data_8SS6
#
_model_server_result.job_id            5t75v_oIs_1uB-0btoI7tQ 
_model_server_result.datetime_utc      '2024-11-25 21:31:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ss6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"HA","auth_seq_id":1108}' 
#
_entry.id    8SS6 
#
_exptl.entry_id    8SS6 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              386.654 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            CHOLESTEROL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8SS6 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SS6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 M N N 
? 6 N N N 
? 6 X N N 
? 6 Y N N 
? 6 GA N N 
? 6 HA N N 
? 6 SA N N 
? 6 TA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 54 A CYS 63 1_555 A SG CYS 306 A CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf2 A SG CYS 580 A CYS 589 1_555 D SG CYS 580 D CYS 589 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
disulf ? disulf3 A SG CYS 709 A CYS 718 1_555 A SG CYS 764 A CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf4 A SG CYS 881 A CYS 890 1_555 A SG CYS 891 A CYS 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf5 B SG CYS 54 B CYS 63 1_555 B SG CYS 306 B CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf6 B SG CYS 580 B CYS 589 1_555 C SG CYS 580 C CYS 589 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? 
disulf ? disulf7 B SG CYS 709 B CYS 718 1_555 B SG CYS 764 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf8 C SG CYS 54 C CYS 63 1_555 C SG CYS 306 C CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf9 C SG CYS 709 C CYS 718 1_555 C SG CYS 764 C CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf10 C SG CYS 881 C CYS 890 1_555 C SG CYS 891 C CYS 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf11 D SG CYS 54 D CYS 63 1_555 D SG CYS 306 D CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf12 D SG CYS 709 D CYS 718 1_555 D SG CYS 764 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C27 H46 O' 
_chem_comp.formula_weight    386.654 
_chem_comp.id                CLR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              CHOLESTEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 CLR sing 115 n n 
C1 C10 CLR sing 116 n n 
C1 H11 CLR sing 117 n n 
C1 H12 CLR sing 118 n n 
C2 C3 CLR sing 119 n n 
C2 H21 CLR sing 120 n n 
C2 H22 CLR sing 121 n n 
C3 C4 CLR sing 122 n n 
C3 O1 CLR sing 123 n n 
C3 H3 CLR sing 124 n n 
C4 C5 CLR sing 125 n n 
C4 H41 CLR sing 126 n n 
C4 H42 CLR sing 127 n n 
C5 C6 CLR doub 128 n n 
C5 C10 CLR sing 129 n n 
C6 C7 CLR sing 130 n n 
C6 H6 CLR sing 131 n n 
C7 C8 CLR sing 132 n n 
C7 H71 CLR sing 133 n n 
C7 H72 CLR sing 134 n n 
C8 C9 CLR sing 135 n n 
C8 C14 CLR sing 136 n n 
C8 H8 CLR sing 137 n n 
C9 C10 CLR sing 138 n n 
C9 C11 CLR sing 139 n n 
C9 H9 CLR sing 140 n n 
C10 C19 CLR sing 141 n n 
C11 C12 CLR sing 142 n n 
C11 H111 CLR sing 143 n n 
C11 H112 CLR sing 144 n n 
C12 C13 CLR sing 145 n n 
C12 H121 CLR sing 146 n n 
C12 H122 CLR sing 147 n n 
C13 C14 CLR sing 148 n n 
C13 C17 CLR sing 149 n n 
C13 C18 CLR sing 150 n n 
C14 C15 CLR sing 151 n n 
C14 H14 CLR sing 152 n n 
C15 C16 CLR sing 153 n n 
C15 H151 CLR sing 154 n n 
C15 H152 CLR sing 155 n n 
C16 C17 CLR sing 156 n n 
C16 H161 CLR sing 157 n n 
C16 H162 CLR sing 158 n n 
C17 C20 CLR sing 159 n n 
C17 H17 CLR sing 160 n n 
C18 H181 CLR sing 161 n n 
C18 H182 CLR sing 162 n n 
C18 H183 CLR sing 163 n n 
C19 H191 CLR sing 164 n n 
C19 H192 CLR sing 165 n n 
C19 H193 CLR sing 166 n n 
C20 C21 CLR sing 167 n n 
C20 C22 CLR sing 168 n n 
C20 H20 CLR sing 169 n n 
C21 H211 CLR sing 170 n n 
C21 H212 CLR sing 171 n n 
C21 H213 CLR sing 172 n n 
C22 C23 CLR sing 173 n n 
C22 H221 CLR sing 174 n n 
C22 H222 CLR sing 175 n n 
C23 C24 CLR sing 176 n n 
C23 H231 CLR sing 177 n n 
C23 H232 CLR sing 178 n n 
C24 C25 CLR sing 179 n n 
C24 H241 CLR sing 180 n n 
C24 H242 CLR sing 181 n n 
C25 C26 CLR sing 182 n n 
C25 C27 CLR sing 183 n n 
C25 H25 CLR sing 184 n n 
C26 H261 CLR sing 185 n n 
C26 H262 CLR sing 186 n n 
C26 H263 CLR sing 187 n n 
C27 H271 CLR sing 188 n n 
C27 H272 CLR sing 189 n n 
C27 H273 CLR sing 190 n n 
O1 H1 CLR sing 191 n n 
#
_atom_sites.entry_id                     8SS6 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 6ZP A 1 1101 1100 6ZP 6ZP . 
