data_8SSP # _model_server_result.job_id 98at41WxRX34S26wxRW46A _model_server_result.datetime_utc '2024-11-13 05:42:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ssp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":507}' # _entry.id 8SSP # _exptl.entry_id 8SSP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 76.094 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,3-PROPANDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SSP _cell.length_a 75.517 _cell.length_b 90.805 _cell.length_c 143.13 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SSP _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O2' _chem_comp.formula_weight 76.094 _chem_comp.id PDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,3-PROPANDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PDO sing 340 n n C1 C2 PDO sing 341 n n C1 H11 PDO sing 342 n n C1 H12 PDO sing 343 n n O1 HO1 PDO sing 344 n n C2 C3 PDO sing 345 n n C2 H21 PDO sing 346 n n C2 H22 PDO sing 347 n n C3 O3 PDO sing 348 n n C3 H31 PDO sing 349 n n C3 H32 PDO sing 350 n n O3 HO3 PDO sing 351 n n # _atom_sites.entry_id 8SSP _atom_sites.fract_transf_matrix[1][1] 0.013242 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011013 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006987 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 501 405 EDO EDO . D 4 SO4 A 1 502 408 SO4 SO4 . E 5 MES A 1 503 409 MES MES . F 3 EDO A 1 504 410 EDO EDO . G 3 EDO A 1 505 414 EDO EDO . H 6 PO4 A 1 506 415 PO4 PO4 . I 7 PDO A 1 507 416 PDO PDO . J 3 EDO A 1 508 417 EDO EDO . K 3 EDO A 1 509 418 EDO EDO . L 8 627 A 1 510 1 627 627 . M 4 SO4 A 1 511 3 SO4 SO4 . N 9 HOH A 1 601 14 HOH HOH . N 9 HOH A 2 602 92 HOH HOH . N 9 HOH A 3 603 39 HOH HOH . N 9 HOH A 4 604 9 HOH HOH . N 9 HOH A 5 605 123 HOH HOH . N 9 HOH A 6 606 18 HOH HOH . N 9 HOH A 7 607 13 HOH HOH . N 9 HOH A 8 608 37 HOH HOH . N 9 HOH A 9 609 41 HOH HOH . N 9 HOH A 10 610 65 HOH HOH . N 9 HOH A 11 611 103 HOH HOH . N 9 HOH A 12 612 32 HOH HOH . N 9 HOH A 13 613 51 HOH HOH . N 9 HOH A 14 614 76 HOH HOH . N 9 HOH A 15 615 7 HOH HOH . N 9 HOH A 16 616 50 HOH HOH . N 9 HOH A 17 617 40 HOH HOH . N 9 HOH A 18 618 87 HOH HOH . N 9 HOH A 19 619 47 HOH HOH . N 9 HOH A 20 620 1 HOH HOH . N 9 HOH A 21 621 23 HOH HOH . N 9 HOH A 22 622 24 HOH HOH . N 9 HOH A 23 623 2 HOH HOH . N 9 HOH A 24 624 66 HOH HOH . N 9 HOH A 25 625 44 HOH HOH . N 9 HOH A 26 626 26 HOH HOH . N 9 HOH A 27 627 64 HOH HOH . N 9 HOH A 28 628 4 HOH HOH . N 9 HOH A 29 629 68 HOH HOH . N 9 HOH A 30 630 59 HOH HOH . N 9 HOH A 31 631 42 HOH HOH . N 9 HOH A 32 632 52 HOH HOH . N 9 HOH A 33 633 62 HOH HOH . N 9 HOH A 34 634 122 HOH HOH . N 9 HOH A 35 635 5 HOH HOH . N 9 HOH A 36 636 6 HOH HOH . N 9 HOH A 37 637 12 