data_8SVE # _model_server_result.job_id 6F6kyYfXlyvYoPfrvNTbAA _model_server_result.datetime_utc '2024-10-11 05:22:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8sve # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 8SVE # _exptl.entry_id 8SVE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.29 _cell.angle_gamma 90 _cell.entry_id 8SVE _cell.length_a 80.641 _cell.length_b 104.662 _cell.length_c 82.826 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SVE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,K,M 1 1 B,D,F,H,I,J,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 97 H CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf2 A SG CYS 147 H CYS 147 1_555 A SG CYS 203 H CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 B SG CYS 22 I CYS 22 1_555 B SG CYS 97 I CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf4 B SG CYS 147 I CYS 147 1_555 B SG CYS 203 I CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 C SG CYS 23 L CYS 23 1_555 C SG CYS 253 L CYS 253 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf6 C SG CYS 23 L CYS 23 1_555 C SG CYS 253 L CYS 253 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf7 C SG CYS 40 L CYS 40 1_555 C SG CYS 136 L CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf8 C SG CYS 90 L CYS 90 1_555 C SG CYS 142 L CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf9 C SG CYS 299 L CYS 299 1_555 C SG CYS 359 L CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf10 D SG CYS 23 M CYS 23 1_555 D SG CYS 253 M CYS 253 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf11 D SG CYS 40 M CYS 40 1_555 D SG CYS 136 M CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf12 D SG CYS 90 M CYS 90 1_555 D SG CYS 142 M CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf13 D SG CYS 299 M CYS 299 1_555 D SG CYS 359 M CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A C PCA 1 H PCA 1 1_555 A N VAL 2 H VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale2 B C PCA 1 I PCA 1 1_555 B N VAL 2 I VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 8SVE _atom_sites.fract_transf_matrix[1][1] 0.012401 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005859 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009555 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013353 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ACT H 1 301 6 ACT ACT . F 4 EDO I 1 301 3 EDO EDO . G 4 EDO L 1 401 5 EDO EDO . H 4 EDO M 1 401 1 EDO EDO . I 4 EDO M 1 402 2 EDO EDO . J 4 EDO M 1 403 4 EDO EDO . K 5 HOH H 1 401 123 HOH HOH . K 5 HOH H 2 402 158 HOH HOH . K 5 HOH H 3 403 135 HOH HOH . K 5 HOH H 4 404 72 HOH HOH . K 5 HOH H 5 405 101 HOH HOH . K 5 HOH H 6 406 168 HOH HOH . K 5 HOH H 7 407 17 HOH HOH . K 5 HOH H 8 408 79 HOH HOH . K 5 HOH H 9 409 22 HOH HOH . K 5 HOH H 10 410 141 HOH HOH . K 5 HOH H 11 411 224 HOH HOH . K 5 HOH H 12 412 42 HOH HOH . K 5 HOH H 13 413 14 HOH HOH . K 5 HOH H 14 414 70 HOH HOH . K 5 HOH H 15 415 20 HOH HOH . K 5 HOH H 16 416 59 HOH HOH . K 5 HOH H 17 417 176 HOH HOH . K 5 HOH H 18 418 80 HOH HOH . K 5 HOH H 19 419 188 HOH HOH . K 5 HOH H 20 420 186 HOH HOH . K 5 HOH H 21 421 145 HOH HOH . K 5 HOH H 22 422 119 HOH HOH . K 5 HOH H 23 423 40 HOH HOH . K 5 HOH H 24 424 163 HOH HOH . K 5 HOH H 25 425 2 HOH HOH . K 5 HOH H 26 426 12 HOH HOH . K 5 HOH H 27 427 58 HOH HOH . K 5 HOH H 28 428 110 HOH HOH . K 5 HOH H 29 429 112 HOH HOH . K 5 HOH H 30 430 28 HOH HOH . K 5 HOH H 31 431 104 HOH HOH . K 5 HOH H 32 432 93 HOH HOH . K 5 HOH H 33 433 65 HOH HOH . K 5 HOH H 34 434 9 HOH HOH . K 5 HOH H 35 435 52 HOH HOH . K 5 HOH H 36 436 228 HOH HOH . K 5 HOH H 37 437 37 HOH HOH . K 5 HOH H 38 438 205 HOH HOH . K 5 HOH H 39 439 68 HOH HOH . K 5 HOH H 40 440 51 HOH HOH . K 5 HOH H 41 441 227 HOH HOH . K 5 HOH H 42 442 137 HOH HOH . K 5 HOH H 43 443 55 HOH HOH . K 5 HOH H 44 444 130 HOH HOH . K 5 HOH H 45 445 44 HOH HOH . K 5 HOH H 46 446 147 HOH HOH . K 5 HOH H 47 447 18 HOH HOH . K 5 HOH H 48 448 108 HOH HOH . K 5 HOH H 49 449 131 HOH HOH . K 5 HOH H 50 450 84 HOH HOH . K 5 HOH H 51 451 193 HOH HOH . K 5 HOH H 52 452 115 HOH HOH . K 5 HOH H 53 453 120 HOH HOH . K 5 HOH H 54 454 232 HOH HOH . K 5 HOH H 55 455 45 HOH HOH . K 5 HOH H 56 456 116 HOH HOH . K 5 HOH H 57 457 87 HOH HOH . K 5 HOH H 58 458 30 HOH HOH . K 5 HOH H 59 459 220 HOH HOH . K 5 HOH H 60 460 48 HOH HOH . K 5 HOH H 61 461 196 HOH HOH . K 5 HOH H 62 462 182 HOH HOH . K 5 HOH H 63 463 159 HOH HOH . K 5 HOH H 64 464 216 HOH HOH . K 5 HOH H 65 465 78 HOH HOH . K 5 HOH H 66 466 183 HOH HOH . K 5 HOH H 67 467 194 HOH HOH . K 5 HOH H 68 468 184 HOH HOH . K 5 HOH H 69 469 179 HOH HOH . K 5 HOH H 70 470 181 HOH HOH . K 5 HOH H 71 471 160 HOH HOH . K 5 HOH H 72 472 201 HOH HOH . L 5 HOH I 1 401 226 HOH HOH . L 5 HOH I 2 402 36 HOH HOH . L 5 HOH I 3 403 25 HOH HOH . L 5 HOH I 4 404 4 HOH HOH . L 5 HOH I 5 405 35 HOH HOH . L 5 HOH I 6 406 99 HOH HOH . L 5 HOH I 7 407 94 HOH HOH . L 5 HOH I 8 408 166 HOH HOH . L 5 HOH I 9 409 107 HOH HOH . L 5 HOH I 10 410 