data_8ST2 # _model_server_result.job_id nolXRENXEiVJHnVA2AFyNg _model_server_result.datetime_utc '2024-10-18 05:24:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8st2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":704}' # _entry.id 8ST2 # _exptl.entry_id 8ST2 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 146.207 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ACETYLCHOLINE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ST2 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ST2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details nonameric _pdbx_struct_assembly.oligomeric_count 9 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 O N N ? 7 S N N ? 7 W N N # _pdbx_entity_branch.entity_id 5 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 5 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 5 3 2 BMA NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 5 n J NAG 1 H 1 NAG C 701 NAG 5 n J NAG 2 H 2 NAG C 702 NAG 5 n J BMA 3 H 3 BMA C 703 BMA 5 n K NAG 1 I 1 NAG E 701 NAG 5 n K NAG 2 I 2 NAG E 702 NAG 5 n K BMA 3 I 3 BMA E 703 BMA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 135 A CYS 135 1_555 A SG CYS 149 A CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 199 A CYS 199 1_555 A SG CYS 200 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 B SG CYS 135 B CYS 135 1_555 B SG CYS 149 B CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf4 B SG CYS 199 B CYS 199 1_555 B SG CYS 200 B CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf5 C SG CYS 130 C CYS 130 1_555 C SG CYS 144 C CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf6 D SG CYS 135 D CYS 135 1_555 D SG CYS 149 D CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf7 D SG CYS 199 D CYS 199 1_555 D SG CYS 200 D CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf8 E SG CYS 130 E CYS 130 1_555 E SG CYS 144 E CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf9 F SG CYS 42 F CYS 23 1_555 F SG CYS 112 F CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf10 F SG CYS 158 F CYS 139 1_555 F SG CYS 218 F CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf11 G SG CYS 41 G CYS 23 1_555 G SG CYS 115 G CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf12 G SG CYS 165 G CYS 147 1_555 G SG CYS 220 G CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf13 H SG CYS 42 J CYS 23 1_555 H SG CYS 112 J CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf14 H SG CYS 158 J CYS 139 1_555 H SG CYS 218 J CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf15 I SG CYS 41 K CYS 23 1_555 I SG CYS 115 K CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf16 I SG CYS 165 K CYS 147 1_555 I SG CYS 220 K CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A ND2 ASN 31 A ASN 31 1_555 L C1 NAG . A NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 A ND2 ASN 81 A ASN 81 1_555 M C1 NAG . A NAG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale3 A ND2 ASN 148 A ASN 148 1_555 N C1 NAG . A NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale4 B ND2 ASN 31 B ASN 31 1_555 P C1 NAG . B NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale5 B ND2 ASN 81 B ASN 81 1_555 Q C1 NAG . B NAG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale6 B ND2 ASN 148 B ASN 148 1_555 R C1 NAG . B NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale7 C ND2 ASN 143 C ASN 143 1_555 J C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale8 D ND2 ASN 31 D ASN 31 1_555 T C1 NAG . D NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale9 D ND2 ASN 81 D ASN 81 1_555 U C1 NAG . D NAG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale10 D ND2 ASN 148 D ASN 148 1_555 V C1 NAG . D NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale11 E ND2 ASN 143 E ASN 143 1_555 K C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale12 J O4 NAG . H NAG 1 1_555 J C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale13 J O4 NAG . H NAG 2 1_555 J C1 BMA . H BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale14 K O4 NAG . I NAG 1 1_555 K C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale15 K O4 NAG . I NAG 2 1_555 K C1 BMA . I BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? # _chem_comp.formula 'C7 H16 N O2 1' _chem_comp.formula_weight 146.207 _chem_comp.id ACH _chem_comp.mon_nstd_flag . _chem_comp.name ACETYLCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 ACH sing 1 n n N1 C8 ACH sing 2 n n N1 C9 ACH sing 3 n n N1 C10 ACH sing 4 n n C2 C3 ACH sing 5 n n C2 H21 ACH sing 6 n n C2 H22 ACH sing 7 n n C3 O4 ACH sing 8 n n C3 H31 ACH sing 9 n n C3 H32 ACH sing 10 n n O4 C5 ACH sing 11 n n C5 O7 ACH doub 12 n n C5 C6 ACH sing 13 n n C6 H61 ACH sing 14 n n C6 H62 ACH sing 15 n n C6 H63 ACH sing 16 n n C8 H81 ACH sing 17 n n C8 H82 ACH sing 18 n n C8 H83 ACH sing 19 n n C9 H91 ACH sing 20 n n C9 H92 ACH sing 21 n n C9 H93 ACH sing 22 n n C10 H101 ACH sing 23 n n C10 H102 ACH sing 24 n n C10 H103 ACH sing 25 n n # _atom_sites.entry_id 8ST2 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code L 6 NAG A 1 701 701 NAG NAG . M 6 NAG A 1 702 702 NAG NAG . N 6 NAG A 1 703 704 NAG NAG . O 7 ACH A 1 704 803 ACH ACH . P 6 NAG B 1 701 701 NAG NAG . Q 6 NAG B 1 702 702 NAG NAG . R 6 NAG B 1 703 704 NAG NAG . S 7 ACH B 1 704 803 ACH ACH . T 6 NAG D 1 701 701 NAG NAG . U 6 NAG D 1 702 702 NAG NAG . V 6 NAG D 1 703 704 NAG NAG . W 7 ACH D 1 704 803 ACH ACH . X 8 NA E 1 501 707 NA NA . Y 9 HOH A 1 801 801 HOH HOH . Y 9 HOH A 2 802 801 HOH HOH . Z 9 HOH B 1 801 802 HOH HOH . Z 9 HOH B 2 802 802 HOH HOH . AA 9 HOH C 1 801 801 HOH HOH . AA 9 HOH C 2 802 801 HOH HOH . BA 9 HOH D 1 801 801 HOH HOH . CA 9 HOH E 1 601 802 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 ACH . . . W 7 191.601 165.643 192.468 1 26.44 ? N1 ACH 704 D 1 HETATM 2 C C2 ACH . . . W 7 190.357 165.755 193.316 1 34.7 ? C2 ACH 704 D 1 HETATM 3 C C3 ACH . . . W 7 190.282 164.853 194.525 1 40.33 ? C3 ACH 704 D 1 HETATM 4 O O4 ACH . . . W 7 191.256 165.223 195.535 1 33.79 ? O4 ACH 704 D 1 HETATM 5 C C5 ACH . . . W 7 191.12 164.63 196.722 1 36.2 ? C5 ACH 704 D 1 HETATM 6 O O7 ACH . . . W 7 190.252 163.844 196.953 1 37.93 ? O7 ACH 704 D 1 HETATM 7 C C6 ACH . . . W 7 192.17 165.07 197.681 1 38.35 ? C6 ACH 704 D 1 HETATM 8 C C8 ACH . . . W 7 191.559 166.712 191.426 1 39.49 ? C8 ACH 704 D 1 HETATM 9 C C9 ACH . . . W 7 192.82 165.837 193.308 1 35.75 ? C9 ACH 704 D 1 HETATM 10 C C10 ACH . . . W 7 191.689 164.316 191.786 1 35.65 ? C10 ACH 704 D 1 HETATM 11 H H21 ACH . . . W 7 189.607 165.561 192.718 1 40.19 ? H21 ACH 704 D 1 HETATM 12 H H22 ACH . . . W 7 190.306 166.691 193.597 1 41.17 ? H22 ACH 704 D 1 HETATM 13 H H31 ACH . . . W 7 189.381 164.867 194.909 1 41.2 ? H31 ACH 704 D 1 HETATM 14 H H32 ACH . . . W 7 190.476 163.936 194.248 1 42.02 ? H32 ACH 704 D 1 HETATM 15 H H61 ACH . . . W 7 192.704 164.295 197.952 1 41.42 ? H61 ACH 704 D 1 HETATM 16 H H62 ACH . . . W 7 191.752 165.458 198.477 1 41.36 ? H62 ACH 704 D 1 HETATM 17 H H63 ACH . . . W 7 192.762 165.718 197.249 1 40.62 ? H63 ACH 704 D 1 HETATM 18 H H81 ACH . . . W 7 190.712 166.632 190.942 1 41.13 ? H81 ACH 704 D 1 HETATM 19 H H82 ACH . . . W 7 192.314 166.579 190.817 1 41.59 ? H82 ACH 704 D 1 HETATM 20 H H83 ACH . . . W 7 191.632 167.587 191.859 1 41.66 ? H83 ACH 704 D 1 HETATM 21 H H91 ACH . . . W 7 193.005 165.002 193.784 1 40.57 ? H91 ACH 704 D 1 HETATM 22 H H92 ACH . . . W 7 192.648 166.561 193.944 1 40.67 ? H92 ACH 704 D 1 HETATM 23 H H93 ACH . . . W 7 193.567 166.071 192.72 1 39.73 ? H93 ACH 704 D 1 HETATM 24 H H101 ACH . . . W 7 191.278 164.386 190.9 1 40.69 ? H101 ACH 704 D 1 HETATM 25 H H102 ACH . . . W 7 191.203 163.648 192.309 1 41.29 ? H102 ACH 704 D 1 HETATM 26 H H103 ACH . . . W 7 192.633 164.067 191.717 1 39.79 ? H103 ACH 704 D 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #