data_8SSP
#
_model_server_result.job_id            dNGYdn7Ssd84oFkbR8MJOA 
_model_server_result.datetime_utc      '2024-11-24 09:47:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ssp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":505}' 
#
_entry.id    8SSP 
#
_exptl.entry_id    8SSP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8SSP 
_cell.length_a            75.517 
_cell.length_b            90.805 
_cell.length_c            143.13 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SSP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    'I 2 2' 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 F N N 
? 3 G N N 
? 3 J N N 
? 3 K N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 152 n n 
C1 C2 EDO sing 153 n n 
C1 H11 EDO sing 154 n n 
C1 H12 EDO sing 155 n n 
O1 HO1 EDO sing 156 n n 
C2 O2 EDO sing 157 n n 
C2 H21 EDO sing 158 n n 
C2 H22 EDO sing 159 n n 
O2 HO2 EDO sing 160 n n 
#
_atom_sites.entry_id                     8SSP 
_atom_sites.fract_transf_matrix[1][1]    0.013242 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011013 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006987 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EDO A 1 501 405 EDO EDO . 
D 4 SO4 A 1 502 408 SO4 SO4 . 
E 5 MES A 1 503 409 MES MES . 
F 3 EDO A 1 504 410 EDO EDO . 
G 3 EDO A 1 505 414 EDO EDO . 
H 6 PO4 A 1 506 415 PO4 PO4 . 
I 7 PDO A 1 507 416 PDO PDO . 
J 3 EDO A 1 508 417 EDO EDO . 
K 3 EDO A 1 509 418 EDO EDO . 
L 8 627 A 1 510 1 627 627 . 
M 4 SO4 A 1 511 3 SO4 SO4 . 
N 9 HOH A 1 601 14 HOH HOH . 
N 9 HOH A 2 602 92 HOH HOH . 
N 9 HOH A 3 603 39 HOH HOH . 
N 9 HOH A 4 604 9 HOH HOH . 
N 9 HOH A 5 605 123 HOH HOH . 
N 9 HOH A 6 606 18 HOH HOH . 
N 9 HOH A 7 607 13 HOH HOH . 
N 9 HOH A 8 608 37 HOH HOH . 
N 9 HOH A 9 609 41 HOH HOH . 
N 9 HOH A 10 610 65 HOH HOH . 
N 9 HOH A 11 611 103 HOH HOH . 
N 9 HOH A 12 612 32 HOH HOH . 
N 9 HOH A 13 613 51 HOH HOH . 
N 9 HOH A 14 614 76 HOH HOH . 
N 9 HOH A 15 615 7 HOH HOH . 
N 9 HOH A 16 616 50 HOH HOH . 
N 9 HOH A 17 617 40 HOH HOH . 
N 9 HOH A 18 618 87 HOH HOH . 
N 9 HOH A 19 619 47 HOH HOH . 
N 9 HOH A 20 620 1 HOH HOH . 
N 9 HOH A 21 621 23 HOH HOH . 
N 9 HOH A 22 622 24 HOH HOH . 
N 9 HOH A 23 623 2 HOH HOH . 
N 9 HOH A 24 624 66 HOH HOH . 
N 9 HOH A 25 625 44 HOH HOH . 
N 9 HOH A 26 626 26 HOH HOH . 
N 9 HOH A 27 627 64 HOH HOH . 
N 9 HOH A 28 628 4 HOH HOH . 
N 9 HOH A 29 629 68 HOH HOH . 
N 9 HOH A 30 630 59 HOH HOH . 
N 9 HOH A 31 631 42 HOH HOH . 
N 9 HOH A 32 632 52 HOH HOH . 
N 9 HOH A 33 633 62 HOH HOH . 
N 9 HOH A 34 634 122 HOH HOH . 
N 9 HOH A 35 635 5 HOH HOH . 
N 9 HOH A 36 636 6 HOH HOH . 
N 9 HOH A 37 637 12 HOH HOH . 
N 9 HOH A 38 638 70 HOH HOH . 
N 9 HOH A 39 639 8 HOH HOH . 
N 9 HOH A 40 640 11 HOH HOH . 
N 9 HOH A 41 641 48 HOH HOH . 
N 9 HOH A 42 642 21 HOH HOH . 
N 9 HOH A 43 643 30 HOH HOH . 
N 9 HOH A 44 644 15 HOH HOH . 
N 9 HOH A 45 645 38 HOH HOH . 
N 9 HOH A 46 646 19 HOH HOH . 