136 HOH HOH . L 5 HOH I 11 411 106 HOH HOH . L 5 HOH I 12 412 32 HOH HOH . L 5 HOH I 13 413 74 HOH HOH . L 5 HOH I 14 414 175 HOH HOH . L 5 HOH I 15 415 95 HOH HOH . L 5 HOH I 16 416 47 HOH HOH . L 5 HOH I 17 417 39 HOH HOH . L 5 HOH I 18 418 151 HOH HOH . L 5 HOH I 19 419 53 HOH HOH . L 5 HOH I 20 420 223 HOH HOH . L 5 HOH I 21 421 152 HOH HOH . L 5 HOH I 22 422 203 HOH HOH . L 5 HOH I 23 423 161 HOH HOH . L 5 HOH I 24 424 111 HOH HOH . L 5 HOH I 25 425 92 HOH HOH . L 5 HOH I 26 426 133 HOH HOH . L 5 HOH I 27 427 221 HOH HOH . L 5 HOH I 28 428 34 HOH HOH . L 5 HOH I 29 429 143 HOH HOH . L 5 HOH I 30 430 49 HOH HOH . L 5 HOH I 31 431 190 HOH HOH . L 5 HOH I 32 432 154 HOH HOH . L 5 HOH I 33 433 73 HOH HOH . L 5 HOH I 34 434 6 HOH HOH . L 5 HOH I 35 435 61 HOH HOH . L 5 HOH I 36 436 213 HOH HOH . L 5 HOH I 37 437 177 HOH HOH . L 5 HOH I 38 438 54 HOH HOH . L 5 HOH I 39 439 62 HOH HOH . L 5 HOH I 40 440 199 HOH HOH . L 5 HOH I 41 441 124 HOH HOH . L 5 HOH I 42 442 207 HOH HOH . L 5 HOH I 43 443 113 HOH HOH . L 5 HOH I 44 444 173 HOH HOH . L 5 HOH I 45 445 174 HOH HOH . L 5 HOH I 46 446 178 HOH HOH . L 5 HOH I 47 447 162 HOH HOH . L 5 HOH I 48 448 209 HOH HOH . L 5 HOH I 49 449 140 HOH HOH . L 5 HOH I 50 450 164 HOH HOH . L 5 HOH I 51 451 206 HOH HOH . L 5 HOH I 52 452 219 HOH HOH . L 5 HOH I 53 453 148 HOH HOH . L 5 HOH I 54 454 149 HOH HOH . M 5 HOH L 1 501 5 HOH HOH . M 5 HOH L 2 502 169 HOH HOH . M 5 HOH L 3 503 167 HOH HOH . M 5 HOH L 4 504 144 HOH HOH . M 5 HOH L 5 505 171 HOH HOH . M 5 HOH L 6 506 33 HOH HOH . M 5 HOH L 7 507 7 HOH HOH . M 5 HOH L 8 508 19 HOH HOH . M 5 HOH L 9 509 146 HOH HOH . M 5 HOH L 10 510 3 HOH HOH . M 5 HOH L 11 511 88 HOH HOH . M 5 HOH L 12 512 38 HOH HOH . M 5 HOH L 13 513 85 HOH HOH . M 5 HOH L 14 514 208 HOH HOH . M 5 HOH L 15 515 97 HOH HOH . M 5 HOH L 16 516 96 HOH HOH . M 5 HOH L 17 517 129 HOH HOH . M 5 HOH L 18 518 215 HOH HOH . M 5 HOH L 19 519 1 HOH HOH . M 5 HOH L 20 520 127 HOH HOH . M 5 HOH L 21 521 229 HOH HOH . M 5 HOH L 22 522 103 HOH HOH . M 5 HOH L 23 523 89 HOH HOH . M 5 HOH L 24 524 46 HOH HOH . M 5 HOH L 25 525 43 HOH HOH . M 5 HOH L 26 526 218 HOH HOH . M 5 HOH L 27 527 192 HOH HOH . M 5 HOH L 28 528 27 HOH HOH . M 5 HOH L 29 529 155 HOH HOH . M 5 HOH L 30 530 114 HOH HOH . M 5 HOH L 31 531 170 HOH HOH . M 5 HOH L 32 532 77 HOH HOH . M 5 HOH L 33 533 81 HOH HOH . M 5 HOH L 34 534 75 HOH HOH . M 5 HOH L 35 535 56 HOH HOH . M 5 HOH L 36 536 24 HOH HOH . M 5 HOH L 37 537 122 HOH HOH . M 5 HOH L 38 538 15 HOH HOH . M 5 HOH L 39 539 11 HOH HOH . M 5 HOH L 40 540 109 HOH HOH . M 5 HOH L 41 541 67 HOH HOH . M 5 HOH L 42 542 98 HOH HOH . M 5 HOH L 43 543 21 HOH HOH . M 5 HOH L 44 544 198 HOH HOH . M 5 HOH L 45 545 210 HOH HOH . M 5 HOH L 46 546 222 HOH HOH . M 5 HOH L 47 547 202 HOH HOH . M 5 HOH L 48 548 233 HOH HOH . M 5 HOH L 49 549 230 HOH HOH . M 5 HOH L 50 550 217 HOH HOH . M 5 HOH L 51 551 142 HOH HOH . M 5 HOH L 52 552 66 HOH HOH . M 5 HOH L 53 553 225 HOH HOH . M 5 HOH L 54 554 63 HOH HOH . M 5 HOH L 55 555 138 HOH HOH . M 5 HOH L 56 556 153 HOH HOH . N 5 HOH M 1 501 8 HOH HOH . N 5 HOH M 2 502 212 HOH HOH . N 5 HOH M 3 503 157 HOH HOH . N 5 HOH M 4 504 102 HOH HOH . N 5 HOH M 5 505 16 HOH HOH . N 5 HOH M 6 506 13 HOH HOH . N 5 HOH M 7 507 117 HOH HOH . N 5 HOH M 8 508 139 HOH HOH . N 5 HOH M 9 509 69 HOH HOH . N 5 HOH M 10 510 121 HOH HOH . N 5 HOH M 11 511 29 HOH HOH . N 5 HOH M 12 512 86 HOH HOH . N 5 HOH M 13 513 118 HOH HOH . N 5 HOH M 14 514 150 HOH HOH . N 5 HOH M 15 515 134 HOH HOH . N 5 HOH M 16 516 180 HOH HOH . N 5 HOH M 17 517 90 HOH HOH . N 5 HOH M 18 518 195 HOH HOH . N 5 HOH M 19 519 23 HOH HOH . N 5 HOH M 20 520 156 HOH HOH . N 5 HOH M 21 521 82 HOH HOH . N 5 HOH M 22 522 10 HOH HOH . N 5 HOH M 23 523 172 HOH HOH . N 5 HOH M 24 524 165 HOH HOH . N 5 HOH M 25 525 71 HOH HOH . N 5 HOH M 26 526 41 HOH HOH . N 5 HOH M 27 527 83 HOH HOH . N 5 HOH M 28 528 64 HOH HOH . N 5 HOH M 29 529 26 HOH HOH . N 5 HOH M 30 530 125 HOH HOH . N 5 HOH M 31 531 197 HOH HOH . N 5 HOH M 32 532 100 HOH HOH . N 5 HOH M 33 533 57 HOH HOH . N 5 HOH M 34 534 128 HOH HOH . N 5 HOH M 35 535 191 HOH HOH . N 5 HOH M 36 536 91 HOH HOH . N 5 HOH M 37 537 211 HOH HOH . N 5 HOH M 38 538 132 HOH HOH . N 5 HOH M 39 539 204 HOH HOH . N 5 HOH M 40 540 105 HOH HOH . N 5 HOH M 41 541 200 HOH HOH . N 5 HOH M 42 542 189 HOH HOH . N 5 HOH M 43 543 50 HOH HOH . N 5 HOH M 44 544 187 HOH HOH . N 5 HOH M 45 545 60 HOH HOH . N 5 HOH M 46 546 76 HOH HOH . N 5 HOH M 47 547 231 HOH HOH . N 5 HOH M 48 548 126 HOH HOH . N 5 HOH M 49 549 31 HOH HOH . N 5 HOH M 50 550 185 HOH HOH . N 5 HOH M 51 551 214 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . E 3 40.812 32.126 -18.919 1 64.51 ? C ACT 301 H 1 HETATM 2 O O ACT . . . E 3 41.892 31.473 -19.054 1 53.31 ? O ACT 301 H 1 HETATM 3 O OXT ACT . . . E 3 39.686 31.712 -18.497 1 59.36 ? OXT ACT 301 H 1 HETATM 4 C CH3 ACT . . . E 3 40.861 33.658 -19.32 1 47.83 ? CH3 ACT 301 H 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #