data_8STG # _model_server_result.job_id 3t5Fbce-R419grt9gy1Jig _model_server_result.datetime_utc '2025-01-23 04:55:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8stg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 8STG # _exptl.entry_id 8STG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 511.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{4-[(5P)-4-amino-5-{3-fluoro-4-[(4-methylpyrimidin-2-yl)oxy]phenyl}-7-methyl-7H-pyrrolo[2,3-d]pyrimidin-6-yl]phenyl}-2-methylpropanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8STG _cell.length_a 62.51 _cell.length_b 91.34 _cell.length_c 129.62 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8STG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 39 A CYS 491 1_555 C C38 WCJ . A WCJ 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? covale ? covale2 B SG CYS 39 B CYS 491 1_555 D C38 WCJ . B WCJ 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.881 ? # _chem_comp.formula 'C28 H26 F N7 O2' _chem_comp.formula_weight 511.55 _chem_comp.id WCJ _chem_comp.mon_nstd_flag . _chem_comp.name N-{4-[(5P)-4-amino-5-{3-fluoro-4-[(4-methylpyrimidin-2-yl)oxy]phenyl}-7-methyl-7H-pyrrolo[2,3-d]pyrimidin-6-yl]phenyl}-2-methylpropanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 WCJ sing 374 n n C38 C02 WCJ sing 375 n n C02 C03 WCJ sing 376 n n C03 O37 WCJ doub 377 n n C03 N04 WCJ sing 378 n n N04 C05 WCJ sing 379 n n C05 C06 WCJ doub 380 n y C05 C36 WCJ sing 381 n y C06 C07 WCJ sing 382 n y C36 C35 WCJ doub 383 n y C07 C08 WCJ doub 384 n y C35 C08 WCJ sing 385 n y C20 C19 WCJ sing 386 n n C08 C09 WCJ sing 387 n n F14 C13 WCJ sing 388 n n N18 C19 WCJ doub 389 n y N18 C17 WCJ sing 390 n y O16 C17 WCJ sing 391 n n O16 C15 WCJ sing 392 n n C19 C21 WCJ sing 393 n y C13 C15 WCJ doub 394 n y C13 C12 WCJ sing 395 n y C17 N23 WCJ doub 396 n y C15 C24 WCJ sing 397 n y C12 C11 WCJ doub 398 n y C09 N26 WCJ sing 399 n y C09 C10 WCJ doub 400 n y C27 N26 WCJ sing 401 n n C24 C25 WCJ doub 402 n y C21 C22 WCJ doub 403 n y C11 C25 WCJ sing 404 n y C11 C10 WCJ sing 405 n n N26 C28 WCJ sing 406 n y N23 C22 WCJ sing 407 n y C10 C29 WCJ sing 408 n y C28 C29 WCJ doub 409 n y C28 N34 WCJ sing 410 n y C29 C30 WCJ sing 411 n y N34 C33 WCJ doub 412 n y C30 N31 WCJ sing 413 n n C30 N32 WCJ doub 414 n y C33 N32 WCJ sing 415 n y C20 H203 WCJ sing 416 n n C20 H201 WCJ sing 417 n n C20 H202 WCJ sing 418 n n C21 H211 WCJ sing 419 n n C22 H221 WCJ sing 420 n n C24 H241 WCJ sing 421 n n C01 H011 WCJ sing 422 n n C01 H013 WCJ sing 423 n n C01 H012 WCJ sing 424 n n C02 H021 WCJ sing 425 n n C06 H061 WCJ sing 426 n n C07 H071 WCJ sing 427 n n C12 H121 WCJ sing 428 n n C25 H251 WCJ sing 429 n n C27 H273 WCJ sing 430 n n C27 H271 WCJ sing 431 n n C27 H272 WCJ sing 432 n n C33 H331 WCJ sing 433 n n C35 H351 