data_8STR
#
_model_server_result.job_id            53tCy3HL5V9wV7qp2BQ_4g 
_model_server_result.datetime_utc      '2024-11-05 04:24:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8str 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    8STR 
#
_exptl.entry_id    8STR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              435.38 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-7-fluoronaphthalene-2-carbonitrile 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.09 
_cell.angle_gamma         90 
_cell.entry_id            8STR 
_cell.length_a            161.73 
_cell.length_b            74.04 
_cell.length_c            107.83 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8STR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C23 H15 F2 N3 O4' 
_chem_comp.formula_weight    435.38 
_chem_comp.id                7N1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-7-fluoronaphthalene-2-carbonitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F02 C01 7N1 sing 1 n n 
C01 C00 7N1 doub 2 n y 
C01 C02 7N1 sing 3 n y 
C00 C05 7N1 sing 4 n y 
C02 C03 7N1 doub 5 n y 
C05 O0B 7N1 sing 6 n n 
C05 C04 7N1 doub 7 n y 
C03 C04 7N1 sing 8 n y 
C0D O0B 7N1 sing 9 n n 
C0D C0E 7N1 sing 10 n n 
O0Q C0K 7N1 doub 11 n n 
C04 O0A 7N1 sing 12 n n 
C0E N0H 7N1 sing 13 n n 
C0K N0H 7N1 sing 14 n n 
C0K N0M 7N1 sing 15 n n 
N0H C0P 7N1 sing 16 n n 
N0M C0N 7N1 sing 17 n n 
O0A CAH 7N1 sing 18 n n 
CAM CAH 7N1 doub 19 n y 
CAM CAL 7N1 sing 20 n y 
CAH CAI 7N1 sing 21 n y 
C0P C0O 7N1 doub 22 n n 
C0N O0S 7N1 doub 23 n n 
C0N C0O 7N1 sing 24 n n 
F01 CAL 7N1 sing 25 n n 
CAL CAK 7N1 doub 26 n y 
CAI CAY 7N1 doub 27 n y 
CAI CAJ 7N1 sing 28 n y 
CAY CAZ 7N1 sing 29 n y 
CAK CAJ 7N1 sing 30 n y 
CAJ CBB 7N1 doub 31 n y 
CAZ CBA 7N1 doub 32 n y 
CBB CBA 7N1 sing 33 n y 
CBA CBC 7N1 sing 34 n n 
CBC NBD 7N1 trip 35 n n 
CAK H1 7N1 sing 36 n n 
CAM H2 7N1 sing 37 n n 
CAY H3 7N1 sing 38 n n 
CAZ H4 7N1 sing 39 n n 
CBB H5 7N1 sing 40 n n 
C0P H6 7N1 sing 41 n n 
C00 H7 7N1 sing 42 n n 
C0D H8 7N1 sing 43 n n 
C0D H9 7N1 sing 44 n n 
C0E H10 7N1 sing 45 n n 
C0E H11 7N1 sing 46 n n 
C0O H12 7N1 sing 47 n n 
N0M H13 7N1 sing 48 n n 
C02 H14 7N1 sing 49 n n 
C03 H15 7N1 sing 50 n n 
#
_atom_sites.entry_id                     8STR 
_atom_sites.fract_transf_matrix[1][1]    0.006183 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000989 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013506 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009392 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 7N1 A 1 601 1 7N1 636 . 
D 4 HOH A 1 701 6 HOH HOH . 
D 4 HOH A 2 702 18 HOH HOH . 
D 4 HOH A 3 703 1 HOH HOH . 
D 4 HOH A 4 704 7 HOH HOH . 
D 4 HOH A 5 705 22 HOH HOH . 
D 4 HOH A 6 706 19 HOH HOH . 
D 4 HOH A 7 707 15 HOH HOH . 
D 4 HOH A 8 708 9 HOH HOH . 
D 4 HOH A 9 709 17 HOH HOH . 
D 4 HOH A 10 710 24 HOH HOH . 
D 4 HOH A 11 711 8 HOH HOH . 
D 4 HOH A 12 712 12 HOH HOH . 
D 4 HOH A 13 713 13 HOH HOH . 
D 4 HOH A 14 714 14 HOH HOH . 
D 4 HOH A 15 715 16 HOH HOH . 
D 4 HOH A 16 716 10 HOH HOH . 
D 4 HOH A 17 717 11 HOH HOH . 
E 4 HOH B 1 501 4 HOH HOH . 
E 4 HOH B 2 502 5 HOH HOH . 
E 4 HOH B 3 503 23 HOH HOH . 
E 4 HOH B 4 504 20 HOH HOH . 
E 4 HOH B 5 505 21 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAH 7N1 . . . C 3 357.783 -32.122 143.221 1 63.71 ? CAH 7N1 601 A 1 
HETATM 2 C CAI 7N1 . . . C 3 356.974 -32.628 144.228 1 66.75 ? CAI 7N1 601 A 1 
HETATM 3 C CAJ 7N1 . . . C 3 356.04 -31.812 144.869 1 72.33 ? CAJ 7N1 601 A 1 
HETATM 4 C CAK 7N1 . . . C 3 355.919 -30.481 144.488 1 61.99 ? CAK 7N1 601 A 1 
HETATM 5 C CAL 7N1 . . . C 3 356.731 -30.003 143.481 1 60.07 ? CAL 7N1 601 A 1 
HETATM 6 C CAM 7N1 . . . C 3 357.658 -30.796 142.839 1 68.11 ? CAM 7N1 601 A 1 
HETATM 7 C CAY 7N1 . . . C 3 357.103 -33.959 144.598 1 67.98 ? CAY 7N1 601 A 1 
HETATM 8 C CAZ 7N1 . . . C 3 356.301 -34.471 145.608 1 67.67 ? CAZ 7N1 601 A 1 
HETATM 9 C CBA 7N1 . . . C 3 355.377 -33.66 146.242 1 64.63 ? CBA 7N1 601 A 1 
HETATM 10 C CBB 7N1 . . . C 3 355.245 -32.33 145.873 1 76.78 ? CBB 7N1 601 A 1 
HETATM 11 C CBC 7N1 . . . C 3 354.523 -34.282 147.348 1 68.57 ? CBC 7N1 601 A 1 
HETATM 12 N NBD 7N1 . . . C 3 353.897 -34.753 148.164 1 72.47 ? NBD 7N1 601 A 1 
HETATM 13 C C0P 7N1 . . . C 3 356.747 -35.297 140.039 1 68 ? C0P 7N1 601 A 1 
HETATM 14 C C00 7N1 . . . C 3 361.034 -32.068 140.019 1 52.08 ? C00 7N1 601 A 1 
HETATM 15 C C0D 7N1 . . . C 3 358.926 -33.19 138.615 1 62.27 ? C0D 7N1 601 A 1 
HETATM 16 C C0E 7N1 . . . C 3 357.728 -33.977 138.085 1 70.44 ? C0E 7N1 601 A 1 
HETATM 17 C C0K 7N1 . . . C 3 358.398 -36.367 138.425 1 70.59 ? C0K 7N1 601 A 1 
HETATM 18 C C0N 7N1 . . . C 3 357.468 -37.661 140.296 1 71.89 ? C0N 7N1 601 A 1 
HETATM 19 C C0O 7N1 . . . C 3 356.661 -36.444 140.738 1 70.71 ? C0O 7N1 601 A 1 
HETATM 20 N N0H 7N1 . . . C 3 357.625 -35.21 138.845 1 69.85 ? N0H 7N1 601 A 1 
HETATM 21 N N0M 7N1 . . . C 3 358.305 -37.575 139.157 1 67.41 ? N0M 7N1 601 A 1 
HETATM 22 O O0A 7N1 . . . C 3 358.678 -33.021 142.643 1 56.98 ? O0A 7N1 601 A 1 
HETATM 23 O O0B 7N1 . . . C 3 358.87 -33.19 140.008 1 59.88 ? O0B 7N1 601 A 1 
HETATM 24 O O0Q 7N1 . . . C 3 359.099 -36.29 137.471 1 72 ? O0Q 7N1 601 A 1 
HETATM 25 O O0S 7N1 . . . C 3 357.385 -38.671 140.912 1 71 ? O0S 7N1 601 A 1 
HETATM 26 C C01 7N1 . . . C 3 362.041 -31.473 140.77 1 50.03 ? C01 7N1 601 A 1 
HETATM 27 C C02 7N1 . . . C 3 361.934 -31.389 142.15 1 55.75 ? C02 7N1 601 A 1 
HETATM 28 C C03 7N1 . . . C 3 360.823 -31.898 142.803 1 52.72 ? C03 7N1 601 A 1 
HETATM 29 C C04 7N1 . . . C 3 359.818 -32.471 142.052 1 53.37 ? C04 7N1 601 A 1 
HETATM 30 C C05 7N1 . . . C 3 359.924 -32.571 140.684 1 56.74 ? C05 7N1 601 A 1 
HETATM 31 F F01 7N1 . . . C 3 356.622 -28.698 143.101 1 64.34 ? F01 7N1 601 A 1 
HETATM 32 F F02 7N1 . . . C 3 363.146 -30.981 140.144 1 66.29 ? F02 7N1 601 A 1 
#
_model_server_stats.io_time_ms              56 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           32 
#