data_8STU
#
_model_server_result.job_id            MMpN8ka7uLj785YbcRf10Q 
_model_server_result.datetime_utc      '2025-01-10 22:05:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8stu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":602}' 
#
_entry.id    8STU 
#
_exptl.entry_id    8STU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              424.357 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            8-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-6-fluoroindolizine-2-carbonitrile 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.9 
_cell.angle_gamma         90 
_cell.entry_id            8STU 
_cell.length_a            162.611 
_cell.length_b            73.983 
_cell.length_c            109.092 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8STU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 445 A ASP 443 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? 
metalc ? metalc2 A OE2 GLU 480 A GLU 478 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? 
metalc ? metalc3 A OD1 ASP 500 A ASP 498 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? 
metalc ? metalc4 A OD2 ASP 500 A ASP 498 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? 
metalc ? metalc5 C MG MG . A MG 601 1_555 E O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
#
_chem_comp.formula           'C21 H14 F2 N4 O4' 
_chem_comp.formula_weight    424.357 
_chem_comp.id                H9Y 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              8-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-6-fluoroindolizine-2-carbonitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O0Q C0K H9Y doub 129 n n 
C0K N0M H9Y sing 130 n n 
C0K N0H H9Y sing 131 n n 
C0E C0D H9Y sing 132 n n 
C0E N0H H9Y sing 133 n n 
C0D O0B H9Y sing 134 n n 
N0M C0N H9Y sing 135 n n 
N0H C0P H9Y sing 136 n n 
F07 C01 H9Y sing 137 n n 
C00 C01 H9Y doub 138 n y 
C00 C05 H9Y sing 139 n y 
C0N O0S H9Y doub 140 n n 
C0N C0O H9Y sing 141 n n 
C0P C0O H9Y doub 142 n n 
O0B C05 H9Y sing 143 n n 
C01 C02 H9Y sing 144 n y 
C05 C04 H9Y doub 145 n y 
C02 C03 H9Y doub 146 n y 
C04 C03 H9Y sing 147 n y 
C04 O0A H9Y sing 148 n n 
F13 C0Y H9Y sing 149 n n 
C0Z C0Y H9Y sing 150 n y 
C0Z C0C H9Y doub 151 n y 
O0A C0C H9Y sing 152 n n 
C0Y C0X H9Y doub 153 n y 
C0C C0V H9Y sing 154 n y 
C0X N0W H9Y sing 155 n y 
C0V N0W H9Y sing 156 n y 
C0V C10 H9Y doub 157 n y 
N0W C11 H9Y sing 158 n y 
C10 C14 H9Y sing 159 n y 
C11 C14 H9Y doub 160 n y 
C14 C16 H9Y sing 161 n n 
C16 N19 H9Y trip 162 n n 
C00 H1 H9Y sing 163 n n 
C02 H2 H9Y sing 164 n n 
C03 H3 H9Y sing 165 n n 
C0D H4 H9Y sing 166 n n 
C0D H5 H9Y sing 167 n n 
C0E H6 H9Y sing 168 n n 
C0E H7 H9Y sing 169 n n 
C0O H8 H9Y sing 170 n n 
C0P H9 H9Y sing 171 n n 
C0X H10 H9Y sing 172 n n 
C0Z H11 H9Y sing 173 n n 
C10 H12 H9Y sing 174 n n 
C11 H13 H9Y sing 175 n n 
N0M H14 H9Y sing 176 n n 
#
_atom_sites.entry_id                     8STU 
_atom_sites.fract_transf_matrix[1][1]    0.00615 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001184 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013517 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009335 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MG A 1 601 1 MG MG . 
D 4 H9Y A 1 602 1 H9Y H9Y . 
E 5 HOH A 1 701 8 HOH HOH . 
E 5 HOH A 2 702 9 HOH HOH . 
E 5 HOH A 3 703 10 HOH HOH . 
E 5 HOH A 4 704 15 HOH HOH . 
E 5 HOH A 5 705 6 HOH HOH . 
E 5 HOH A 6 706 4 HOH HOH . 
E 5 HOH A 7 707 7 HOH HOH . 
E 5 HOH A 8 708 26 HOH HOH . 
E 5 HOH A 9 709 1 HOH HOH . 
E 5 HOH A 10 710 17 HOH HOH . 
E 5 HOH A 11 711 13 HOH HOH . 
E 5 HOH A 12 712 12 HOH HOH . 
E 5 HOH A 13 713 5 HOH HOH . 
E 5 HOH A 14 714 25 HOH HOH . 
E 5 HOH A 15 715 2 HOH HOH . 
E 5 HOH A 16 716 16 HOH HOH . 
E 5 HOH A 17 717 27 HOH HOH . 
F 5 HOH B 1 501 23 HOH HOH . 
F 5 HOH B 2 502 11 HOH HOH . 
F 5 HOH B 3 503 24 HOH HOH . 
