 
C16 H161 PCW sing 402 n n 
C16 H162 PCW sing 403 n n 
C17 C18 PCW sing 404 n n 
C17 H171 PCW sing 405 n n 
C17 H172 PCW sing 406 n n 
C18 C19 PCW sing 407 n n 
C18 H181 PCW sing 408 n n 
C18 H182 PCW sing 409 n n 
C19 C20 PCW doub 410 z n 
C19 H19 PCW sing 411 n n 
C20 C21 PCW sing 412 n n 
C20 H20 PCW sing 413 n n 
C21 C22 PCW sing 414 n n 
C21 H211 PCW sing 415 n n 
C21 H212 PCW sing 416 n n 
C22 C23 PCW sing 417 n n 
C22 H221 PCW sing 418 n n 
C22 H222 PCW sing 419 n n 
C23 C24 PCW sing 420 n n 
C23 H231 PCW sing 421 n n 
C23 H232 PCW sing 422 n n 
C24 C25 PCW sing 423 n n 
C24 H241 PCW sing 424 n n 
C24 H242 PCW sing 425 n n 
C25 C26 PCW sing 426 n n 
C25 H251 PCW sing 427 n n 
C25 H252 PCW sing 428 n n 
C26 C27 PCW sing 429 n n 
C26 H261 PCW sing 430 n n 
C26 H262 PCW sing 431 n n 
C27 C28 PCW sing 432 n n 
C27 H271 PCW sing 433 n n 
C27 H272 PCW sing 434 n n 
C28 H281 PCW sing 435 n n 
C28 H282 PCW sing 436 n n 
C28 H283 PCW sing 437 n n 
C31 C32 PCW sing 438 n n 
C31 O2 PCW sing 439 n n 
C31 O31 PCW doub 440 n n 
C32 C33 PCW sing 441 n n 
C32 H321 PCW sing 442 n n 
C32 H322 PCW sing 443 n n 
C33 C34 PCW sing 444 n n 
C33 H331 PCW sing 445 n n 
C33 H332 PCW sing 446 n n 
C34 C35 PCW sing 447 n n 
C34 H341 PCW sing 448 n n 
C34 H342 PCW sing 449 n n 
C35 C36 PCW sing 450 n n 
C35 H351 PCW sing 451 n n 
C35 H352 PCW sing 452 n n 
C36 C37 PCW sing 453 n n 
C36 H361 PCW sing 454 n n 
C36 H362 PCW sing 455 n n 
C37 C38 PCW sing 456 n n 
C37 H371 PCW sing 457 n n 
C37 H372 PCW sing 458 n n 
C38 C39 PCW sing 459 n n 
C38 H381 PCW sing 460 n n 
C38 H382 PCW sing 461 n n 
C39 C40 PCW doub 462 z n 
C39 H39 PCW sing 463 n n 
C40 C41 PCW sing 464 n n 
C40 H40 PCW sing 465 n n 
C41 C42 PCW sing 466 n n 
C41 H411 PCW sing 467 n n 
C41 H412 PCW sing 468 n n 
C42 C43 PCW sing 469 n n 
C42 H421 PCW sing 470 n n 
C42 H422 PCW sing 471 n n 
C43 C44 PCW sing 472 n n 
C43 H431 PCW sing 473 n n 
C43 H432 PCW sing 474 n n 
C44 C45 PCW sing 475 n n 
C44 H441 PCW sing 476 n n 
C44 H442 PCW sing 477 n n 
C45 C46 PCW sing 478 n n 
C45 H451 PCW sing 479 n n 
C45 H452 PCW sing 480 n n 
C46 C47 PCW sing 481 n n 
C46 H461 PCW sing 482 n n 
C46 H462 PCW sing 483 n n 
C47 C48 PCW sing 484 n n 
C47 H471 PCW sing 485 n n 
C47 H472 PCW sing 486 n n 
C48 H481 PCW sing 487 n n 
C48 H482 PCW sing 488 n n 
C48 H483 PCW sing 489 n n 
O1P P PCW sing 490 n n 
O1P H1P PCW sing 491 n n 
O2P P PCW doub 492 n n 
O3P P PCW sing 493 n n 
O4P P PCW sing 494 n n 
#
_atom_sites.entry_id                     8SS6 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 6ZP A 1 1101 1100 6ZP 6ZP . 
H 4 ZK1 A 1 1102 1101 ZK1 ZK1 . 
I 5 PCW A 1 1103 1102 PCW PCW . 
J 5 PCW A 1 1104 1103 PCW PCW . 
K 5 PCW A 1 1105 1105 PCW PCW . 
L 5 PCW A 1 1106 1106 PCW PCW . 
M 6 CLR A 1 1107 1108 CLR CLR . 
N 6 CLR A 1 1108 1109 CLR CLR . 
O 5 PCW A 1 1109 1104 PCW PCW . 
P 5 PCW A 1 1110 1110 PCW PCW . 
Q 7 NA A 1 1111 1 NA NA . 
R 3 6ZP B 1 1101 1100 6ZP 6ZP . 
S 4 ZK1 B 1 1102 1101 ZK1 ZK1 . 
T 5 PCW B 1 1103 1102 PCW PCW . 
U 5 PCW B 1 1104 1105 PCW PCW . 
V 5 PCW B 1 1105 1106 PCW PCW . 
W 5 PCW B 1 1106 1107 PCW PCW . 
X 6 CLR B 1 1107 1108 CLR CLR . 
Y 6 CLR B 1 1108 1109 CLR CLR . 
Z 5 PCW B 1 1109 1104 PCW PCW . 
AA 3 6ZP C 1 1101 1100 6ZP 6ZP . 
BA 4 ZK1 C 1 1102 1101 ZK1 ZK1 . 
CA 5 PCW C 1 1103 1102 PCW PCW . 
DA 5 PCW C 1 1104 1103 PCW PCW . 
EA 5 PCW C 1 1105 1105 PCW PCW . 
FA 5 PCW C 1 1106 1106 PCW PCW . 
GA 6 CLR C 1 1107 1108 CLR CLR . 
HA 6 CLR C 1 1108 1109 CLR CLR . 
IA 5 PCW C 1 1109 1104 PCW PCW . 
JA 5 PCW C 1 1110 1110 PCW PCW . 
KA 8 SPD C 1 1111 2 SPD SPD . 
LA 5 PCW D 1 1101 1104 PCW PCW . 
MA 3 6ZP D 1 1102 1100 6ZP 6ZP . 
NA 4 ZK1 D 1 1103 1101 ZK1 ZK1 . 
OA 5 PCW D 1 1104 1102 PCW PCW . 
PA 5 PCW D 1 1105 1105 PCW PCW . 
QA 5 PCW D 1 1106 1106 PCW PCW . 
RA 5 PCW D 1 1107 1107 PCW PCW . 
SA 6 CLR D 1 1108 1108 CLR CLR . 
TA 6 CLR D 1 1109 1109 CLR CLR . 
UA 5 PCW E 1 201 1107 PCW PCW . 
VA 5 PCW E 1 202 1110 PCW PCW . 
WA 5 PCW E 1 203 1103 PCW PCW . 
XA 5 PCW F 1 201 1103 PCW PCW . 
YA 5 PCW F 1 202 1107 PCW PCW . 
ZA 5 PCW F 1 203 1110 PCW PCW . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 PCW . . . RA 5 223.872 190.205 149.211 1 28.52 ? C13 PCW 1107 D 1 
HETATM 2 C C14 PCW . . . RA 5 224.026 191.348 148.169 1 28.52 ? C14 PCW 1107 D 1 
HETATM 3 C C15 PCW . . . RA 5 223.661 190.899 146.723 1 28.52 ? C15 PCW 1107 D 1 
HETATM 4 C C16 PCW . . . RA 5 224.536 191.61 145.649 1 28.52 ? C16 PCW 1107 D 1 
HETATM 5 C C17 PCW . . . RA 5 224 191.381 144.205 1 28.52 ? C17 PCW 1107 D 1 
HETATM 6 C C18 PCW . . . RA 5 222.891 192.406 143.831 1 28.52 ? C18 PCW 1107 D 1 
HETATM 7 C C19 PCW . . . RA 5 222.605 192.436 142.307 1 28.52 ? C19 PCW 1107 D 1 
HETATM 8 C C20 PCW . . . RA 5 221.456 192.969 141.851 1 28.52 ? C20 PCW 1107 D 1 
HETATM 9 C C21 PCW . . . RA 5 221.174 193 140.333 1 28.52 ? C21 PCW 1107 D 1 
HETATM 10 C C22 PCW . . . RA 5 219.715 192.588 139.993 1 28.52 ? C22 PCW 1107 D 1 
HETATM 11 C C23 PCW . . . RA 5 219.626 191.832 138.639 1 28.52 ? C23 PCW 1107 D 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    45 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           11 
#