data_8SZC
#
_model_server_result.job_id            6TXHQmHe2POsQ6KfRTi7GQ 
_model_server_result.datetime_utc      '2025-03-12 04:18:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8szc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":605}' 
#
_entry.id    8SZC 
#
_exptl.entry_id    8SZC 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    21 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8SZC 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8SZC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 470 D SER 470 1_555 N MG MG . D MG 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc2 M O2G ATP . D ATP 711 1_555 N MG MG . D MG 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? 
metalc ? metalc3 M O1B ATP . D ATP 711 1_555 N MG MG . D MG 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                POV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     POPC 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C12 POV sing 374 n n 
N C13 POV sing 375 n n 
N C14 POV sing 376 n n 
N C15 POV sing 377 n n 
P O11 POV sing 378 n n 
P O12 POV sing 379 n n 
P O13 POV sing 380 n n 
P O14 POV doub 381 n n 
C1 C2 POV sing 382 n n 
C1 O11 POV sing 383 n n 
C1 H1 POV sing 384 n n 
C1 H1A POV sing 385 n n 
C2 C3 POV sing 386 n n 
C2 O21 POV sing 387 n n 
C2 H2 POV sing 388 n n 
C3 O31 POV sing 389 n n 
C3 H3 POV sing 390 n n 
C3 H3A POV sing 391 n n 
C210 C211 POV sing 392 n n 
C210 C29 POV doub 393 z n 
C210 H210 POV sing 394 n n 
C310 C311 POV sing 395 n n 
C310 C39 POV sing 396 n n 
C310 H310 POV sing 397 n n 
C310 H31A POV sing 398 n n 
C11 C12 POV sing 399 n n 
C11 O12 POV sing 400 n n 
C11 H11 POV sing 401 n n 
C11 H11A POV sing 402 n n 
C211 C212 POV sing 403 n n 
C211 H211 POV sing 404 n n 
C211 H21A POV sing 405 n n 
C311 C312 POV sing 406 n n 
C311 H311 POV sing 407 n n 
C311 H31B POV sing 408 n n 
C12 H12 POV sing 409 n n 
C12 H12A POV sing 410 n n 
C212 C213 POV sing 411 n n 
C212 H212 POV sing 412 n n 
C212 H21B POV sing 413 n n 
C312 C313 POV sing 414 n n 
C312 H312 POV sing 415 n n 
C312 H31C POV sing 416 n n 
C13 H13 POV sing 417 n n 
C13 H13A POV sing 418 n n 
C13 H13B POV sing 419 n n 
C213 C214 POV sing 420 n n 
C213 H213 POV sing 421 n n 
C213 H21C POV sing 422 n n 
C313 C314 POV sing 423 n n 
C313 H313 POV sing 424 n n 
C313 H31D POV sing 425 n n 
C14 H14 POV sing 426 n n 
C14 H14A POV sing 427 n n 
C14 H14B POV sing 428 n n 
C214 C215 POV sing 429 n n 
C214 H214 POV sing 430 n n 
C214 H21D POV sing 431 n n 
C314 C315 POV sing 432 n n 
C314 H314 POV sing 433 n n 
C314 H31E POV sing 434 n n 
C15 H15 POV sing 435 n n 
C15 H15A POV sing 436 n n 
C15 H15B POV sing 437 n n 
C215 C216 POV sing 438 n n 
C215 H215 POV sing 439 n n 
C215 H21E POV sing 440 n n 
C315 C316 POV sing 441 n n 
C315 H315 POV sing 442 n n 
C315 H31F POV sing 443 n n 
C216 C217 POV sing 444 n n 
C216 H216 POV sing 445 n n 
C216 H21F POV sing 446 n n 
C316 H316 POV sing 447 n n 
C316 H31G POV sing 448 n n 
C316 H31H POV sing 449 n n 
C217 C218 POV sing 450 n n 
C217 H217 POV sing 451 n n 
C217 H21G POV sing 452 n n 
C218 H218 POV sing 453 n n 
C218 H21H POV sing 454 n n 
C218 H21J POV sing 455 n n 
C21 O21 POV sing 456 n n 
C21 C22 POV sing 457 n n 
C21 O22 POV doub 458 n n 
C22 C23 POV sing 459 n n 
C22 H22 POV sing 460 n n 
C22 H22A POV sing 461 n n 
C23 C24 POV sing 462 n n 
C23 H23 POV sing 463 n n 
C23 H23A POV sing 464 n n 
C24 C25 POV sing 465 n n 
C24 H24 POV sing 466 n n 
C24 H24A POV sing 467 n n 
C25 C26 POV sing 468 n n 
C25 H25 POV sing 469 n n 
C25 H25A POV sing 470 n n 
C26 C27 POV sing 471 n n 
C26 H26 POV sing 472 n n 
C26 H26A POV sing 473 n n 
C27 C28 POV sing 474 n n 
C27 H27 POV sing 475 n n 
C27 H27A POV sing 476 n n 
C28 C29 POV sing 477 n n 
C28 H28 POV sing 478 n n 
C28 H28A POV sing 479 n n 
C29 H29 POV sing 480 n n 
C31 O31 POV sing 481 n n 
C31 C32 POV sing 482 n n 
C31 O32 POV doub 483 n n 
C32 C33 POV sing 484 n n 
C32 H32 POV sing 485 n n 
C32 H32A POV sing 486 n n 
C33 C34 POV sing 487 n n 
C33 H33 POV sing 488 n n 
C33 H33A POV sing 489 n n 
C34 C35 POV sing 490 n n 
C34 H34 POV sing 491 n n 
C34 H34A POV sing 492 n n 
C35 C36 POV sing 493 n n 
C35 H35 POV sing 494 n n 
C35 H35A POV sing 495 n n 
C36 C37 POV sing 496 n n 
C36 H36 POV sing 497 n n 
C36 H36A POV sing 498 n n 
C37 C38 POV sing 499 n n 
C37 H37 POV sing 500 n n 
C37 H37A POV sing 501 n n 
C38 C39 POV sing 502 n n 
C38 H38 POV sing 503 n n 
C38 H38A POV sing 504 n n 
C39 H39 POV sing 505 n n 
C39 H39A POV sing 506 n n 
#
_atom_sites.entry_id                     8SZC 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 POV D 1 701 8 POV POV . 
D 3 POV D 1 702 10 POV POV . 
E 3 POV D 1 703 11 POV POV . 
F 3 POV D 1 704 12 POV POV . 
G 3 POV D 1 705 13 POV POV . 
H 3 POV D 1 706 14 POV POV . 
I 3 POV D 1 707 17 POV POV . 
J 3 POV D 1 708 18 POV POV . 
K 3 POV D 1 709 19 POV POV . 
L 3 POV D 1 710 20 POV POV . 
M 4 ATP D 1 711 1 ATP ATP . 
N 5 MG D 1 712 1 MG MG . 
O 3 POV C 1 601 -577 POV POV . 
P 3 POV C 1 602 1 POV POV . 
Q 3 POV C 1 603 2 POV POV . 
R 3 POV C 1 604 3 POV POV . 
S 3 POV C 1 605 4 POV POV . 
T 3 POV C 1 606 5 POV POV . 
U 3 POV C 1 607 6 POV POV . 
V 3 POV C 1 608 7 POV POV . 
W 3 POV C 1 609 9 POV POV . 
X 3 POV C 1 610 15 POV POV . 
Y 3 POV C 1 611 16 POV POV . 
Z 4 ATP C 1 612 2 ATP ATP . 
AA 6 HT1 C 1 613 3 HT1 HT1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 POV . . . S 3 187.323 169.218 198.155 1 43.51 ? C1 POV 605 C 1 
HETATM 2 C C2 POV . . . S 3 188.109 168.414 197.116 1 41.79 ? C2 POV 605 C 1 
HETATM 3 C C210 POV . . . S 3 184.07 173.499 186.713 1 44.96 ? C210 POV 605 C 1 
HETATM 4 O O11 POV . . . S 3 187.151 168.446 199.315 1 46.86 ? O11 POV 605 C 1 
HETATM 5 C C211 POV . . . S 3 183.888 174.731 185.822 1 44.9 ? C211 POV 605 C 1 
HETATM 6 C C212 POV . . . S 3 182.442 174.885 185.324 1 44.9 ? C212 POV 605 C 1 
HETATM 7 C C213 POV . . . S 3 182.377 175.762 184.066 1 46.47 ? C213 POV 605 C 1 
HETATM 8 C C214 POV . . . S 3 180.995 176.42 183.966 1 49.72 ? C214 POV 605 C 1 
HETATM 9 C C215 POV . . . S 3 180.996 177.407 182.799 1 49.36 ? C215 POV 605 C 1 
HETATM 10 C C216 POV . . . S 3 179.713 178.233 182.787 1 48.1 ? C216 POV 605 C 1 
HETATM 11 C C217 POV . . . S 3 179.892 179.41 181.828 1 48.06 ? C217 POV 605 C 1 
HETATM 12 C C218 POV . . . S 3 180.025 178.9 180.396 1 41.85 ? C218 POV 605 C 1 
HETATM 13 C C21 POV . . . S 3 187.191 169.258 195.134 1 49.59 ? C21 POV 605 C 1 
HETATM 14 O O21 POV . . . S 3 188.317 169.188 195.968 1 49.61 ? O21 POV 605 C 1 
HETATM 15 C C22 POV . . . S 3 187.136 170.264 193.969 1 39.99 ? C22 POV 605 C 1 
HETATM 16 O O22 POV . . . S 3 186.268 168.547 195.342 1 54.62 ? O22 POV 605 C 1 
HETATM 17 C C23 POV . . . S 3 188.053 169.831 192.818 1 37.57 ? C23 POV 605 C 1 
HETATM 18 C C24 POV . . . S 3 187.95 170.86 191.679 1 47.49 ? C24 POV 605 C 1 
HETATM 19 C C25 POV . . . S 3 186.692 170.63 190.823 1 49.42 ? C25 POV 605 C 1 
HETATM 20 C C26 POV . . . S 3 185.767 171.853 190.82 1 48.1 ? C26 POV 605 C 1 
HETATM 21 C C27 POV . . . S 3 184.906 171.842 189.55 1 45.52 ? C27 POV 605 C 1 
HETATM 22 C C28 POV . . . S 3 185.674 172.372 188.341 1 40.15 ? C28 POV 605 C 1 
HETATM 23 C C29 POV . . . S 3 185.039 173.691 187.886 1 42.44 ? C29 POV 605 C 1 
HETATM 24 H H29 POV . . . S 3 184.6 174.24 188.725 1 43.72 ? H29 POV 605 C 1 
HETATM 25 H H1 POV . . . S 3 187.869 170.123 198.402 1 43.6 ? H1 POV 605 C 1 
HETATM 26 H H1A POV . . . S 3 186.352 169.481 197.751 1 43.42 ? H1A POV 605 C 1 
HETATM 27 H H210 POV . . . S 3 184.438 172.7 186.073 1 43.78 ? H210 POV 605 C 1 
HETATM 28 H H211 POV . . . S 3 184.17 175.628 186.358 1 43.9 ? H211 POV 605 C 1 
HETATM 29 H H21A POV . . . S 3 184.546 174.603 184.971 1 43.13 ? H21A POV 605 C 1 
HETATM 30 H H22 POV . . . S 3 186.116 170.335 193.604 1 43.34 ? H22 POV 605 C 1 
HETATM 31 H H212 POV . . . S 3 182.034 173.91 185.084 1 43.3 ? H212 POV 605 C 1 
HETATM 32 H H22A POV . . . S 3 187.459 171.235 194.327 1 43.17 ? H22A POV 605 C 1 
HETATM 33 H H21B POV . . . S 3 181.833 175.343 186.099 1 43.3 ? H21B POV 605 C 1 
HETATM 34 H H23 POV . . . S 3 189.075 169.784 193.178 1 42.5 ? H23 POV 605 C 1 
HETATM 35 H H213 POV . . . S 3 183.141 176.53 184.108 1 44.11 ? H213 POV 605 C 1 
HETATM 36 H H23A POV . . . S 3 187.756 168.852 192.46 1 42.92 ? H23A POV 605 C 1 
HETATM 37 H H21C POV . . . S 3 182.538 175.151 183.184 1 43.46 ? H21C POV 605 C 1 
HETATM 38 H H24 POV . . . S 3 187.932 171.859 192.102 1 44.3 ? H24 POV 605 C 1 
HETATM 39 H H214 POV . . . S 3 180.238 175.662 183.799 1 44.51 ? H214 POV 605 C 1 
HETATM 40 H H24A POV . . . S 3 188.813 170.761 191.031 1 43.99 ? H24A POV 605 C 1 
HETATM 41 H H21D POV . . . S 3 180.78 176.954 184.887 1 43.27 ? H21D POV 605 C 1 
HETATM 42 H H25 POV . . . S 3 186.999 170.423 189.803 1 43.65 ? H25 POV 605 C 1 
HETATM 43 H H215 POV . . . S 3 181.841 178.077 182.904 1 44.08 ? H215 POV 605 C 1 
HETATM 44 H H25A POV . . . S 3 186.144 169.776 191.208 1 43.68 ? H25A POV 605 C 1 
HETATM 45 H H21E POV . . . S 3 181.084 176.856 181.868 1 43.65 ? H21E POV 605 C 1 
HETATM 46 H H26 POV . . . S 3 185.116 171.809 191.689 1 43.22 ? H26 POV 605 C 1 
HETATM 47 H H216 POV . . . S 3 178.883 177.619 182.458 1 44.11 ? H216 POV 605 C 1 
HETATM 48 H H26A POV . . . S 3 186.354 172.766 190.861 1 44.7 ? H26A POV 605 C 1 
HETATM 49 H H21F POV . . . S 3 179.514 178.607 183.786 1 42.87 ? H21F POV 605 C 1 
HETATM 50 H H27 POV . . . S 3 184.56 170.829 189.345 1 43.64 ? H27 POV 605 C 1 
HETATM 51 H H217 POV . . . S 3 179.033 180.064 181.891 1 43.57 ? H217 POV 605 C 1 
HETATM 52 H H27A POV . . . S 3 184.046 172.479 189.708 1 43.97 ? H27A POV 605 C 1 
HETATM 53 H H21G POV . . . S 3 180.785 179.963 182.102 1 43.93 ? H21G POV 605 C 1 
HETATM 54 H H28 POV . . . S 3 186.714 172.537 188.602 1 42.4 ? H28 POV 605 C 1 
HETATM 55 H H218 POV . . . S 3 180.01 179.74 179.708 1 42.56 ? H218 POV 605 C 1 
HETATM 56 H H28A POV . . . S 3 185.625 171.633 187.547 1 42.7 ? H28A POV 605 C 1 
HETATM 57 H H21H POV . . . S 3 180.962 178.364 180.285 1 42.81 ? H21H POV 605 C 1 
HETATM 58 H H21J POV . . . S 3 179.197 178.234 180.173 1 43.47 ? H21J POV 605 C 1 
#
_model_server_stats.io_time_ms              108 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           58 
#