H 4 ZK1 A 1 1102 1101 ZK1 ZK1 . 
I 5 PCW A 1 1103 1102 PCW PCW . 
J 5 PCW A 1 1104 1103 PCW PCW . 
K 5 PCW A 1 1105 1105 PCW PCW . 
L 5 PCW A 1 1106 1106 PCW PCW . 
M 6 CLR A 1 1107 1108 CLR CLR . 
N 6 CLR A 1 1108 1109 CLR CLR . 
O 5 PCW A 1 1109 1104 PCW PCW . 
P 5 PCW A 1 1110 1110 PCW PCW . 
Q 7 NA A 1 1111 1 NA NA . 
R 3 6ZP B 1 1101 1100 6ZP 6ZP . 
S 4 ZK1 B 1 1102 1101 ZK1 ZK1 . 
T 5 PCW B 1 1103 1102 PCW PCW . 
U 5 PCW B 1 1104 1105 PCW PCW . 
V 5 PCW B 1 1105 1106 PCW PCW . 
W 5 PCW B 1 1106 1107 PCW PCW . 
X 6 CLR B 1 1107 1108 CLR CLR . 
Y 6 CLR B 1 1108 1109 CLR CLR . 
Z 5 PCW B 1 1109 1104 PCW PCW . 
AA 3 6ZP C 1 1101 1100 6ZP 6ZP . 
BA 4 ZK1 C 1 1102 1101 ZK1 ZK1 . 
CA 5 PCW C 1 1103 1102 PCW PCW . 
DA 5 PCW C 1 1104 1103 PCW PCW . 
EA 5 PCW C 1 1105 1105 PCW PCW . 
FA 5 PCW C 1 1106 1106 PCW PCW . 
GA 6 CLR C 1 1107 1108 CLR CLR . 
HA 6 CLR C 1 1108 1109 CLR CLR . 
IA 5 PCW C 1 1109 1104 PCW PCW . 
JA 5 PCW C 1 1110 1110 PCW PCW . 
KA 8 SPD C 1 1111 2 SPD SPD . 
LA 5 PCW D 1 1101 1104 PCW PCW . 
MA 3 6ZP D 1 1102 1100 6ZP 6ZP . 
NA 4 ZK1 D 1 1103 1101 ZK1 ZK1 . 
OA 5 PCW D 1 1104 1102 PCW PCW . 
PA 5 PCW D 1 1105 1105 PCW PCW . 
QA 5 PCW D 1 1106 1106 PCW PCW . 
RA 5 PCW D 1 1107 1107 PCW PCW . 
SA 6 CLR D 1 1108 1108 CLR CLR . 
TA 6 CLR D 1 1109 1109 CLR CLR . 
UA 5 PCW E 1 201 1107 PCW PCW . 
VA 5 PCW E 1 202 1110 PCW PCW . 
WA 5 PCW E 1 203 1103 PCW PCW . 
XA 5 PCW F 1 201 1103 PCW PCW . 