F 5 HOH B 4 504 19 HOH HOH . 
F 5 HOH B 5 505 18 HOH HOH . 
F 5 HOH B 6 506 20 HOH HOH . 
F 5 HOH B 7 507 21 HOH HOH . 
F 5 HOH B 8 508 14 HOH HOH . 
F 5 HOH B 9 509 3 HOH HOH . 
F 5 HOH B 10 510 22 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N19 H9Y . . . D 4 188.804 -28.866 148.47 1 78.72 ? N19 H9Y 602 A 1 
HETATM 2 C C16 H9Y . . . D 4 189.334 -28.14 147.736 1 76.87 ? C16 H9Y 602 A 1 
HETATM 3 C C00 H9Y . . . D 4 195.602 -26.393 141.213 1 55.85 ? C00 H9Y 602 A 1 
HETATM 4 C C01 H9Y . . . D 4 196.683 -25.734 141.782 1 63.01 ? C01 H9Y 602 A 1 
HETATM 5 C C02 H9Y . . . D 4 196.701 -25.485 143.149 1 60.26 ? C02 H9Y 602 A 1 
HETATM 6 C C03 H9Y . . . D 4 195.639 -25.897 143.947 1 65.34 ? C03 H9Y 602 A 1 
HETATM 7 C C04 H9Y . . . D 4 194.551 -26.548 143.375 1 64.35 ? C04 H9Y 602 A 1 
HETATM 8 C C05 H9Y . . . D 4 194.539 -26.803 142.011 1 62.65 ? C05 H9Y 602 A 1 
HETATM 9 C C0C H9Y . . . D 4 192.483 -25.969 144.461 1 59.51 ? C0C H9Y 602 A 1 
HETATM 10 C C0D H9Y . . . D 4 193.479 -27.525 140.017 1 71.77 ? C0D H9Y 602 A 1 
HETATM 11 C C0E H9Y . . . D 4 192.287 -28.336 139.535 1 72.65 ? C0E H9Y 602 A 1 
HETATM 12 C C0K H9Y . . . D 4 193.073 -30.674 139.76 1 77.11 ? C0K H9Y 602 A 1 
HETATM 13 C C0N H9Y . . . D 4 192.229 -32.161 141.345 1 71.73 ? C0N H9Y 602 A 1 
HETATM 14 C C0O H9Y . . . D 4 191.369 -31.177 141.818 1 79.03 ? C0O H9Y 602 A 1 
HETATM 15 C C0P H9Y . . . D 4 191.404 -29.927 141.21 1 69.27 ? C0P H9Y 602 A 1 
HETATM 16 C C0V H9Y . . . D 4 191.459 -26.275 145.349 1 65.04 ? C0V H9Y 602 A 1 
HETATM 17 C C0X H9Y . . . D 4 190.534 -24.145 145.114 1 62.64 ? C0X H9Y 602 A 1 
HETATM 18 C C0Y H9Y . . . D 4 191.531 -23.777 144.219 1 67.73 ? C0Y H9Y 602 A 1 
HETATM 19 C C0Z H9Y . . . D 4 192.522 -24.7 143.885 1 73.07 ? C0Z H9Y 602 A 1 
HETATM 20 C C10 H9Y . . . D 4 191.181 -27.439 146.058 1 65.18 ? C10 H9Y 602 A 1 
HETATM 21 C C11 H9Y . . . D 4 189.653 -25.883 146.516 1 78.63 ? C11 H9Y 602 A 1 
HETATM 22 C C14 H9Y . . . D 4 190.028 -27.19 146.799 1 75.15 ? C14 H9Y 602 A 1 
HETATM 23 F F07 H9Y . . . D 4 197.801 -25.305 140.938 1 69.42 ? F07 H9Y 602 A 1 
HETATM 24 F F13 H9Y . . . D 4 191.529 -22.492 143.67 1 77.63 ? F13 H9Y 602 A 1 
HETATM 25 N N0H H9Y . . . D 4 192.255 -29.71 140.201 1 67.5 ? N0H H9Y 602 A 1 
HETATM 26 N N0M H9Y . . . D 4 193.056 -31.884 140.331 1 73.22 ? N0M H9Y 602 A 1 
HETATM 27 N N0W H9Y . . . D 4 190.527 -25.368 145.647 1 70.05 ? N0W H9Y 602 A 1 
HETATM 28 O O0A H9Y . . . D 4 193.468 -26.985 144.173 1 62.59 ? O0A H9Y 602 A 1 
HETATM 29 O O0B H9Y . . . D 4 193.449 -27.47 141.446 1 61.6 ? O0B H9Y 602 A 1 
HETATM 30 O O0Q H9Y . . . D 4 193.851 -30.444 138.819 1 69.12 ? O0Q H9Y 602 A 1 
HETATM 31 O O0S H9Y . . . D 4 192.228 -33.422 141.92 1 76.15 ? O0S H9Y 602 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           215 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           31 
#