data_8SU7 # _model_server_result.job_id MbYubCemWqHjFhi0yCfCZA _model_server_result.datetime_utc '2024-12-18 14:54:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8su7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 8SU7 # _exptl.entry_id 8SU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SU7 _cell.length_a 63.712 _cell.length_b 63.712 _cell.length_c 134.865 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_645 -x+1,-y-1,z -1 0 0 0 -1 0 0 0 1 63.712 -63.712 0 3 'crystal symmetry operation' 3_545 -y,x-1,z 0 -1 0 1 0 0 0 0 1 0 -63.712 0 4 'crystal symmetry operation' 4_655 y+1,-x,z 0 1 0 -1 0 0 0 0 1 63.712 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8SU7 _atom_sites.fract_transf_matrix[1][1] 0.015696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015696 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007415 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 201 201 EDO EDO . D 2 EDO A 1 202 202 EDO EDO . E 3 HOH A 1 301 24 HOH HOH . E 3 HOH A 2 302 22 HOH HOH . E 3 HOH A 3 303 50 HOH HOH . E 3 HOH A 4 304 26 HOH HOH . E 3 HOH A 5 305 7 HOH HOH . E 3 HOH A 6 306 52 HOH HOH . E 3 HOH A 7 307 40 HOH HOH . E 3 HOH A 8 308 8 HOH HOH . E 3 HOH A 9 309 6 HOH HOH . E 3 HOH A 10 310 30 HOH HOH . E 3 HOH A 11 311 3 HOH HOH . E 3 HOH A 12 312 14 HOH HOH . E 3 HOH A 13 313 41 HOH HOH . E 3 HOH A 14 314 39 HOH HOH . E 3 HOH A 15 315 2 HOH HOH . E 3 HOH A 16 316 9 HOH HOH . E 3 HOH A 17 317 28 HOH HOH . E 3 HOH A 18 318 45 HOH HOH . E 3 HOH A 19 319 44 HOH HOH . E 3 HOH A 20 320 20 HOH HOH . E 3 HOH A 21 321 17 HOH HOH . E 3 HOH A 22 322 38 HOH HOH . E 3 HOH A 23 323 34 HOH HOH . E 3 HOH A 24 324 54 HOH HOH . E 3 HOH A 25 325 23 HOH HOH . E 3 HOH A 26 326 4 HOH HOH . E 3 HOH A 27 327 5 HOH HOH . E 3 HOH A 28 328 32 HOH HOH . E 3 HOH A 29 329 43 HOH HOH . E 3 HOH A 30 330 19 HOH HOH . E 3 HOH A 31 331 27 HOH HOH . F 3 HOH B 1 201 51 HOH HOH . F 3 HOH B 2 202 37 HOH HOH . F 3 HOH B 3 203 12 HOH HOH . F 3 HOH B 4 204 11 HOH HOH . F 3 HOH B 5 205 15 HOH HOH . F 3 HOH B 6 206 29 HOH HOH . F 3 HOH B 7 207 16 HOH HOH . F 3 HOH B 8 208 25 HOH HOH . F 3 HOH B 9 209 35 HOH HOH . F 3 HOH B 10 210 48 HOH HOH . F 3 HOH B 11 211 31 HOH HOH . F 3 HOH B 12 212 1 HOH HOH . F 3 HOH B 13 213 53 HOH HOH . F 3 HOH B 14 214 18 HOH HOH . F 3 HOH B 15 215 13 HOH HOH . F 3 HOH B 16 216 42 HOH HOH . F 3 HOH B 17 217 36 HOH HOH . F 3 HOH B 18 218 49 HOH HOH . F 3 HOH B 19 219 21 HOH HOH . F 3 HOH B 20 220 33 HOH HOH . F 3 HOH B 21 221 46 HOH HOH . F 3 HOH B 22 222 10 HOH HOH . F 3 HOH B 23 223 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 10.658 -42.822 13.099 1 43.28 ? C1 EDO 201 A 1 HETATM 2 O O1 EDO . . . C 2 9.935 -41.813 13.815 1 38.47 ? O1 EDO 201 A 1 HETATM 3 C C2 EDO . . . C 2 10.542 -42.627 11.606 1 43.38 ? C2 EDO 201 A 1 HETATM 4 O O2 EDO . . . C 2 11.404 -43.462 10.847 1 45.01 ? O2 EDO 201 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 42 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 1303 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 4 #