N 9 HOH A 47 647 17 HOH HOH . 
N 9 HOH A 48 648 33 HOH HOH . 
N 9 HOH A 49 649 60 HOH HOH . 
N 9 HOH A 50 650 25 HOH HOH . 
N 9 HOH A 51 651 108 HOH HOH . 
N 9 HOH A 52 652 117 HOH HOH . 
N 9 HOH A 53 653 80 HOH HOH . 
N 9 HOH A 54 654 85 HOH HOH . 
N 9 HOH A 55 655 120 HOH HOH . 
N 9 HOH A 56 656 112 HOH HOH . 
N 9 HOH A 57 657 16 HOH HOH . 
N 9 HOH A 58 658 93 HOH HOH . 
N 9 HOH A 59 659 69 HOH HOH . 
N 9 HOH A 60 660 101 HOH HOH . 
N 9 HOH A 61 661 49 HOH HOH . 
N 9 HOH A 62 662 113 HOH HOH . 
N 9 HOH A 63 663 10 HOH HOH . 
N 9 HOH A 64 664 104 HOH HOH . 
N 9 HOH A 65 665 94 HOH HOH . 
N 9 HOH A 66 666 119 HOH HOH . 
N 9 HOH A 67 667 109 HOH HOH . 
N 9 HOH A 68 668 54 HOH HOH . 
N 9 HOH A 69 669 95 HOH HOH . 
N 9 HOH A 70 670 56 HOH HOH . 
N 9 HOH A 71 671 96 HOH HOH . 
N 9 HOH A 72 672 53 HOH HOH . 
N 9 HOH A 73 673 61 HOH HOH . 
N 9 HOH A 74 674 121 HOH HOH . 
N 9 HOH A 75 675 43 HOH HOH . 
N 9 HOH A 76 676 89 HOH HOH . 
N 9 HOH A 77 677 84 HOH HOH . 
N 9 HOH A 78 678 63 HOH HOH . 
N 9 HOH A 79 679 78 HOH HOH . 
N 9 HOH A 80 680 118 HOH HOH . 
N 9 HOH A 81 681 102 HOH HOH . 
N 9 HOH A 82 682 111 HOH HOH . 
N 9 HOH A 83 683 57 HOH HOH . 
N 9 HOH A 84 684 82 HOH HOH . 
N 9 HOH A 85 685 58 HOH HOH . 
N 9 HOH A 86 686 77 HOH HOH . 
N 9 HOH A 87 687 116 HOH HOH . 
N 9 HOH A 88 688 86 HOH HOH . 
N 9 HOH A 89 689 46 HOH HOH . 
N 9 HOH A 90 690 90 HOH HOH . 
N 9 HOH A 91 691 79 HOH HOH . 
N 9 HOH A 92 692 106 HOH HOH . 
N 9 HOH A 93 693 100 HOH HOH . 
N 9 HOH A 94 694 99 HOH HOH . 
N 9 HOH A 95 695 97 HOH HOH . 
N 9 HOH A 96 696 83 HOH HOH . 
N 9 HOH A 97 697 105 HOH HOH . 
N 9 HOH A 98 698 110 HOH HOH . 
N 9 HOH A 99 699 98 HOH HOH . 
N 9 HOH A 100 700 73 HOH HOH . 
N 9 HOH A 101 701 91 HOH HOH . 
O 9 HOH B 1 101 31 HOH HOH . 
O 9 HOH B 2 102 28 HOH HOH . 
O 9 HOH B 3 103 20 HOH HOH . 
O 9 HOH B 4 104 34 HOH HOH . 
O 9 HOH B 5 105 72 HOH HOH . 
O 9 HOH B 6 106 67 HOH HOH . 
O 9 HOH B 7 107 35 HOH HOH . 
O 9 HOH B 8 108 115 HOH HOH . 
O 9 HOH B 9 109 114 HOH HOH . 
O 9 HOH B 10 110 71 HOH HOH . 
O 9 HOH B 11 111 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . G 3 -16.152 -52.762 -25.498 1 54.3 ? C1 EDO 505 A 1 
HETATM 2 O O1 EDO . . . G 3 -15.459 -52.337 -24.319 1 60.11 ? O1 EDO 505 A 1 
HETATM 3 C C2 EDO . . . G 3 -15.226 -53.624 -26.349 1 62.23 ? C2 EDO 505 A 1 
HETATM 4 O O2 EDO . . . G 3 -15.917 -54.049 -27.53 1 66.98 ? O2 EDO 505 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           341 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#