WCJ sing 434 n n C36 H361 WCJ sing 435 n n C38 H381 WCJ sing 436 n n C38 H382 WCJ sing 437 n n C38 H1 WCJ sing 438 n n N04 H041 WCJ sing 439 n n N31 H312 WCJ sing 440 n n N31 H311 WCJ sing 441 n n # _atom_sites.entry_id 8STG _atom_sites.fract_transf_matrix[1][1] 0.015997 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010948 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007715 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 WCJ A 1 801 1 WCJ LIG . D 2 WCJ B 1 801 2 WCJ LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 WCJ . . . C 2 -27.458 26.429 27.557 1 118.61 ? C10 WCJ 801 A 1 HETATM 2 C C13 WCJ . . . C 2 -28.069 22.911 26.24 1 116.18 ? C13 WCJ 801 A 1 HETATM 3 C C15 WCJ . . . C 2 -29.455 22.696 26.493 1 113.89 ? C15 WCJ 801 A 1 HETATM 4 C C17 WCJ . . . C 2 -29.533 20.267 26.49 1 115.43 ? C17 WCJ 801 A 1 HETATM 5 C C20 WCJ . . . C 2 -29.778 16.683 25.34 1 120.58 ? C20 WCJ 801 A 1 HETATM 6 C C21 WCJ . . . C 2 -28.428 17.871 27.172 1 120.69 ? C21 WCJ 801 A 1 HETATM 7 C C22 WCJ . . . C 2 -28.1 19.063 27.838 1 118.61 ? C22 WCJ 801 A 1 HETATM 8 C C24 WCJ . . . C 2 -30.14 23.756 27.102 1 113.11 ? C24 WCJ 801 A 1 HETATM 9 C C28 WCJ . . . C 2 -26.833 28.359 28.67 1 128.77 ? C28 WCJ 801 A 1 HETATM 10 C C01 WCJ . . . C 2 -22.865 27.515 18.344 1 126.05 ? C01 WCJ 801 A 1 HETATM 11 C C02 WCJ . . . C 2 -23.129 26.243 19.291 1 119.12 ? C02 WCJ 801 A 1 HETATM 12 C C03 WCJ . . . C 2 -23.805 26.637 20.715 1 120.14 ? C03 WCJ 801 A 1 HETATM 13 C C05 WCJ . . . C 2 -24.915 26.111 22.894 1 121.61 ? C05 WCJ 801 A 1 HETATM 14 C C06 WCJ . . . C 2 -26.169 26.788 22.972 1 119.06 ? C06 WCJ 801 A 1 HETATM 15 C C07 WCJ . . . C 2 -26.719 27.133 24.222 1 119.27 ? C07 WCJ 801 A 1 HETATM 16 C C08 WCJ . . . C 2 -26.056 26.832 25.426 1 119.59 ? C08 WCJ 801 A 1 HETATM 17 C C09 WCJ . . . C 2 -26.589 27.172 26.75 1 119.72 ? C09 WCJ 801 A 1 HETATM 18 C C11 WCJ . . . C 2 -28.114 25.149 27.199 1 116.74 ? C11 WCJ 801 A 1 HETATM 19 C C12 WCJ . . . C 2 -27.406 24.11 26.58 1 116.45 ? C12 WCJ 801 A 1 HETATM 20 C C19 WCJ . . . C 2 -29.381 17.943 26.121 1 119.04 ? C19 WCJ 801 A 1 HETATM 21 C C25 WCJ . . . C 2 -29.485 24.949 27.436 1 118.21 ? C25 WCJ 801 A 1 HETATM 22 C C27 WCJ . . . C 2 -25.286 29.31 26.891 1 121.88 ? C27 WCJ 801 A 1 HETATM 23 C C29 WCJ . . . C 2 -27.648 27.175 28.796 1 120.94 ? C29 WCJ 801 A 1 HETATM 24 C C30 WCJ . . . C 2 -28.382 27.052 30.051 1 122.51 ? C30 WCJ 801 A 1 HETATM 25 C C33 WCJ . . . C 2 -27.428 29.115 30.739 1 125.36 ? C33 WCJ 801 A 1 HETATM 26 C C35 WCJ . . . C 2 -24.821 26.174 25.329 1 120.08 ? C35 WCJ 801 A 1 HETATM 27 C C36 WCJ . . . C 2 -24.266 25.829 24.101 1 120.53 ? C36 WCJ 801 A 1 HETATM 28 C C38 WCJ . . . C 2 -23.685 25.156 18.602 1 123.56 ? C38 WCJ 801 A 1 HETATM 29 F F14 WCJ . . . C 2 -27.34 21.957 25.661 1 120.19 ? F14 WCJ 801 A 1 HETATM 30 N N04 WCJ . . . C 2 -24.306 25.734 21.617 1 123.25 ? N04 WCJ 801 A 1 HETATM 31 N N18 WCJ . . . C 2 -29.937 19.154 25.758 1 115.47 ? N18 WCJ 801 A 1 HETATM 32 N N23 WCJ . . . C 2 -28.629 20.272 27.523 1 116.88 ? N23 WCJ 801 A 1 HETATM 33 N N26 WCJ . . . C 2 -26.192 28.331 27.44 1 122.4 ? N26 WCJ 801 A 1 HETATM 34 N N31 WCJ . . . C 2 -29.213 25.997 30.372 1 128.14 ? N31 WCJ 801 A 1 HETATM 35 N N32 WCJ . . . C 2 -28.252 28.047 31.007 1 123.35 ? N32 WCJ 801 A 1 HETATM 36 N N34 WCJ . . . C 2 -26.694 29.347 29.629 1 140.9 ? N34 WCJ 801 A 1 HETATM 37 O O16 WCJ . . . C 2 -30.08 21.492 26.141 1 114.46 ? O16 WCJ 801 A 1 HETATM 38 O O37 WCJ . . . C 2 -23.822 27.841 20.833 1 117.83 ? O37 WCJ 801 A 1 HETATM 39 H H203 WCJ . . . C 2 -30.864 16.533 25.188 1 145.91 ? H203 WCJ 801 A 1 HETATM 40 H H201 WCJ . . . C 2 -29.463 15.72 25.788 1 145.91 ? H201 WCJ 801 A 1 HETATM 41 H H202 WCJ . . . C 2 -29.379 16.61 24.31 1 145.91 ? H202 WCJ 801 A 1 HETATM 42 H H211 WCJ . . . C 2 -27.952 16.93 27.47 1 146.04 ? H211 WCJ 801 A 1 HETATM 43 H H221 WCJ . . . C 2 -27.38 19.104 28.677 1 143.54 ? H221 WCJ 801 A 1 HETATM 44 H H241 WCJ . . . C 2 -31.21 23.646 27.32 1 136.95 ? H241 WCJ 801 A 1 HETATM 45 H H011 WCJ . . . C 2 -22.834 27.288 17.264 1 152.48 ? H011 WCJ 801 A 1 HETATM 46 H H013 WCJ . . . C 2 -21.911 28.039 18.53 1 152.48 ? H013 WCJ 801 A 1 HETATM 47 H H012 WCJ . . . C 2 -23.623 28.314 18.423 1 152.48 ? H012 WCJ 801 A 1 HETATM 48 H H021 WCJ . . . C 2 -22.12 25.783 19.537 1 144.17 ? H021 WCJ 801 A 1 HETATM 49 H H061 WCJ . . . C 2 -26.738 27.057 22.068 1 144.09 ? H061 WCJ 801 A 1 HETATM 50 H H071 WCJ . . . C 2 -27.696 27.656 24.289 1 144.34 ? H071 WCJ 801 A 1 HETATM 51 H H121 WCJ . . . C 2 -26.334 24.217 26.356 1 140.96 ? H121 WCJ 801 A 1 HETATM 52 H H251 WCJ . . . C 2 -30.057 25.77 27.905 1 143.07 ? H251 WCJ 801 A 1 HETATM 53 H H273 WCJ . . . C 2 -24.313 28.878 26.589 1 147.47 ? H273 WCJ 801 A 1 HETATM 54 H H271 WCJ . . . C 2 -25.045 30.122 27.601 1 147.47 ? H271 WCJ 801 A 1 HETATM 55 H H272 WCJ . . . C 2 -25.684 29.81 25.988 1 147.47 ? H272 WCJ 801 A 1 HETATM 56 H H331 WCJ . . . C 2 -27.349 29.901 31.542 1 151.65 ? H331 WCJ 801 A 1 HETATM 57 H H351 WCJ . . . C 2 -24.269 25.921 26.254 1 145.31 ? H351 WCJ 801 A 1 HETATM 58 H H361 WCJ . . . C 2 -23.291 25.321 24.098 1 145.85 ? H361 WCJ 801 A 1 HETATM 59 H H381 WCJ . . . C 2 -23.724 24.079 18.997 1 149.48 ? H381 WCJ 801 A 1 HETATM 60 H H1 WCJ . . . C 2 -23.822 25.107 17.543 1 149.48 ? H1 WCJ 801 A 1 HETATM 61 H H041 WCJ . . . C 2 -24.254 24.738 21.39 1 149.12 ? H041 WCJ 801 A 1 HETATM 62 H H312 WCJ . . . C 2 -29.192 25.117 29.892 1 154.99 ? H312 WCJ 801 A 1 HETATM 63 H H311 WCJ . . . C 2 -29.896 25.99 31.126 1 154.99 ? H311 WCJ 801 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 63 #