YA 5 PCW F 1 202 1107 PCW PCW . 
ZA 5 PCW F 1 203 1110 PCW PCW . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CLR . . . HA 6 203.926 214.147 134.615 1 69.53 ? C1 CLR 1108 C 1 
HETATM 2 C C2 CLR . . . HA 6 203.967 214.049 133.51 1 69.53 ? C2 CLR 1108 C 1 
HETATM 3 C C3 CLR . . . HA 6 205.177 213.738 132.911 1 69.53 ? C3 CLR 1108 C 1 
HETATM 4 C C4 CLR . . . HA 6 206.043 212.591 133.783 1 69.53 ? C4 CLR 1108 C 1 
HETATM 5 C C5 CLR . . . HA 6 206.069 212.677 134.787 1 69.53 ? C5 CLR 1108 C 1 
HETATM 6 C C6 CLR . . . HA 6 207.109 212.976 135.102 1 69.53 ? C6 CLR 1108 C 1 
HETATM 7 C C7 CLR . . . HA 6 207.244 214.398 136.047 1 69.53 ? C7 CLR 1108 C 1 
HETATM 8 C C8 CLR . . . HA 6 206.382 214.401 137.121 1 69.53 ? C8 CLR 1108 C 1 
HETATM 9 C C9 CLR . . . HA 6 205.213 213.909 136.969 1 69.53 ? C9 CLR 1108 C 1 
HETATM 10 C C10 CLR . . . HA 6 204.873 213.195 135.515 1 69.53 ? C10 CLR 1108 C 1 
HETATM 11 C C11 CLR . . . HA 6 203.95 214.821 137.485 1 69.53 ? C11 CLR 1108 C 1 
HETATM 12 C C12 CLR . . . HA 6 204.322 215.585 138.777 1 69.53 ? C12 CLR 1108 C 1 
HETATM 13 C C13 CLR . . . HA 6 205.3 216.592 138.498 1 69.53 ? C13 CLR 1108 C 1 
HETATM 14 C C14 CLR . . . HA 6 206.455 216.104 137.847 1 69.53 ? C14 CLR 1108 C 1 
HETATM 15 C C15 CLR . . . HA 6 207.669 216.291 138.877 1 69.53 ? C15 CLR 1108 C 1 
HETATM 16 C C16 CLR . . . HA 6 206.909 216.203 140.265 1 69.53 ? C16 CLR 1108 C 1 
HETATM 17 C C17 CLR . . . HA 6 205.87 217.119 139.956 1 69.53 ? C17 CLR 1108 C 1 
HETATM 18 C C18 CLR . . . HA 6 204.655 217.762 137.7 1 69.53 ? C18 CLR 1108 C 1 
HETATM 19 C C19 CLR . . . HA 6 204.008 211.946 135.887 1 69.53 ? C19 CLR 1108 C 1 
HETATM 20 C C20 CLR . . . HA 6 204.843 217.367 141.059 1 69.53 ? C20 CLR 1108 C 1 
HETATM 21 C C21 CLR . . . HA 6 204.92 218.874 141.28 1 69.53 ? C21 CLR 1108 C 1 
HETATM 22 C C22 CLR . . . HA 6 205.15 216.678 142.422 1 69.53 ? C22 CLR 1108 C 1 
HETATM 23 C C23 CLR . . . HA 6 204.262 217.21 143.596 1 69.53 ? C23 CLR 1108 C 1 
HETATM 24 C C24 CLR . . . HA 6 205.093 217.664 144.84 1 69.53 ? C24 CLR 1108 C 1 
HETATM 25 C C25 CLR . . . HA 6 204.859 219.168 145.191 1 69.53 ? C25 CLR 1108 C 1 
HETATM 26 C C26 CLR . . . HA 6 204.356 219.338 146.646 1 69.53 ? C26 CLR 1108 C 1 
HETATM 27 C C27 CLR . . . HA 6 206.145 220.007 144.95 1 69.53 ? C27 CLR 1108 C 1 
HETATM 28 O O1 CLR . . . HA 6 204.936 213.232 131.573 1 69.53 ? O1 CLR 1108 C 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    72 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           28 
#