data_8SW5
#
_model_server_result.job_id            3Yh_GZix-Tk5CXpuUs3Elw 
_model_server_result.datetime_utc      '2024-12-28 21:51:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8sw5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":402}' 
#
_entry.id    8SW5 
#
_exptl.entry_id    8SW5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8SW5 
_cell.length_a            92.876 
_cell.length_b            92.876 
_cell.length_c            200.107 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SW5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,K,M 1 1 
B,D,H,I,J,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 63 A ASP 64 1_555 F MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
metalc ? metalc2 A NE2 HIS 65 A HIS 66 1_555 F MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc3 A OD2 ASP 91 A ASP 92 1_555 E MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc4 A OD2 ASP 91 A ASP 92 1_555 F MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
metalc ? metalc5 A OD1 ASN 123 A ASN 124 1_555 E MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? 
metalc ? metalc6 A NE2 HIS 172 A HIS 173 1_555 E MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
metalc ? metalc7 A ND1 HIS 247 A HIS 248 1_555 E MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc8 E MN MN . A MN 401 1_555 G O2 PO4 . A PO4 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc9 E MN MN . A MN 401 1_555 K O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? 
metalc ? metalc10 F MN MN . A MN 402 1_555 G O4 PO4 . A PO4 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc11 F MN MN . A MN 402 1_555 K O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? 
metalc ? metalc12 F MN MN . A MN 402 1_555 K O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc13 B OD2 ASP 63 B ASP 64 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc14 B NE2 HIS 65 B HIS 66 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
metalc ? metalc15 B OD2 ASP 91 B ASP 92 1_555 H MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc16 B OD2 ASP 91 B ASP 92 1_555 I MN MN . B MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc17 B OD1 ASN 123 B ASN 124 1_555 I MN MN . B MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc18 B NE2 HIS 172 B HIS 173 1_555 I MN MN . B MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc19 B ND1 HIS 247 B HIS 248 1_555 I MN MN . B MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc20 H MN MN . B MN 401 1_555 J O1 PO4 . B PO4 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? 
metalc ? metalc21 H MN MN . B MN 401 1_555 L O HOH . B HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc22 H MN MN . B MN 401 1_555 L O HOH . B HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
metalc ? metalc23 I MN MN . B MN 402 1_555 J O3 PO4 . B PO4 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? 
metalc ? metalc24 I MN MN . B MN 402 1_555 L O HOH . B HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8SW5 
_atom_sites.fract_transf_matrix[1][1]    0.010767 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010767 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004997 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MN A 1 401 1 MN MN . 
F 3 MN A 1 402 3 MN MN . 
G 4 PO4 A 1 403 1 PO4 PO4 . 
H 3 MN B 1 401 4 MN MN . 
I 3 MN B 1 402 5 MN MN . 
J 4 PO4 B 1 403 2 PO4 PO4 . 
K 5 HOH A 1 501 60 HOH HOH . 
K 5 HOH A 2 502 16 HOH HOH . 
K 5 HOH A 3 503 69 HOH HOH . 
K 5 HOH A 4 504 36 HOH HOH . 
K 5 HOH A 5 505 59 HOH HOH . 
K 5 HOH A 6 506 9 HOH HOH . 
K 5 HOH A 7 507 2 HOH HOH . 
K 5 HOH A 8 508 10 HOH HOH . 
K 5 HOH A 9 509 29 HOH HOH . 
K 5 HOH A 10 510 48 HOH HOH . 
K 5 HOH A 11 511 19 HOH HOH . 
K 5 HOH A 12 512 7 HOH HOH . 
K 5 HOH A 13 513 11 HOH HOH . 
K 5 HOH A 14 514 80 HOH HOH . 
K 5 HOH A 15 515 73 HOH HOH . 
K 5 HOH A 16 516 54 HOH HOH . 
K 5 HOH A 17 517 25 HOH HOH . 
K 5 HOH A 18 518 85 HOH HOH . 
K 5 HOH A 19 519 12 HOH HOH . 
K 5 HOH A 20 520 62 HOH HOH . 
K 5 HOH A 21 521 58 HOH HOH . 
K 5 HOH A 22 522 6 HOH HOH . 
K 5 HOH A 23 523 49 HOH HOH . 
K 5 HOH A 24 524 31 HOH HOH . 
K 5 HOH A 25 525 37 HOH HOH . 
K 5 HOH A 26 526 21 HOH HOH . 
K 5 HOH A 27 527 76 HOH HOH . 
K 5 HOH A 28 528 17 HOH HOH . 
K 5 HOH A 29 529 20 HOH HOH . 
K 5 HOH A 30 530 74 HOH HOH . 
K 5 HOH A 31 531 75 HOH HOH . 
K 5 HOH A 32 532 15 HOH HOH . 
K 5 HOH A 33 533 67 HOH HOH . 
K 5 HOH A 34 534 3 HOH HOH . 
K 5 HOH A 35 535 22 HOH HOH . 
K 5 HOH A 36 536 86 HOH HOH . 
K 5 HOH A 37 537 28 HOH HOH . 
K 5 HOH A 38 538 65 HOH HOH . 
K 5 HOH A 39 539 18 HOH HOH . 
K 5 HOH A 40 540 14 HOH HOH . 
K 5 HOH A 41 541 24 HOH HOH . 
K 5 HOH A 42 542 78 HOH HOH . 
K 5 HOH A 43 543 30 HOH HOH . 
K 5 HOH A 44 544 71 HOH HOH . 
K 5 HOH A 45 545 41 HOH HOH . 
K 5 HOH A 46 546 56 HOH HOH . 
K 5 HOH A 47 547 40 HOH HOH . 
K 5 HOH A 48 548 42 HOH HOH . 
L 5 HOH B 1 501 47 HOH HOH . 
L 5 HOH B 2 502 61 HOH HOH . 
L 5 HOH B 3 503 81 HOH HOH . 
L 5 HOH B 4 504 64 HOH HOH . 
L 5 HOH B 5 505 82 HOH HOH . 
L 5 HOH B 6 506 57 HOH HOH . 
L 5 HOH B 7 507 34 HOH HOH . 
L 5 HOH B 8 508 63 HOH HOH . 
L 5 HOH B 9 509 68 HOH HOH . 
L 5 HOH B 10 510 70 HOH HOH . 
L 5 HOH B 11 511 13 HOH HOH . 
L 5 HOH B 12 512 43 HOH HOH . 
L 5 HOH B 13 513 5 HOH HOH . 
L 5 HOH B 14 514 44 HOH HOH . 
L 5 HOH B 15 515 66 HOH HOH . 
L 5 HOH B 16 516 46 HOH HOH . 
L 5 HOH B 17 517 8 HOH HOH . 
L 5 HOH B 18 518 51 HOH HOH . 
L 5 HOH B 19 519 23 HOH HOH . 
L 5 HOH B 20 520 35 HOH HOH . 
L 5 HOH B 21 521 45 HOH HOH . 
L 5 HOH B 22 522 84 HOH HOH . 
L 5 HOH B 23 523 33 HOH HOH . 
L 5 HOH B 24 524 39 HOH HOH . 
L 5 HOH B 25 525 83 HOH HOH . 
L 5 HOH B 26 526 32 HOH HOH . 
L 5 HOH B 27 527 50 HOH HOH . 
L 5 HOH B 28 528 53 HOH HOH . 
L 5 HOH B 29 529 52 HOH HOH . 
L 5 HOH B 30 530 55 HOH HOH . 
L 5 HOH B 31 531 38 HOH HOH . 
M 5 HOH C 1 501 26 HOH HOH . 
M 5 HOH C 2 502 72 HOH HOH . 
M 5 HOH C 3 503 79 HOH HOH . 
N 5 HOH D 1 501 77 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               9.709 
_atom_site.Cartn_y               -35.509 
_atom_site.Cartn_z               -20.66 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        45.66 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          20 
_model_server_stats.element_count           1 
#