data_8SVO # _model_server_result.job_id 3C_R23McCWt4Ow37O2WxNw _model_server_result.datetime_utc '2025-01-10 15:34:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8svo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":504}' # _entry.id 8SVO # _exptl.entry_id 8SVO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8SVO _cell.length_a 84.275 _cell.length_b 89.2 _cell.length_c 105.776 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8SVO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 8SVO _atom_sites.fract_transf_matrix[1][1] 0.011866 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011211 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009454 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 WSO A 1 501 501 WSO WSO . D 3 DMS A 1 504 504 DMS DMS . E 2 WSO B 1 501 501 WSO WSO . F 4 HOH A 1 601 601 HOH HOH . F 4 HOH A 2 602 602 HOH HOH . F 4 HOH A 3 604 604 HOH HOH . F 4 HOH A 4 605 605 HOH HOH . F 4 HOH A 5 606 606 HOH HOH . F 4 HOH A 6 607 607 HOH HOH . F 4 HOH A 7 608 608 HOH HOH . F 4 HOH A 8 609 609 HOH HOH . F 4 HOH A 9 610 610 HOH HOH . F 4 HOH A 10 611 611 HOH HOH . F 4 HOH A 11 612 612 HOH HOH . F 4 HOH A 12 614 614 HOH HOH . F 4 HOH A 13 615 615 HOH HOH . F 4 HOH A 14 616 616 HOH HOH . F 4 HOH A 15 617 617 HOH HOH . F 4 HOH A 16 618 618 HOH HOH . F 4 HOH A 17 619 619 HOH HOH . F 4 HOH A 18 620 620 HOH HOH . F 4 HOH A 19 621 621 HOH HOH . F 4 HOH A 20 622 622 HOH HOH . F 4 HOH A 21 623 623 HOH HOH . F 4 HOH A 22 624 624 HOH HOH . F 4 HOH A 23 625 625 HOH HOH . F 4 HOH A 24 626 626 HOH HOH . F 4 HOH A 25 627 627 HOH HOH . F 4 HOH A 26 628 628 HOH HOH . F 4 HOH A 27 629 629 HOH HOH . F 4 HOH A 28 630 630 HOH HOH . F 4 HOH A 29 631 631 HOH HOH . F 4 HOH A 30 632 632 HOH HOH . F 4 HOH A 31 633 633 HOH HOH . F 4 HOH A 32 634 634 HOH HOH . F 4 HOH A 33 636 636 HOH HOH . F 4 HOH A 34 637 637 HOH HOH . F 4 HOH A 35 638 638 HOH HOH . F 4 HOH A 36 639 639 HOH HOH . F 4 HOH A 37 640 640 HOH HOH . F 4 HOH A 38 641 641 HOH HOH . F 4 HOH A 39 643 643 HOH HOH . G 4 HOH B 1 601 601 HOH HOH . G 4 HOH B 2 602 602 HOH HOH . G 4 HOH B 3 603 603 HOH HOH . G 4 HOH B 4 604 604 HOH HOH . G 4 HOH B 5 605 605 HOH HOH . G 4 HOH B 6 606 606 HOH HOH . G 4 HOH B 7 607 607 HOH HOH . G 4 HOH B 8 608 608 HOH HOH . G 4 HOH B 9 609 609 HOH HOH . G 4 HOH B 10 610 610 HOH HOH . G 4 HOH B 11 611 611 HOH HOH . G 4 HOH B 12 612 612 HOH HOH . G 4 HOH B 13 613 613 HOH HOH . G 4 HOH B 14 614 614 HOH HOH . G 4 HOH B 15 615 615 HOH HOH . G 4 HOH B 16 617 617 HOH HOH . G 4 HOH B 17 618 618 HOH HOH . G 4 HOH B 18 620 620 HOH HOH . G 4 HOH B 19 622 622 HOH HOH . G 4 HOH B 20 623 623 HOH HOH . G 4 HOH B 21 624 624 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 3 11.143 13.965 16.006 1 89.61 ? S DMS 504 A 1 HETATM 2 O O DMS . . . D 3 11.263 12.512 16.338 1 78.8 ? O DMS 504 A 1 HETATM 3 C C1 DMS . . . D 3 12.246 14.362 14.62 1 79.1 ? C1 DMS 504 A 1 HETATM 4 C C2 DMS . . . D 3 11.891 14.948 17.334 1 73.29 ? C2 DMS 504 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #