data_8SX4
#
_model_server_result.job_id            p6rx9F5jSXFxEuTrFC406w 
_model_server_result.datetime_utc      '2024-11-08 21:17:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8sx4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    8SX4 
#
_exptl.entry_id    8SX4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              449.808 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(~{Z})-4-[2-azanyl-7-[(5-chloranyl-1~{H}-indol-2-yl)methyl]-6-oxidanylidene-1~{H}-purin-9-yl]but-2-enyl]phosphonic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.13 
_cell.angle_gamma         90 
_cell.entry_id            8SX4 
_cell.length_a            49.125 
_cell.length_b            74.328 
_cell.length_c            51.877 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SX4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C18 H19 Cl N6 O4 P 1' 
_chem_comp.formula_weight    449.808 
_chem_comp.id                WXL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(~{Z})-4-[2-azanyl-7-[(5-chloranyl-1~{H}-indol-2-yl)methyl]-6-oxidanylidene-1~{H}-purin-9-yl]but-2-enyl]phosphonic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C5 C6 WXL doub 426 z n 
C5 C4 WXL sing 427 n n 
C6 C7 WXL sing 428 n n 
C4 N3 WXL sing 429 n n 
C7 P WXL sing 430 n n 
N1 C1 WXL sing 431 n n 
O3 P WXL doub 432 n n 
N2 C1 WXL doub 433 n n 
N2 C3 WXL sing 434 n n 
C1 N WXL sing 435 n n 
P O2 WXL sing 436 n n 
P O1 WXL sing 437 n n 
N3 C3 WXL sing 438 n y 
N3 C8 WXL doub 439 n y 
C3 C2 WXL doub 440 n y 
N C WXL sing 441 n n 
C8 N4 WXL sing 442 n y 
C2 C WXL sing 443 n n 
C2 N4 WXL sing 444 n y 
C O WXL doub 445 n n 
N4 C9 WXL sing 446 n n 
C9 C10 WXL sing 447 n n 
N5 C10 WXL sing 448 n y 
N5 C17 WXL sing 449 n y 
C10 C11 WXL doub 450 n y 
C17 C16 WXL doub 451 n y 
C17 C12 WXL sing 452 n y 
C16 C15 WXL sing 453 n y 
C11 C12 WXL sing 454 n y 
C12 C13 WXL doub 455 n y 
C15 C14 WXL doub 456 n y 
C13 C14 WXL sing 457 n y 
C14 CL WXL sing 458 n n 
C4 H1 WXL sing 459 n n 
C4 H2 WXL sing 460 n n 
C5 H3 WXL sing 461 n n 
C6 H4 WXL sing 462 n n 
N1 H5 WXL sing 463 n n 
N1 H6 WXL sing 464 n n 
C7 H7 WXL sing 465 n n 
C7 H8 WXL sing 466 n n 
C8 H9 WXL sing 467 n n 
N H10 WXL sing 468 n n 
C13 H11 WXL sing 469 n n 
C15 H12 WXL sing 470 n n 
C16 H13 WXL sing 471 n n 
C11 H14 WXL sing 472 n n 
N5 H15 WXL sing 473 n n 
C9 H16 WXL sing 474 n n 
C9 H17 WXL sing 475 n n 
O2 H18 WXL sing 476 n n 
O1 H19 WXL sing 477 n n 
#
_atom_sites.entry_id                     8SX4 
_atom_sites.fract_transf_matrix[1][1]    0.020356 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002546 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013454 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019427 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 WXL A 1 301 301 WXL 601 . 
D 3 M7G B 1 301 301 M7G M7G . 
E 4 HOH A 1 401 118 HOH HOH . 
E 4 HOH A 2 402 90 HOH HOH . 
E 4 HOH A 3 403 3 HOH HOH . 
E 4 HOH A 4 404 134 HOH HOH . 
E 4 HOH A 5 405 71 HOH HOH . 
E 4 HOH A 6 406 128 HOH HOH . 
E 4 HOH A 7 407 82 HOH HOH . 
E 4 HOH A 8 408 163 HOH HOH . 
E 4 HOH A 9 409 11 HOH HOH . 
E 4 HOH A 10 410 5 HOH HOH . 
E 4 HOH A 11 411 126 HOH HOH . 
E 4 HOH A 12 412 48 HOH HOH . 
E 4 HOH A 13 413 164 HOH HOH . 
E 4 HOH A 14 414 83 HOH HOH . 
E 4 HOH A 15 415 4 HOH HOH . 
E 4 HOH A 16 416 121 HOH HOH . 
E 4 HOH A 17 417 51 HOH HOH . 
E 4 HOH A 18 418 63 HOH HOH . 
E 4 HOH A 19 419 7 HOH HOH . 
E 4 HOH A 20 420 13 HOH HOH . 
E 4 HOH A 21 421 173 HOH HOH . 
E 4 HOH A 22 422 18 HOH HOH . 
E 4 HOH A 23 423 30 HOH HOH . 
E 4 HOH A 24 424 53 HOH HOH . 
E 4 HOH A 25 425 44 HOH HOH . 
E 4 HOH A 26 426 180 HOH HOH . 
E 4 HOH A 27 427 100 HOH HOH . 
E 4 HOH A 28 428 19 HOH HOH . 
E 4 HOH A 29 429 36 HOH HOH . 
E 4 HOH A 30 430 61 HOH HOH . 
E 4 HOH A 31 431 72 HOH HOH . 
E 4 HOH A 32 432 28 HOH HOH . 
E 4 HOH A 33 433 170 HOH HOH . 
E 4 HOH A 34 434 67 HOH HOH . 
E 4 HOH A 35 435 159 HOH HOH . 
E 4 HOH A 36 436 152 HOH HOH . 
E 4 HOH A 37 437 8 HOH HOH . 
E 4 HOH A 38 438 135 HOH HOH . 
E 4 HOH A 39 439 39 HOH HOH . 
E 4 HOH A 40 440 15 HOH HOH . 
E 4 HOH A 41 441 86 HOH HOH . 
E 4 HOH A 42 442 165 HOH HOH . 
E 4 HOH A 43 443 43 HOH HOH . 
E 4 HOH A 44 444 60 HOH HOH . 
E 4 HOH A 45 445 104 HOH HOH . 
E 4 HOH A 46 446 20 HOH HOH . 
E 4 HOH A 47 447 117 HOH HOH . 
E 4 HOH A 48 448 133 HOH HOH . 
E 4 HOH A 49 449 98 HOH HOH . 
E 4 HOH A 50 450 97 HOH HOH . 
E 4 HOH A 51 451 22 HOH HOH . 
E 4 HOH A 52 452 150 HOH HOH . 
E 4 HOH A 53 453 140 HOH HOH . 
E 4 HOH A 54 454 38 HOH HOH . 
E 4 HOH A 55 455 122 HOH HOH . 
E 4 HOH A 56 456 130 HOH HOH . 
E 4 HOH A 57 457 70 HOH HOH . 
E 4 HOH A 58 458 49 HOH HOH . 
E 4 HOH A 59 459 178 HOH HOH . 
E 4 HOH A 60 460 137 HOH HOH . 
E 4 HOH A 61 461 111 HOH HOH . 
E 4 HOH A 62 462 54 HOH HOH . 
E 4 HOH A 63 463 102 HOH HOH . 
E 4 HOH A 64 464 141 HOH HOH . 
E 4 HOH A 65 465 23 HOH HOH . 
E 4 HOH A 66 466 148 HOH HOH . 
E 4 HOH A 67 467 101 HOH HOH . 
E 4 HOH A 68 468 136 HOH HOH . 
E 4 HOH A 69 469 125 HOH HOH . 
E 4 HOH A 70 470 80 HOH HOH . 
E 4 HOH A 71 471 169 HOH HOH . 
E 4 HOH A 72 472 120 HOH HOH . 
E 4 HOH A 73 473 113 HOH HOH . 
E 4 HOH A 74 474 168 HOH HOH . 
E 4 HOH A 75 475 177 HOH HOH . 
E 4 HOH A 76 476 45 HOH HOH . 
F 4 HOH B 1 401 155 HOH HOH . 
F 4 HOH B 2 402 105 HOH HOH . 
F 4 HOH B 3 403 58 HOH HOH . 
F 4 HOH B 4 404 160 HOH HOH . 
F 4 HOH B 5 405 119 HOH HOH . 
F 4 HOH B 6 406 40 HOH HOH . 
F 4 HOH B 7 407 154 HOH HOH . 
F 4 HOH B 8 408 25 HOH HOH . 
F 4 HOH B 9 409 162 HOH HOH . 
F 4 HOH B 10 410 10 HOH HOH . 
