data_8SV5
#
_model_server_result.job_id            mh6RcbJYQWw4rCYHMR3VEg 
_model_server_result.datetime_utc      '2024-12-18 12:54:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8sv5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":202}' 
#
_entry.id    8SV5 
#
_exptl.entry_id    8SV5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.17 
_cell.angle_gamma         90 
_cell.entry_id            8SV5 
_cell.length_a            63.421 
_cell.length_b            101.849 
_cell.length_c            77.204 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SV5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 K N N 
? 3 R N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8SV5 
_atom_sites.fract_transf_matrix[1][1]    0.015768 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003113 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009818 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013203 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 PH2 A 1 201 201 PH2 PH2 . 
J 2 PH2 B 1 201 201 PH2 PH2 . 
K 3 EDO B 1 202 301 EDO EDO . 
L 2 PH2 C 1 201 201 PH2 PH2 . 
M 2 PH2 D 1 201 201 PH2 PH2 . 
N 2 PH2 D 1 202 201 PH2 PH2 . 
O 2 PH2 E 1 201 201 PH2 PH2 . 
P 2 PH2 G 1 201 201 PH2 PH2 . 
Q 2 PH2 H 1 201 201 PH2 PH2 . 
R 3 EDO H 1 202 301 EDO EDO . 
S 4 HOH A 1 301 104 HOH HOH . 
S 4 HOH A 2 302 18 HOH HOH . 
S 4 HOH A 3 303 129 HOH HOH . 
S 4 HOH A 4 304 26 HOH HOH . 
S 4 HOH A 5 305 37 HOH HOH . 
S 4 HOH A 6 306 1 HOH HOH . 
S 4 HOH A 7 307 91 HOH HOH . 
S 4 HOH A 8 308 7 HOH HOH . 
S 4 HOH A 9 309 58 HOH HOH . 
S 4 HOH A 10 310 2 HOH HOH . 
S 4 HOH A 11 311 122 HOH HOH . 
S 4 HOH A 12 312 54 HOH HOH . 
S 4 HOH A 13 313 103 HOH HOH . 
S 4 HOH A 14 314 165 HOH HOH . 
S 4 HOH A 15 315 8 HOH HOH . 
S 4 HOH A 16 316 68 HOH HOH . 
S 4 HOH A 17 317 167 HOH HOH . 
S 4 HOH A 18 318 63 HOH HOH . 
S 4 HOH A 19 319 178 HOH HOH . 
S 4 HOH A 20 320 179 HOH HOH . 
S 4 HOH A 21 321 144 HOH HOH . 
S 4 HOH A 22 322 180 HOH HOH . 
S 4 HOH A 23 323 75 HOH HOH . 
T 4 HOH B 1 301 66 HOH HOH . 
T 4 HOH B 2 302 146 HOH HOH . 
T 4 HOH B 3 303 20 HOH HOH . 
T 4 HOH B 4 304 57 HOH HOH . 
T 4 HOH B 5 305 59 HOH HOH . 
T 4 HOH B 6 306 141 HOH HOH . 
T 4 HOH B 7 307 47 HOH HOH . 
T 4 HOH B 8 308 176 HOH HOH . 
T 4 HOH B 9 309 108 HOH HOH . 
T 4 HOH B 10 310 12 HOH HOH . 
T 4 HOH B 11 311 52 HOH HOH . 
T 4 HOH B 12 312 116 HOH HOH . 
T 4 HOH B 13 313 152 HOH HOH . 
T 4 HOH B 14 314 111 HOH HOH . 
T 4 HOH B 15 315 125 HOH HOH . 
T 4 HOH B 16 316 39 HOH HOH . 
T 4 HOH B 17 317 142 HOH HOH . 
T 4 HOH B 18 318 175 HOH HOH . 
T 4 HOH B 19 319 137 HOH HOH . 
T 4 HOH B 20 320 117 HOH HOH . 
T 4 HOH B 21 321 126 HOH HOH . 
T 4 HOH B 22 322 84 HOH HOH . 
T 4 HOH B 23 323 53 HOH HOH . 
T 4 HOH B 24 324 139 HOH HOH . 
T 4 HOH B 25 325 171 HOH HOH . 
T 4 HOH B 26 326 124 HOH HOH . 
U 4 HOH C 1 301 147 HOH HOH . 