HOH HOH . N 9 HOH A 38 638 70 HOH HOH . N 9 HOH A 39 639 8 HOH HOH . N 9 HOH A 40 640 11 HOH HOH . N 9 HOH A 41 641 48 HOH HOH . N 9 HOH A 42 642 21 HOH HOH . N 9 HOH A 43 643 30 HOH HOH . N 9 HOH A 44 644 15 HOH HOH . N 9 HOH A 45 645 38 HOH HOH . N 9 HOH A 46 646 19 HOH HOH . N 9 HOH A 47 647 17 HOH HOH . N 9 HOH A 48 648 33 HOH HOH . N 9 HOH A 49 649 60 HOH HOH . N 9 HOH A 50 650 25 HOH HOH . N 9 HOH A 51 651 108 HOH HOH . N 9 HOH A 52 652 117 HOH HOH . N 9 HOH A 53 653 80 HOH HOH . N 9 HOH A 54 654 85 HOH HOH . N 9 HOH A 55 655 120 HOH HOH . N 9 HOH A 56 656 112 HOH HOH . N 9 HOH A 57 657 16 HOH HOH . N 9 HOH A 58 658 93 HOH HOH . N 9 HOH A 59 659 69 HOH HOH . N 9 HOH A 60 660 101 HOH HOH . N 9 HOH A 61 661 49 HOH HOH . N 9 HOH A 62 662 113 HOH HOH . N 9 HOH A 63 663 10 HOH HOH . N 9 HOH A 64 664 104 HOH HOH . N 9 HOH A 65 665 94 HOH HOH . N 9 HOH A 66 666 119 HOH HOH . N 9 HOH A 67 667 109 HOH HOH . N 9 HOH A 68 668 54 HOH HOH . N 9 HOH A 69 669 95 HOH HOH . N 9 HOH A 70 670 56 HOH HOH . N 9 HOH A 71 671 96 HOH HOH . N 9 HOH A 72 672 53 HOH HOH . N 9 HOH A 73 673 61 HOH HOH . N 9 HOH A 74 674 121 HOH HOH . N 9 HOH A 75 675 43 HOH HOH . N 9 HOH A 76 676 89 HOH HOH . N 9 HOH A 77 677 84 HOH HOH . N 9 HOH A 78 678 63 HOH HOH . N 9 HOH A 79 679 78 HOH HOH . N 9 HOH A 80 680 118 HOH HOH . N 9 HOH A 81 681 102 HOH HOH . N 9 HOH A 82 682 111 HOH HOH . N 9 HOH A 83 683 57 HOH HOH . N 9 HOH A 84 684 82 HOH HOH . N 9 HOH A 85 685 58 HOH HOH . N 9 HOH A 86 686 77 HOH HOH . N 9 HOH A 87 687 116 HOH HOH . N 9 HOH A 88 688 86 HOH HOH . N 9 HOH A 89 689 46 HOH HOH . N 9 HOH A 90 690 90 HOH HOH . N 9 HOH A 91 691 79 HOH HOH . N 9 HOH A 92 692 106 HOH HOH . N 9 HOH A 93 693 100 HOH HOH . N 9 HOH A 94 694 99 HOH HOH . N 9 HOH A 95 695 97 HOH HOH . N 9 HOH A 96 696 83 HOH HOH . N 9 HOH A 97 697 105 HOH HOH . N 9 HOH A 98 698 110 HOH HOH . N 9 HOH A 99 699 98 HOH HOH . N 9 HOH A 100 700 73 HOH HOH . N 9 HOH A 101 701 91 HOH HOH . O 9 HOH B 1 101 31 HOH HOH . O 9 HOH B 2 102 28 HOH HOH . O 9 HOH B 3 103 20 HOH HOH . O 9 HOH B 4 104 34 HOH HOH . O 9 HOH B 5 105 72 HOH HOH . O 9 HOH B 6 106 67 HOH HOH . O 9 HOH B 7 107 35 HOH HOH . O 9 HOH B 8 108 115 HOH HOH . O 9 HOH B 9 109 114 HOH HOH . O 9 HOH B 10 110 71 HOH HOH . O 9 HOH B 11 111 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PDO . . . I 7 -4.018 -36.883 -21.6 1 36.35 ? C1 PDO 507 A 1 HETATM 2 O O1 PDO . . . I 7 -2.802 -37.137 -22.269 1 48.21 ? O1 PDO 507 A 1 HETATM 3 C C2 PDO . . . I 7 -5.016 -37.96 -21.981 1 35.27 ? C2 PDO 507 A 1 HETATM 4 C C3 PDO . . . I 7 -6.277 -37.856 -21.145 1 48.06 ? C3 PDO 507 A 1 HETATM 5 O O3 PDO . . . I 7 -7.235 -38.765 -21.643 1 54.86 ? O3 PDO 507 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #