data_8T0V
#
_model_server_result.job_id            brEjk7BR-9KaDyfAyMYl1Q 
_model_server_result.datetime_utc      '2024-10-10 05:19:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8t0v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":602}' 
#
_entry.id    8T0V 
#
_exptl.entry_id    8T0V 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              393.353 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-{2-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]ethyl}-L-cysteine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8T0V 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8T0V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NE2 
_struct_conn.ptnr1_label_comp_id            HIS 
_struct_conn.ptnr1_label_seq_id             133 
_struct_conn.ptnr1_auth_asym_id             B 
_struct_conn.ptnr1_auth_comp_id             HIS 
_struct_conn.ptnr1_auth_seq_id              133 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            E 
_struct_conn.ptnr2_label_atom_id            CO 
_struct_conn.ptnr2_label_comp_id            B12 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             B12 
_struct_conn.ptnr2_auth_seq_id              301 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.354 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C13 H20 N3 O7 P S' 
_chem_comp.formula_weight    393.353 
_chem_comp.id                X6I 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              S-{2-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]ethyl}-L-cysteine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O5 C12 X6I doub 597 n n 
N3 C11 X6I sing 598 n n 
C12 C11 X6I sing 599 n n 
C12 O6 X6I sing 600 n n 
C11 C10 X6I sing 601 n n 
C10 S1 X6I sing 602 n n 
S1 C9 X6I sing 603 n n 
C9 C8 X6I sing 604 n n 
C8 N2 X6I sing 605 n n 
N2 C7 X6I doub 606 n n 
O7 C13 X6I sing 607 n n 
C7 C6 X6I sing 608 n n 
C13 C6 X6I doub 609 n y 
C13 C2 X6I sing 610 n y 
C1 C2 X6I sing 611 n n 
C6 C4 X6I sing 612 n y 
C2 N1 X6I doub 613 n y 
C4 C5 X6I sing 614 n n 
C4 C3 X6I doub 615 n y 
C5 O1 X6I sing 616 n n 
N1 C3 X6I sing 617 n y 
O1 P1 X6I sing 618 n n 
O4 P1 X6I doub 619 n n 
P1 O3 X6I sing 620 n n 
P1 O2 X6I sing 621 n n 
C1 H3 X6I sing 622 n n 
C1 H2 X6I sing 623 n n 
C1 H1 X6I sing 624 n n 
C10 H12 X6I sing 625 n n 
C10 H13 X6I sing 626 n n 
C11 H14 X6I sing 627 n n 
C3 H4 X6I sing 628 n n 
C5 H5 X6I sing 629 n n 
C5 H6 X6I sing 630 n n 
C7 H7 X6I sing 631 n n 
C8 H9 X6I sing 632 n n 
C8 H8 X6I sing 633 n n 
C9 H11 X6I sing 634 n n 
C9 H10 X6I sing 635 n n 
N3 H17 X6I sing 636 n n 
N3 H15 X6I sing 637 n n 
O2 H22 X6I sing 638 n n 
O3 H23 X6I sing 639 n n 
O6 H24 X6I sing 640 n n 
O7 H18 X6I sing 641 n n 
#
_atom_sites.entry_id                     8T0V 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 B12 B 1 301 301 B12 B12 . 
F 4 5AD D 1 601 602 5AD 5AD . 
G 5 X6I D 1 602 701 X6I PTH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 X6I . . . G 5 135.884 141.027 159.348 1 24.55 ? C1 X6I 602 D 1 
HETATM 2 C C10 X6I . . . G 5 135.646 133.333 153.158 1 22.38 ? C10 X6I 602 D 1 
HETATM 3 C C11 X6I . . . G 5 135.783 133.697 151.684 1 24.37 ? C11 X6I 602 D 1 
HETATM 4 C C12 X6I . . . G 5 136.843 132.802 151.05 1 31.37 ? C12 X6I 602 D 1 
HETATM 5 C C13 X6I . . . G 5 136.834 138.776 158.997 1 24.14 ? C13 X6I 602 D 1 
HETATM 6 C C2 X6I . . . G 5 136.658 139.796 159.813 1 25.94 ? C2 X6I 602 D 1 
HETATM 7 C C3 X6I . . . G 5 137.863 138.727 161.585 1 21.37 ? C3 X6I 602 D 1 
HETATM 8 C C4 X6I . . . G 5 138.072 137.542 160.65 1 22.26 ? C4 X6I 602 D 1 
HETATM 9 C C5 X6I . . . G 5 138.85 136.322 161.142 1 21.38 ? C5 X6I 602 D 1 
HETATM 10 C C6 X6I . . . G 5 137.592 137.571 159.461 1 23.63 ? C6 X6I 602 D 1 
HETATM 11 C C7 X6I . . . G 5 137.821 136.369 158.545 1 25.97 ? C7 X6I 602 D 1 
HETATM 12 C C8 X6I . . . G 5 137.119 135.111 156.68 1 27.42 ? C8 X6I 602 D 1 
HETATM 13 C C9 X6I . . . G 5 136.128 135.04 155.524 1 26.87 ? C9 X6I 602 D 1 
HETATM 14 N N1 X6I . . . G 5 137.213 139.756 161.188 1 22.63 ? N1 X6I 602 D 1 
HETATM 15 N N2 X6I . . . G 5 136.879 136.32 157.444 1 27.32 ? N2 X6I 602 D 1 
HETATM 16 N N3 X6I . . . G 5 134.51 133.506 151.012 1 25.52 ? N3 X6I 602 D 1 
HETATM 17 O O1 X6I . . . G 5 137.994 135.218 161.234 1 15.84 ? O1 X6I 602 D 1 
HETATM 18 O O2 X6I . . . G 5 137.083 134.543 163.55 1 30.16 ? O2 X6I 602 D 1 
HETATM 19 O O3 X6I . . . G 5 139.503 134.356 163.151 1 24.74 ? O3 X6I 602 D 1 
HETATM 20 O O4 X6I . . . G 5 137.957 132.779 162.063 1 26.56 ? O4 X6I 602 D 1 
HETATM 21 O O5 X6I . . . G 5 136.844 132.608 149.807 1 27.03 ? O5 X6I 602 D 1 
HETATM 22 O O6 X6I . . . G 5 137.717 132.26 151.776 1 25.59 ? O6 X6I 602 D 1 
HETATM 23 O O7 X6I . . . G 5 136.302 138.837 157.704 1 23.84 ? O7 X6I 602 D 1 
HETATM 24 P P1 X6I . . . G 5 138.138 134.204 162.525 1 37.07 ? P1 X6I 602 D 1 
HETATM 25 S S1 X6I . . . G 5 136.913 134.211 154.114 1 36.63 ? S1 X6I 602 D 1 
HETATM 26 H H3 X6I . . . G 5 136.278 141.366 158.395 1 23.15 ? H3 X6I 602 D 1 
HETATM 27 H H2 X6I . . . G 5 135.987 141.818 160.085 1 21.46 ? H2 X6I 602 D 1 
HETATM 28 H H1 X6I . . . G 5 134.834 140.772 159.236 1 22.04 ? H1 X6I 602 D 1 
HETATM 29 H H12 X6I . . . G 5 135.772 132.262 153.283 1 23.71 ? H12 X6I 602 D 1 
HETATM 30 H H13 X6I . . . G 5 134.664 133.624 153.51 1 24.28 ? H13 X6I 602 D 1 
HETATM 31 H H14 X6I . . . G 5 136.086 134.733 151.595 1 21.98 ? H14 X6I 602 D 1 
HETATM 32 H H4 X6I . . . G 5 138.268 138.7 162.587 1 22.03 ? H4 X6I 602 D 1 
HETATM 33 H H5 X6I . . . G 5 139.265 136.537 162.121 1 22.92 ? H5 X6I 602 D 1 
HETATM 34 H H6 X6I . . . G 5 139.656 136.094 160.454 1 22.61 ? H6 X6I 602 D 1 
HETATM 35 H H7 X6I . . . G 5 138.831 136.398 158.156 1 22.77 ? H7 X6I 602 D 1 
HETATM 36 H H9 X6I . . . G 5 138.132 135.122 156.29 1 23.86 ? H9 X6I 602 D 1 
HETATM 37 H H8 X6I . . . G 5 136.988 134.246 157.322 1 23.26 ? H8 X6I 602 D 1 
HETATM 38 H H11 X6I . . . G 5 135.255 134.476 155.834 1 23.96 ? H11 X6I 602 D 1 
HETATM 39 H H10 X6I . . . G 5 135.83 136.043 155.237 1 23.14 ? H10 X6I 602 D 1 
HETATM 40 H H17 X6I . . . G 5 133.982 132.798 151.491 1 24.68 ? H17 X6I 602 D 1 
HETATM 41 H H15 X6I . . . G 5 134.672 133.22 150.062 1 23.93 ? H15 X6I 602 D 1 
HETATM 42 H H18 X6I . . . G 5 135.364 138.742 157.745 1 22.61 ? H18 X6I 602 D 1 
HETATM 43 H H16 X6I . . . G 5 133.995 134.369 151.018 1 22.64 ? H16 X6I 602 D 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           43 
#