U 4 HOH C 2 302 95 HOH HOH . 
U 4 HOH C 3 303 109 HOH HOH . 
U 4 HOH C 4 304 15 HOH HOH . 
U 4 HOH C 5 305 23 HOH HOH . 
U 4 HOH C 6 306 40 HOH HOH . 
U 4 HOH C 7 307 145 HOH HOH . 
U 4 HOH C 8 308 17 HOH HOH . 
U 4 HOH C 9 309 38 HOH HOH . 
U 4 HOH C 10 310 87 HOH HOH . 
U 4 HOH C 11 311 88 HOH HOH . 
U 4 HOH C 12 312 131 HOH HOH . 
U 4 HOH C 13 313 174 HOH HOH . 
U 4 HOH C 14 314 32 HOH HOH . 
U 4 HOH C 15 315 181 HOH HOH . 
U 4 HOH C 16 316 112 HOH HOH . 
U 4 HOH C 17 317 159 HOH HOH . 
U 4 HOH C 18 318 157 HOH HOH . 
U 4 HOH C 19 319 85 HOH HOH . 
V 4 HOH D 1 301 71 HOH HOH . 
V 4 HOH D 2 302 93 HOH HOH . 
V 4 HOH D 3 303 96 HOH HOH . 
V 4 HOH D 4 304 182 HOH HOH . 
V 4 HOH D 5 305 41 HOH HOH . 
V 4 HOH D 6 306 64 HOH HOH . 
V 4 HOH D 7 307 16 HOH HOH . 
V 4 HOH D 8 308 28 HOH HOH . 
V 4 HOH D 9 309 151 HOH HOH . 
V 4 HOH D 10 310 90 HOH HOH . 
V 4 HOH D 11 311 3 HOH HOH . 
V 4 HOH D 12 312 72 HOH HOH . 
V 4 HOH D 13 313 50 HOH HOH . 
V 4 HOH D 14 314 65 HOH HOH . 
V 4 HOH D 15 315 97 HOH HOH . 
V 4 HOH D 16 316 78 HOH HOH . 
V 4 HOH D 17 317 73 HOH HOH . 
V 4 HOH D 18 318 172 HOH HOH . 
V 4 HOH D 19 319 170 HOH HOH . 
V 4 HOH D 20 320 136 HOH HOH . 
V 4 HOH D 21 321 135 HOH HOH . 
W 4 HOH E 1 301 82 HOH HOH . 
W 4 HOH E 2 302 31 HOH HOH . 
W 4 HOH E 3 303 21 HOH HOH . 
W 4 HOH E 4 304 33 HOH HOH . 
W 4 HOH E 5 305 42 HOH HOH . 
W 4 HOH E 6 306 60 HOH HOH . 
W 4 HOH E 7 307 140 HOH HOH . 
W 4 HOH E 8 308 106 HOH HOH . 
W 4 HOH E 9 309 24 HOH HOH . 
W 4 HOH E 10 310 130 HOH HOH . 
W 4 HOH E 11 311 25 HOH HOH . 
W 4 HOH E 12 312 94 HOH HOH . 
W 4 HOH E 13 313 43 HOH HOH . 
W 4 HOH E 14 314 35 HOH HOH . 
W 4 HOH E 15 315 133 HOH HOH . 
W 4 HOH E 16 316 79 HOH HOH . 
W 4 HOH E 17 317 62 HOH HOH . 
W 4 HOH E 18 318 123 HOH HOH . 
W 4 HOH E 19 319 121 HOH HOH . 
W 4 HOH E 20 320 148 HOH HOH . 
W 4 HOH E 21 321 168 HOH HOH . 
W 4 HOH E 22 322 81 HOH HOH . 
W 4 HOH E 23 323 105 HOH HOH . 
W 4 HOH E 24 324 154 HOH HOH . 
W 4 HOH E 25 325 177 HOH HOH . 
W 4 HOH E 26 326 143 HOH HOH . 
W 4 HOH E 27 327 138 HOH HOH . 
W 4 HOH E 28 328 153 HOH HOH . 
W 4 HOH E 29 329 163 HOH HOH . 
X 4 HOH F 1 201 74 HOH HOH . 
X 4 HOH F 2 202 156 HOH HOH . 
X 4 HOH F 3 203 22 HOH HOH . 
X 4 HOH F 4 204 5 HOH HOH . 
X 4 HOH F 5 205 9 HOH HOH . 
X 4 HOH F 6 206 34 HOH HOH . 
X 4 HOH F 7 207 11 HOH HOH . 
X 4 HOH F 8 208 14 HOH HOH . 
X 4 HOH F 9 209 160 HOH HOH . 
X 4 HOH F 10 210 48 HOH HOH . 
X 4 HOH F 11 211 102 HOH HOH . 
X 4 HOH F 12 212 45 HOH HOH . 
X 4 HOH F 13 213 61 HOH HOH . 
X 4 HOH F 14 214 128 HOH HOH . 
X 4 HOH F 15 215 161 HOH HOH . 
X 4 HOH F 16 216 164 HOH HOH . 
X 4 HOH F 17 217 77 HOH HOH . 
X 4 HOH F 18 218 166 HOH HOH . 
X 4 HOH F 19 219 113 HOH HOH . 
X 4 HOH F 20 220 149 HOH HOH . 
Y 4 HOH G 1 301 150 HOH HOH . 
Y 4 HOH G 2 302 115 HOH HOH . 
Y 4 HOH G 3 303 118 HOH HOH . 
Y 4 HOH G 4 304 36 HOH HOH . 
Y 4 HOH G 5 305 10 HOH HOH . 
Y 4 HOH G 6 306 76 HOH HOH . 
Y 4 HOH G 7 307 4 HOH HOH . 
Y 4 HOH G 8 308 29 HOH HOH . 
Y 4 HOH G 9 309 80 HOH HOH . 
Y 4 HOH G 10 310 127 HOH HOH . 
Y 4 HOH G 11 311 6 HOH HOH . 
Y 4 HOH G 12 312 30 HOH HOH . 
Y 4 HOH G 13 313 49 HOH HOH . 
Y 4 HOH G 14 314 89 HOH HOH . 
Y 4 HOH G 15 315 101 HOH HOH . 
Y 4 HOH G 16 316 134 HOH HOH . 
Y 4 HOH G 17 317 69 HOH HOH . 
Y 4 HOH G 18 318 119 HOH HOH . 
Y 4 HOH G 19 319 162 HOH HOH . 
Y 4 HOH G 20 320 173 HOH HOH . 
Z 4 HOH H 1 301 56 HOH HOH . 
Z 4 HOH H 2 302 67 HOH HOH . 
Z 4 HOH H 3 303 92 HOH HOH . 
Z 4 HOH H 4 304 46 HOH HOH . 
Z 4 HOH H 5 305 55 HOH HOH . 
Z 4 HOH H 6 306 169 HOH HOH . 
Z 4 HOH H 7 307 98 HOH HOH . 
Z 4 HOH H 8 308 114 HOH HOH . 
Z 4 HOH H 9 309 51 HOH HOH . 
Z 4 HOH H 10 310 83 HOH HOH . 
Z 4 HOH H 11 311 27 HOH HOH . 
Z 4 HOH H 12 312 86 HOH HOH . 
Z 4 HOH H 13 313 19 HOH HOH . 
Z 4 HOH H 14 314 110 HOH HOH . 
Z 4 HOH H 15 315 132 HOH HOH . 
Z 4 HOH H 16 316 120 HOH HOH . 
Z 4 HOH H 17 317 100 HOH HOH . 
Z 4 HOH H 18 318 13 HOH HOH . 
Z 4 HOH H 19 319 70 HOH HOH . 
Z 4 HOH H 20 320 44 HOH HOH . 
Z 4 HOH H 21 321 107 HOH HOH . 
Z 4 HOH H 22 322 99 HOH HOH . 
Z 4 HOH H 23 323 155 HOH HOH . 
Z 4 HOH H 24 324 158 HOH HOH . 
Z 4 HOH H 25 325 183 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . K 3 10.539 17.556 -25.894 1 86.68 ? C1 EDO 202 B 1 
HETATM 2 O O1 EDO . . . K 3 10.092 16.786 -24.799 1 93 ? O1 EDO 202 B 1 
HETATM 3 C C2 EDO . . . K 3 10.668 18.996 -25.572 1 88.65 ? C2 EDO 202 B 1 
HETATM 4 O O2 EDO . . . K 3 10.968 19.233 -24.214 1 90.72 ? O2 EDO 202 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           219 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           4 
#