F 4 HOH B 11 411 2 HOH HOH . 
F 4 HOH B 12 412 29 HOH HOH . 
F 4 HOH B 13 413 55 HOH HOH . 
F 4 HOH B 14 414 85 HOH HOH . 
F 4 HOH B 15 415 103 HOH HOH . 
F 4 HOH B 16 416 9 HOH HOH . 
F 4 HOH B 17 417 172 HOH HOH . 
F 4 HOH B 18 418 34 HOH HOH . 
F 4 HOH B 19 419 176 HOH HOH . 
F 4 HOH B 20 420 68 HOH HOH . 
F 4 HOH B 21 421 174 HOH HOH . 
F 4 HOH B 22 422 64 HOH HOH . 
F 4 HOH B 23 423 16 HOH HOH . 
F 4 HOH B 24 424 73 HOH HOH . 
F 4 HOH B 25 425 87 HOH HOH . 
F 4 HOH B 26 426 112 HOH HOH . 
F 4 HOH B 27 427 33 HOH HOH . 
F 4 HOH B 28 428 42 HOH HOH . 
F 4 HOH B 29 429 27 HOH HOH . 
F 4 HOH B 30 430 59 HOH HOH . 
F 4 HOH B 31 431 124 HOH HOH . 
F 4 HOH B 32 432 35 HOH HOH . 
F 4 HOH B 33 433 37 HOH HOH . 
F 4 HOH B 34 434 110 HOH HOH . 
F 4 HOH B 35 435 93 HOH HOH . 
F 4 HOH B 36 436 31 HOH HOH . 
F 4 HOH B 37 437 116 HOH HOH . 
F 4 HOH B 38 438 17 HOH HOH . 
F 4 HOH B 39 439 88 HOH HOH . 
F 4 HOH B 40 440 147 HOH HOH . 
F 4 HOH B 41 441 156 HOH HOH . 
F 4 HOH B 42 442 107 HOH HOH . 
F 4 HOH B 43 443 21 HOH HOH . 
F 4 HOH B 44 444 32 HOH HOH . 
F 4 HOH B 45 445 91 HOH HOH . 
F 4 HOH B 46 446 146 HOH HOH . 
F 4 HOH B 47 447 6 HOH HOH . 
F 4 HOH B 48 448 74 HOH HOH . 
F 4 HOH B 49 449 24 HOH HOH . 
F 4 HOH B 50 450 138 HOH HOH . 
F 4 HOH B 51 451 46 HOH HOH . 
F 4 HOH B 52 452 157 HOH HOH . 
F 4 HOH B 53 453 52 HOH HOH . 
F 4 HOH B 54 454 144 HOH HOH . 
F 4 HOH B 55 455 143 HOH HOH . 
F 4 HOH B 56 456 96 HOH HOH . 
F 4 HOH B 57 457 123 HOH HOH . 
F 4 HOH B 58 458 92 HOH HOH . 
F 4 HOH B 59 459 57 HOH HOH . 
F 4 HOH B 60 460 76 HOH HOH . 
F 4 HOH B 61 461 139 HOH HOH . 
F 4 HOH B 62 462 56 HOH HOH . 
F 4 HOH B 63 463 77 HOH HOH . 
F 4 HOH B 64 464 66 HOH HOH . 
F 4 HOH B 65 465 106 HOH HOH . 
F 4 HOH B 66 466 166 HOH HOH . 
F 4 HOH B 67 467 79 HOH HOH . 
F 4 HOH B 68 468 129 HOH HOH . 
F 4 HOH B 69 469 41 HOH HOH . 
F 4 HOH B 70 470 78 HOH HOH . 
F 4 HOH B 71 471 14 HOH HOH . 
F 4 HOH B 72 472 151 HOH HOH . 
F 4 HOH B 73 473 75 HOH HOH . 
F 4 HOH B 74 474 47 HOH HOH . 
F 4 HOH B 75 475 94 HOH HOH . 
F 4 HOH B 76 476 142 HOH HOH . 
F 4 HOH B 77 477 145 HOH HOH . 
F 4 HOH B 78 478 115 HOH HOH . 
F 4 HOH B 79 479 95 HOH HOH . 
F 4 HOH B 80 480 167 HOH HOH . 
F 4 HOH B 81 481 132 HOH HOH . 
F 4 HOH B 82 482 50 HOH HOH . 
F 4 HOH B 83 483 108 HOH HOH . 
F 4 HOH B 84 484 179 HOH HOH . 
F 4 HOH B 85 485 84 HOH HOH . 
F 4 HOH B 86 486 175 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 WXL . . . C 2 20.822 12.833 -11.508 1 36.03 ? C4 WXL 301 A 1 
HETATM 2 C C5 WXL . . . C 2 22.201 12.26 -11.599 1 39.04 ? C5 WXL 301 A 1 
HETATM 3 C C6 WXL . . . C 2 23.351 12.934 -11.578 1 41.75 ? C6 WXL 301 A 1 
HETATM 4 N N1 WXL . . . C 2 15.964 10.797 -11.214 1 30.68 ? N1 WXL 301 A 1 
HETATM 5 C C7 WXL . . . C 2 23.51 14.42 -11.427 1 44.47 ? C7 WXL 301 A 1 
HETATM 6 C C8 WXL . . . C 2 20.75 12.907 -9.018 1 31.56 ? C8 WXL 301 A 1 
HETATM 7 N N2 WXL . . . C 2 18.087 11.639 -10.905 1 30.68 ? N2 WXL 301 A 1 
HETATM 8 O O WXL . . . C 2 17.132 11.705 -6.888 1 28.28 ? O WXL 301 A 1 
HETATM 9 C C3 WXL . . . C 2 18.947 12.068 -9.964 1 31.19 ? C3 WXL 301 A 1 
HETATM 10 C C2 WXL . . . C 2 18.74 12.107 -8.623 1 29.92 ? C2 WXL 301 A 1 
HETATM 11 N N WXL . . . C 2 16.636 11.254 -9.058 1 29.75 ? N WXL 301 A 1 
HETATM 12 C C1 WXL . . . C 2 16.923 11.237 -10.397 1 30.34 ? C1 WXL 301 A 1 
HETATM 13 C C WXL . . . C 2 17.493 11.687 -8.063 1 29.23 ? C WXL 301 A 1 
HETATM 14 CL CL WXL . . . C 2 22.812 6.833 -2.83 1 25.02 ? CL WXL 301 A 1 
HETATM 15 C C14 WXL . . . C 2 22.666 8.271 -3.806 1 25.23 ? C14 WXL 301 A 1 
HETATM 16 C C13 WXL . . . C 2 21.442 8.913 -3.875 1 25.64 ? C13 WXL 301 A 1 
HETATM 17 C C15 WXL . . . C 2 23.786 8.751 -4.467 1 25.5 ? C15 WXL 301 A 1 
HETATM 18 C C16 WXL . . . C 2 23.692 9.911 -5.224 1 25.98 ? C16 WXL 301 A 1 
HETATM 19 C C17 WXL . . . C 2 22.461 10.55 -5.321 1 26.06 ? C17 WXL 301 A 1 
HETATM 20 C C12 WXL . . . C 2 21.323 10.066 -4.65 1 26.09 ? C12 WXL 301 A 1 
HETATM 21 C C11 WXL . . . C 2 20.232 10.927 -5.016 1 26.42 ? C11 WXL 301 A 1 
HETATM 22 N N5 WXL . . . C 2 22.074 11.645 -6.081 1 26.52 ? N5 WXL 301 A 1 
HETATM 23 C C10 WXL . . . C 2 20.738 11.895 -5.917 1 27.23 ? C10 WXL 301 A 1 
HETATM 24 C C9 WXL . . . C 2 20.061 13.014 -6.637 1 28.65 ? C9 WXL 301 A 1 
HETATM 25 N N4 WXL . . . C 2 19.888 12.626 -8.043 1 30.1 1 N4 WXL 301 A 1 
HETATM 26 N N3 WXL . . . C 2 20.199 12.583 -10.194 1 33.08 ? N3 WXL 301 A 1 
HETATM 27 P P WXL . . . C 2 24.828 14.888 -10.297 1 46.93 ? P WXL 301 A 1 
HETATM 28 O O3 WXL . . . C 2 26.169 14.814 -10.958 1 46.91 ? O3 WXL 301 A 1 
HETATM 29 O O2 WXL . . . C 2 24.508 16.326 -9.821 1 47.17 ? O2 WXL 301 A 1 
HETATM 30 O O1 WXL . . . C 2 24.703 13.962 -9.059 1 47.33 ? O1 WXL 301 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           218 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           30 
#