data_8SV9 # _model_server_result.job_id gSU8gVZ9Mx7yY4FZ_mhVvg _model_server_result.datetime_utc '2025-01-04 01:36:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sv9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 8SV9 # _exptl.entry_id 8SV9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 406.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4P)-4-[(2P)-2-(1,2,5,6-tetrahydropyridin-3-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N-(2,2,2-trifluoroethyl)thiophene-2-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SV9 _cell.length_a 112.06 _cell.length_b 139.96 _cell.length_c 87.45 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SV9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,L 1 1 B,G,H,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 86 A ASN 86 1_555 A N SEP 87 A SEP 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C SEP 87 A SEP 87 1_555 A N VAL 88 A VAL 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C ALA 179 A ALA 179 1_555 A N TPO 180 A TPO 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C TPO 180 A TPO 180 1_555 A N LEU 181 A LEU 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 B C ASN 86 B ASN 86 1_555 B N SEP 87 B SEP 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 B C SEP 87 B SEP 87 1_555 B N VAL 88 B VAL 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 B C ALA 179 B ALA 179 1_555 B N TPO 180 B TPO 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 B C TPO 180 B TPO 180 1_555 B N LEU 181 B LEU 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C19 H17 F3 N4 O S' _chem_comp.formula_weight 406.425 _chem_comp.id WXH _chem_comp.mon_nstd_flag . _chem_comp.name (4P)-4-[(2P)-2-(1,2,5,6-tetrahydropyridin-3-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N-(2,2,2-trifluoroethyl)thiophene-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F07 C05 WXH sing 428 n n C04 C05 WXH sing 429 n n C04 N03 WXH sing 430 n n O01 C02 WXH doub 431 n n C05 F08 WXH sing 432 n n C05 F06 WXH sing 433 n n N03 C02 WXH sing 434 n n C02 C09 WXH sing 435 n n C09 S28 WXH sing 436 n y C09 C10 WXH doub 437 n y S28 C27 WXH sing 438 n y C10 C11 WXH sing 439 n y C27 C11 WXH doub 440 n y C11 C12 WXH sing 441 n n C12 C13 WXH doub 442 n y C12 C17 WXH sing 443 n y C13 C14 WXH sing 444 n y C17 N16 WXH doub 445 n y C14 C15 WXH doub 446 n y C14 C26 WXH sing 447 n y N16 C15 WXH sing 448 n y C15 N18 WXH sing 449 n y C26 C19 WXH doub 450 n y N18 C19 WXH sing 451 n y C19 C20 WXH sing 452 n n C21 C20 WXH doub 453 n n C21 C22 WXH sing 454 n n C20 C25 WXH sing 455 n n C22 C23 WXH sing 456 n n C25 N24 WXH sing 457 n n N24 C23 WXH sing 458 n n C10 H1 WXH sing 459 n n C13 H2 WXH sing 460 n n C17 H3 WXH sing 461 n n C21 H4 WXH sing 462 n n C22 H5 WXH sing 463 n n C22 H6 WXH sing 464 n n C26 H7 WXH sing 465 n n C04 H8 WXH sing 466 n n C04 H9 WXH sing 467 n n C23 H10 WXH sing 468 n n C23 H11 WXH sing 469 n n C25 H12 WXH sing 470 n n C25 H13 WXH sing 471 n n C27 H14 WXH sing 472 n n N03 H15 WXH sing 473 n n N18 H16 WXH sing 474 n n N24 H17 WXH sing 475 n n # _atom_sites.entry_id 8SV9 _atom_sites.fract_transf_matrix[1][1] 0.008924 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007145 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011435 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 WXH A 1 301 1 WXH LIG . D 3 SO4 A 1 302 1 SO4 SO4 . E 3 SO4 A 1 303 3 SO4 SO4 . F 3 SO4 A 1 304 4 SO4 SO4 . G 2 WXH B 1 301 2 WXH LIG . H 3 SO4 B 1 302 2 SO4 SO4 . I 3 SO4 B 1 303 5 SO4 SO4 . J 3 SO4 B 1 304 6 SO4 SO4 . K 4 EDO B 1 305 301 EDO EDO . L 5 HOH A 1 401 23 HOH HOH . L 5 HOH A 2 402 79 HOH HOH . L 5 HOH A 3 403 18 HOH HOH . L 5 HOH A 4 404 54 HOH HOH . L 5 HOH A 5 405 33 HOH HOH . L 5 HOH A 6 406 51 HOH HOH . L 5 HOH A 7 407 67 HOH HOH . L 5 HOH A 8 408 125 HOH HOH . L 5 HOH A 9 409 66 HOH HOH . L 5 HOH A 10 410 49 HOH HOH . L 5 HOH A 11 411 10 HOH HOH . L 5 HOH A 12 412 59 HOH HOH . L 5 HOH A 13 413 4 HOH HOH . L 5 HOH A 14 414 92 HOH HOH . L 5 HOH A 15 415 97 HOH HOH . L 5 HOH A 16 416 90 HOH HOH . L 5 HOH A 17 417 5 HOH HOH . L 5 HOH A 18 418 62 HOH HOH . L 5 HOH A 19 419 121 HOH HOH . L 5 HOH A 20 420 13 HOH HOH . L 5 HOH A 21 421 9 HOH HOH . L 5 HOH A 22 422 98 HOH HOH . L 5 HOH A 23 423 120 HOH HOH . L 5 HOH A 24 424 17 HOH HOH . L 5 HOH A 25 425 85 HOH HOH . L 5 HOH A 26 426 69 HOH HOH . L 5 HOH A 27 427 25 HOH HOH . L 5 HOH A 28 428 19 HOH HOH . L 5 HOH A 29 429 106 HOH HOH . L 5 HOH A 30 430 104 HOH HOH . L 5 HOH A 31 431 96 HOH HOH . L 5 HOH A 32 432 87 HOH HOH . L 5 HOH A 33 433 11 HOH HOH . L 5 HOH A 34 434 31 HOH HOH . L 5 HOH A 35 435 68 HOH HOH . L 5 HOH A 36 436 22 HOH HOH . L 5 HOH A 37 437 38 HOH HOH . L 5 HOH A 38 438 65 HOH HOH . L 5 HOH A 39 439 127 HOH HOH . L 5 HOH A 40 440 117 HOH HOH . L 5 HOH A 41 441 43 HOH HOH . L 5 HOH A 42 442 34 HOH HOH . L 5 HOH A 43 443 47 HOH HOH . L 5 HOH A 44 444 39 HOH HOH . L 5 HOH A 45 445 126 HOH HOH . L 5 HOH A 46 446 73 HOH HOH . L 5 HOH A 47 447 2 HOH HOH . L 5 HOH A 48 448 71 HOH HOH . L 5 HOH A 49 449 63 HOH HOH . L 5 HOH A 50 450 45 HOH HOH . L 5 HOH A 51 451 57 HOH HOH . L 5 HOH A 52 452 122 HOH HOH . L 5 HOH A 53 453 44 HOH HOH . L 5 HOH A 54 454 109 HOH HOH . L 5 HOH A 55 455 93 HOH HOH . L 5 HOH A 56 456 81 HOH HOH . L 5 HOH A 57 457 83 HOH HOH . L 5 HOH A 58 458 1 HOH HOH . L 5 HOH A 59 459 99 HOH HOH . L 5 HOH A 60 460 105 HOH HOH . L 5 HOH A 61 461 84 HOH HOH . L 5 HOH A 62 462 91 HOH HOH . L 5 HOH A 63 463 48 HOH HOH . L 5 HOH A 64 464 41 HOH HOH . L 5 HOH A 65 465 21 HOH HOH . L 5 HOH A 66 466 75 HOH HOH . L 5 HOH A 67 467 61 HOH HOH . L 5 HOH A 68 468 26 HOH HOH . L 5 HOH A 69 469 53 HOH HOH . L 5 HOH A 70 470 103 HOH HOH . L 5 HOH A 71 471 94 HOH HOH . L 5 HOH A 72 472 116 HOH HOH . L 5 HOH A 73 473 56 HOH HOH . L 5 HOH A 74 474 77 HOH HOH . M 5 HOH B 1 401 95 HOH HOH . M 5 HOH B 2 402 88 HOH HOH . M 5 HOH B 3 403 7 HOH HOH . M 5 HOH B 4 404 29 HOH HOH . M 5 HOH B 5 405 60 HOH HOH . M 5 HOH B 6 406 119 HOH HOH . M 5 HOH B 7 407 72 HOH HOH . M 5 HOH B 8 408 15 HOH HOH . M 5 HOH B 9 409 118 HOH HOH . M 5 HOH B 10 410 32 HOH HOH . M 5 HOH B 11 411 8 HOH HOH . M 5 HOH B 12 412 40 HOH HOH . M 5 HOH B 13 413 14 HOH HOH . M 5 HOH B 14 414 46 HOH HOH . M 5 HOH B 15 415 20 HOH HOH . M 5 HOH B 16 416 16 HOH HOH . M 5 HOH B 17 417 37 HOH HOH . M 5 HOH B 18 418 64 HOH HOH . M 5 HOH B 19 419 28 HOH HOH . M 5 HOH B 20 420 35 HOH HOH . M 5 HOH B 21 421 111 HOH HOH . M 5 HOH B 22 422 24 HOH HOH . M 5 HOH B 23 423 114 HOH HOH . M 5 HOH B 24 424 76 HOH HOH . M 5 HOH B 25 425 30 HOH HOH . M 5 HOH B 26 426 58 HOH HOH . M 5 HOH B 27 427 107 HOH HOH . M 5 HOH B 28 428 50 HOH HOH . M 5 HOH B 29 429 3 HOH HOH . M 5 HOH B 30 430 113 HOH HOH . M 5 HOH B 31 431 100 HOH HOH . M 5 HOH B 32 432 12 HOH HOH . M 5 HOH B 33 433 42 HOH HOH . M 5 HOH B 34 434 108 HOH HOH . M 5 HOH B 35 435 74 HOH HOH . M 5 HOH B 36 436 102 HOH HOH . M 5 HOH B 37 437 101 HOH HOH . M 5 HOH B 38 438 27 HOH HOH . M 5 HOH B 39 439 82 HOH HOH . M 5 HOH B 40 440 6 HOH HOH . M 5 HOH B 41 441 110 HOH HOH . M 5 HOH B 42 442 36 HOH HOH . M 5 HOH B 43 443 115 HOH HOH . M 5 HOH B 44 444 78 HOH HOH . M 5 HOH B 45 445 124 HOH HOH . M 5 HOH B 46 446 86 HOH HOH . M 5 HOH B 47 447 128 HOH HOH . M 5 HOH B 48 448 89 HOH HOH . M 5 HOH B 49 449 123 HOH HOH . M 5 HOH B 50 450 80 HOH HOH . M 5 HOH B 51 451 112 HOH HOH . M 5 HOH B 52 452 52 HOH HOH . M 5 HOH B 53 453 55 HOH HOH . M 5 HOH B 54 454 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 WXH . . . C 2 -13.587 -14.57 22.451 1 41.2 ? C10 WXH 301 A 1 HETATM 2 C C13 WXH . . . C 2 -15.47 -15.619 24.742 1 33.82 ? C13 WXH 301 A 1 HETATM 3 C C15 WXH . . . C 2 -17.389 -15.172 26.097 1 40.57 ? C15 WXH 301 A 1 HETATM 4 C C17 WXH . . . C 2 -16.409 -13.382 24.906 1 36.49 ? C17 WXH 301 A 1 HETATM 5 C C20 WXH . . . C 2 -18.654 -18.166 27.805 1 48.36 ? C20 WXH 301 A 1 HETATM 6 C C21 WXH . . . C 2 -18.183 -19.659 27.713 1 45.21 ? C21 WXH 301 A 1 HETATM 7 C C22 WXH . . . C 2 -18.92 -20.654 28.389 1 43.06 ? C22 WXH 301 A 1 HETATM 8 C C26 WXH . . . C 2 -16.807 -17.297 26.179 1 37.52 ? C26 WXH 301 A 1 HETATM 9 C C02 WXH . . . C 2 -11.708 -14.321 20.623 1 39.59 ? C02 WXH 301 A 1 HETATM 10 C C04 WXH . . . C 2 -10.69 -16.421 19.492 1 41.38 ? C04 WXH 301 A 1 HETATM 11 C C05 WXH . . . C 2 -9.6 -17.152 20.27 1 44.66 ? C05 WXH 301 A 1 HETATM 12 C C09 WXH . . . C 2 -12.651 -13.756 21.679 1 43.9 ? C09 WXH 301 A 1 HETATM 13 C C11 WXH . . . C 2 -14.35 -13.694 23.404 1 38.81 ? C11 WXH 301 A 1 HETATM 14 C C12 WXH . . . C 2 -15.462 -14.235 24.394 1 40.67 ? C12 WXH 301 A 1 HETATM 15 C C14 WXH . . . C 2 -16.477 -16.076 25.623 1 44.79 ? C14 WXH 301 A 1 HETATM 16 C C19 WXH . . . C 2 -17.93 -17.097 26.989 1 50.26 ? C19 WXH 301 A 1 HETATM 17 C C23 WXH . . . C 2 -19.962 -20.027 29.507 1 52.72 ? C23 WXH 301 A 1 HETATM 18 C C25 WXH . . . C 2 -19.905 -17.841 28.438 1 61.69 ? C25 WXH 301 A 1 HETATM 19 C C27 WXH . . . C 2 -13.924 -12.303 23.267 1 37.62 ? C27 WXH 301 A 1 HETATM 20 F F06 WXH . . . C 2 -10.207 -18.056 21.161 1 50.17 ? F06 WXH 301 A 1 HETATM 21 F F07 WXH . . . C 2 -8.766 -17.849 19.37 1 44.76 ? F07 WXH 301 A 1 HETATM 22 F F08 WXH . . . C 2 -8.875 -16.251 20.979 1 45.46 ? F08 WXH 301 A 1 HETATM 23 N N03 WXH . . . C 2 -11.605 -15.813 20.494 1 48.36 ? N03 WXH 301 A 1 HETATM 24 N N16 WXH . . . C 2 -17.347 -13.852 25.74 1 48.43 ? N16 WXH 301 A 1 HETATM 25 N N18 WXH . . . C 2 -18.254 -15.841 26.924 1 47.91 ? N18 WXH 301 A 1 HETATM 26 N N24 WXH . . . C 2 -20.74 -19.116 28.972 1 55.86 ? N24 WXH 301 A 1 HETATM 27 O O01 WXH . . . C 2 -11.06 -13.589 19.913 1 40.53 ? O01 WXH 301 A 1 HETATM 28 S S28 WXH . . . C 2 -12.765 -12.209 22.132 1 39.11 ? S28 WXH 301 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #