data_8SSM # _model_server_result.job_id clrLBPRlAwT2uDBbs0ZIvQ _model_server_result.datetime_utc '2024-10-11 03:20:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ssm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 8SSM # _exptl.entry_id 8SSM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SSM _cell.length_a 79.349 _cell.length_b 114.41 _cell.length_c 114.639 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SSM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,H 1 1 C,D,F,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 8SSM _atom_sites.fract_transf_matrix[1][1] 0.012603 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008723 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL C 1 101 101 GOL GOL . F 3 GOL A 1 501 501 GOL GOL . G 4 HOH B 1 401 37 HOH HOH . G 4 HOH B 2 402 57 HOH HOH . G 4 HOH B 3 403 119 HOH HOH . G 4 HOH B 4 404 153 HOH HOH . G 4 HOH B 5 405 15 HOH HOH . G 4 HOH B 6 406 123 HOH HOH . G 4 HOH B 7 407 161 HOH HOH . G 4 HOH B 8 408 96 HOH HOH . G 4 HOH B 9 409 104 HOH HOH . G 4 HOH B 10 410 148 HOH HOH . G 4 HOH B 11 411 1 HOH HOH . G 4 HOH B 12 412 131 HOH HOH . G 4 HOH B 13 413 67 HOH HOH . G 4 HOH B 14 414 4 HOH HOH . G 4 HOH B 15 415 157 HOH HOH . G 4 HOH B 16 416 16 HOH HOH . G 4 HOH B 17 417 17 HOH HOH . G 4 HOH B 18 418 71 HOH HOH . G 4 HOH B 19 419 83 HOH HOH . G 4 HOH B 20 420 24 HOH HOH . G 4 HOH B 21 421 182 HOH HOH . G 4 HOH B 22 422 6 HOH HOH . G 4 HOH B 23 423 12 HOH HOH . G 4 HOH B 24 424 27 HOH HOH . G 4 HOH B 25 425 9 HOH HOH . G 4 HOH B 26 426 85 HOH HOH . G 4 HOH B 27 427 31 HOH HOH . G 4 HOH B 28 428 69 HOH HOH . G 4 HOH B 29 429 86 HOH HOH . G 4 HOH B 30 430 33 HOH HOH . G 4 HOH B 31 431 72 HOH HOH . G 4 HOH B 32 432 159 HOH HOH . G 4 HOH B 33 433 93 HOH HOH . G 4 HOH B 34 434 40 HOH HOH . G 4 HOH B 35 435 136 HOH HOH . G 4 HOH B 36 436 56 HOH HOH . G 4 HOH B 37 437 52 HOH HOH . G 4 HOH B 38 438 109 HOH HOH . G 4 HOH B 39 439 170 HOH HOH . G 4 HOH B 40 440 164 HOH HOH . G 4 HOH B 41 441 49 HOH HOH . G 4 HOH B 42 442 135 HOH HOH . G 4 HOH B 43 443 81 HOH HOH . G 4 HOH B 44 444 189 HOH HOH . G 4 HOH B 45 445 65 HOH HOH . G 4 HOH B 46 446 178 HOH HOH . G 4 HOH B 47 447 188 HOH HOH . G 4 HOH B 48 448 134 HOH HOH . G 4 HOH B 49 449 162 HOH HOH . G 4 HOH B 50 450 179 HOH HOH . G 4 HOH B 51 451 58 HOH HOH . G 4 HOH B 52 452 184 HOH HOH . G 4 HOH B 53 453 183 HOH HOH . H 4 HOH C 1 201 89 HOH HOH . H 4 HOH C 2 202 120 HOH HOH . H 4 HOH C 3 203 98 HOH HOH . H 4 HOH C 4 204 107 HOH HOH . H 4 HOH C 5 205 19 HOH HOH . H 4 HOH C 6 206 38 HOH HOH . H 4 HOH C 7 207 195 HOH HOH . H 4 HOH C 8 208 66 HOH HOH . H 4 HOH C 9 209 99 HOH HOH . H 4 HOH C 10 210 74 HOH HOH . H 4 HOH C 11 211 76 HOH HOH . H 4 HOH C 12 212 87 HOH HOH . H 4 HOH C 13 213 18 HOH HOH . H 4 HOH C 14 214 137 HOH HOH . H 4 HOH C 15 215 151 HOH HOH . H 4 HOH C 16 216 53 HOH HOH . H 4 HOH C 17 217 32 HOH HOH . H 4 HOH C 18 218 126 HOH HOH . H 4 HOH C 19 219 97 HOH HOH . H 4 HOH C 20 220 116 HOH HOH . H 4 HOH C 21 221 158 HOH HOH . H 4 HOH C 22 222 165 HOH HOH . H 4 HOH C 23 223 112 HOH HOH . H 4 HOH C 24 224 127 HOH HOH . H 4 HOH C 25 225 147 HOH HOH . H 4 HOH C 26 226 13 HOH HOH . H 4 HOH C 27 227 152 HOH HOH . H 4 HOH C 28 228 68 HOH HOH . H 4 HOH C 29 229 141 HOH HOH . H 4 HOH C 30 230 149 HOH HOH . H 4 HOH C 31 231 174 HOH HOH . H 4 HOH C 32 232 167 HOH HOH . H 4 HOH C 33 233 205 HOH HOH . H 4 HOH C 34 234 160 HOH HOH . H 4 HOH C 35 235 130 HOH HOH . H 4 HOH C 36 236 206 HOH HOH . H 4 HOH C 37 237 166 HOH HOH . H 4 HOH C 38 238 194 HOH HOH . H 4 HOH C 39 239 22 HOH HOH . H 4 HOH C 40 240 129 HOH HOH . I 4 HOH A 1 601 14 HOH HOH . I 4 HOH A 2 602 92 HOH HOH . I 4 HOH A 3 603 46 HOH HOH . I 4 HOH A 4 604 8 HOH HOH . I 4 HOH A 5 605 79 HOH HOH . I 4 HOH A 6 606 78 HOH HOH . I 4 HOH A 7 607 3 HOH HOH . I 4 HOH A 8 608 28 HOH HOH . I 4 HOH A 9 609 21 HOH HOH . I 4 HOH A 10 610 115 HOH HOH . I 4 HOH A 11 611 34 HOH HOH . I 4 HOH A 12 612 10 HOH HOH . I 4 HOH A 13 613 39 HOH HOH . I 4 HOH A 14 614 191 HOH HOH . I 4 HOH A 15 615 75 HOH HOH . I 4 HOH A 16 616 204 HOH HOH . I 4 HOH A 17 617 140 HOH HOH . I 4 HOH A 18 618 102 HOH HOH . I 4 HOH A 19 619 25 HOH HOH . I 4 HOH A 20 620 7 HOH HOH . I 4 HOH A 21 621 51 HOH HOH . I 4 HOH A 22 622 64 HOH HOH . I 4 HOH A 23 623 70 HOH HOH . I 4 HOH A 24 624 154 HOH HOH . I 4 HOH A 25 625 61 HOH HOH . I 4 HOH A 26 626 91 HOH HOH . I 4 HOH A 27 627 175 HOH HOH . I 4 HOH A 28 628 50 HOH HOH . I 4 HOH A 29 629 45 HOH HOH . I 4 HOH A 30 630 63 HOH HOH . I 4 HOH A 31 631 54 HOH HOH . I 4 HOH A 32 632 55 HOH HOH . I 4 HOH A 33 633 5 HOH HOH . I 4 HOH A 34 634 105 HOH HOH . I 4 HOH A 35 635 73 HOH HOH . I 4 HOH A 36 636 169 HOH HOH . I 4 HOH A 37 637 203 HOH HOH . I 4 HOH A 38 638 173 HOH HOH . I 4 HOH A 39 639 95 HOH HOH . I 4 HOH A 40 640 186 HOH HOH . I 4 HOH A 41 641 43 HOH HOH . I 4 HOH A 42 642 199 HOH HOH . I 4 HOH A 43 643 185 HOH HOH . I 4 HOH A 44 644 42 HOH HOH . I 4 HOH A 45 645 122 HOH HOH . I 4 HOH A 46 646 155 HOH HOH . I 4 HOH A 47 647 84 HOH HOH . I 4 HOH A 48 648 47 HOH HOH . I 4 HOH A 49 649 11 HOH HOH . I 4 HOH A 50 650 111 HOH HOH . I 4 HOH A 51 651 181 HOH HOH . I 4 HOH A 52 652 36 HOH HOH . I 4 HOH A 53 653 190 HOH HOH . I 4 HOH A 54 654 144 HOH HOH . I 4 HOH A 55 655 20 HOH HOH . I 4 HOH A 56 656 101 HOH HOH . I 4 HOH A 57 657 77 HOH HOH . I 4 HOH A 58 658 171 HOH HOH . I 4 HOH A 59 659 142 HOH HOH . I 4 HOH A 60 660 180 HOH HOH . I 4 HOH A 61 661 143 HOH HOH . I 4 HOH A 62 662 59 HOH HOH . I 4 HOH A 63 663 172 HOH HOH . I 4 HOH A 64 664 117 HOH HOH . I 4 HOH A 65 665 202 HOH HOH . I 4 HOH A 66 666 145 HOH HOH . I 4 HOH A 67 667 187 HOH HOH . I 4 HOH A 68 668 132 HOH HOH . I 4 HOH A 69 669 177 HOH HOH . I 4 HOH A 70 670 138 HOH HOH . I 4 HOH A 71 671 114 HOH HOH . I 4 HOH A 72 672 110 HOH HOH . I 4 HOH A 73 673 82 HOH HOH . I 4 HOH A 74 674 192 HOH HOH . J 4 HOH D 1 101 106 HOH HOH . J 4 HOH D 2 102 48 HOH HOH . J 4 HOH D 3 103 94 HOH HOH . J 4 HOH D 4 104 2 HOH HOH . J 4 HOH D 5 105 26 HOH HOH . J 4 HOH D 6 106 108 HOH HOH . J 4 HOH D 7 107 118 HOH HOH . J 4 HOH D 8 108 41 HOH HOH . J 4 HOH D 9 109 200 HOH HOH . J 4 HOH D 10 110 44 HOH HOH . J 4 HOH D 11 111 121 HOH HOH . J 4 HOH D 12 112 201 HOH HOH . J 4 HOH D 13 113 139 HOH HOH . J 4 HOH D 14 114 128 HOH HOH . J 4 HOH D 15 115 197 HOH HOH . J 4 HOH D 16 116 193 HOH HOH . J 4 HOH D 17 117 163 HOH HOH . J 4 HOH D 18 118 156 HOH HOH . J 4 HOH D 19 119 198 HOH HOH . J 4 HOH D 20 120 168 HOH HOH . J 4 HOH D 21 121 196 HOH HOH . J 4 HOH D 22 122 146 HOH HOH . J 4 HOH D 23 123 103 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 13.25 -7.017 -15.268 1 52.55 ? C1 GOL 101 C 1 HETATM 2 O O1 GOL . . . E 3 12.7 -5.876 -15.847 1 53.12 ? O1 GOL 101 C 1 HETATM 3 C C2 GOL . . . E 3 12.5 -8.252 -15.85 1 53.73 ? C2 GOL 101 C 1 HETATM 4 O O2 GOL . . . E 3 11.138 -8.205 -15.599 1 53.01 ? O2 GOL 101 C 1 HETATM 5 C C3 GOL . . . E 3 12.828 -8.272 -17.371 1 49.22 ? C3 GOL 101 C 1 HETATM 6 O O3 GOL . . . E 3 11.875 -7.483 -18.01 1 52.92 ? O3 GOL 101 C 1 # _model_server_stats.io_time_ms 110 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #