data_8T1B # _model_server_result.job_id 85ht7L8xcrY6NTbk14fMgg _model_server_result.datetime_utc '2024-11-04 22:32:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t1b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1209}' # _entry.id 8T1B # _exptl.entry_id 8T1B _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 815.175 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2~{R})-2-[(~{Z})-hexadec-9-enoyl]oxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] (~{Z})-docos-13-enoate' _entity.pdbx_number_of_molecules 40 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8T1B _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T1B _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 O N N ? 2 P N N ? 2 V N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N ? 2 CA N N ? 2 DA N N ? 2 EA N N ? 2 GA N N ? 2 HA N N ? 2 JA N N ? 2 KA N N ? 2 LA N N ? 2 MA N N ? 2 NA N N ? 2 OA N N ? 2 PA N N ? 2 QA N N ? 2 SA N N ? 2 TA N N ? 2 VA N N ? 2 WA N N ? 2 XA N N ? 2 YA N N ? 2 ZA N N ? 2 AB N N ? 2 BB N N ? 2 CB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 639 A CYS 639 1_555 A SG CYS 660 A CYS 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 639 B CYS 639 1_555 B SG CYS 660 B CYS 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 C SG CYS 639 C CYS 639 1_555 C SG CYS 660 C CYS 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 D SG CYS 639 D CYS 639 1_555 D SG CYS 660 D CYS 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 U NA NA . A NA 1217 1_555 EB O HOH . A HOH 1310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc2 U NA NA . A NA 1217 1_555 EB O HOH . A HOH 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.183 ? metalc ? metalc3 U NA NA . A NA 1217 1_555 FB O HOH . B HOH 1310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc4 U NA NA . A NA 1217 1_555 FB O HOH . B HOH 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.099 ? metalc ? metalc5 U NA NA . A NA 1217 1_555 GB O HOH . C HOH 1308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc6 U NA NA . A NA 1217 1_555 GB O HOH . C HOH 1311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.159 ? metalc ? metalc7 U NA NA . A NA 1217 1_555 HB O HOH . D HOH 1310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? # _chem_comp.formula 'C46 H89 N O8 P 1' _chem_comp.formula_weight 815.175 _chem_comp.id 9ZR _chem_comp.mon_nstd_flag . _chem_comp.name '[(2~{R})-2-[(~{Z})-hexadec-9-enoyl]oxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] (~{Z})-docos-13-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8T1B _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 9ZR A 1 1201 901 9ZR POV . F 2 9ZR A 1 1202 902 9ZR POV . G 2 9ZR A 1 1203 904 9ZR POV . H 2 9ZR A 1 1204 905 9ZR POV . I 2 9ZR A 1 1205 906 9ZR POV . J 2 9ZR A 1 1206 908 9ZR POV . K 2 9ZR A 1 1207 909 9ZR POV . L 2 9ZR A 1 1208 910 9ZR POV . M 2 9ZR A 1 1209 912 9ZR POV . N 3 YJ0 A 1 1210 911 YJ0 GDN . O 2 9ZR A 1 1211 901 9ZR POV . P 2 9ZR A 1 1212 907 9ZR POV . Q 3 YJ0 A 1 1213 903 YJ0 GDN . R 4 NA A 1 1214 1 NA NA . S 4 NA A 1 1215 2 NA NA . T 4 NA A 1 1216 3 NA NA . U 4 NA A 1 1217 4 NA NA . V 2 9ZR B 1 1201 907 9ZR POV . W 3 YJ0 B 1 1202 903 YJ0 GDN . X 2 9ZR B 1 1203 902 9ZR POV . Y 2 9ZR B 1 1204 904 9ZR POV . Z 2 9ZR B 1 1205 905 9ZR POV . AA 2 9ZR B 1 1206 906 9ZR POV . BA 2 9ZR B 1 1207 908 9ZR POV . CA 2 9ZR B 1 1208 909 9ZR POV . DA 2 9ZR B 1 1209 910 9ZR POV . EA 2 9ZR B 1 1210 912 9ZR POV . FA 3 YJ0 B 1 1211 911 YJ0 GDN . GA 2 9ZR C 1 1201 901 9ZR POV . HA 2 9ZR C 1 1202 907 9ZR POV . IA 3 YJ0 C 1 1203 903 YJ0 GDN . JA 2 9ZR C 1 1204 902 9ZR POV . KA 2 9ZR C 1 1205 904 9ZR POV . LA 2 9ZR C 1 1206 905 9ZR POV . MA 2 9ZR C 1 1207 906 9ZR POV . NA 2 9ZR C 1 1208 908 9ZR POV . OA 2 9ZR C 1 1209 909 9ZR POV . PA 2 9ZR C 1 1210 910 9ZR POV . QA 2 9ZR C 1 1211 912 9ZR POV . RA 3 YJ0 C 1 1212 911 YJ0 GDN . SA 2 9ZR D 1 1201 901 9ZR POV . TA 2 9ZR D 1 1202 907 9ZR POV . UA 3 YJ0 D 1 1203 903 YJ0 GDN . VA 2 9ZR D 1 1204 902 9ZR POV . WA 2 9ZR D 1 1205 904 9ZR POV . XA 2 9ZR D 1 1206 905 9ZR POV . YA 2 9ZR D 1 1207 906 9ZR POV . ZA 2 9ZR D 1 1208 908 9ZR POV . AB 2 9ZR D 1 1209 909 9ZR POV . BB 2 9ZR D 1 1210 910 9ZR POV . CB 2 9ZR D 1 1211 912 9ZR POV . DB 3 YJ0 D 1 1212 911 YJ0 GDN . EB 5 HOH A 1 1301 932 HOH HOH . EB 5 HOH A 2 1302 936 HOH HOH . EB 5 HOH A 3 1303 925 HOH HOH . EB 5 HOH A 4 1304 933 HOH HOH . EB 5 HOH A 5 1305 931 HOH HOH . EB 5 HOH A 6 1306 926 HOH HOH . EB 5 HOH A 7 1307 924 HOH HOH . EB 5 HOH A 8 1308 934 HOH HOH . EB 5 HOH A 9 1309 930 HOH HOH . EB 5 HOH A 10 1310 922 HOH HOH . EB 5 HOH A 11 1311 921 HOH HOH . EB 5 HOH A 12 1312 929 HOH HOH . EB 5 HOH A 13 1313 923 HOH HOH . EB 5 HOH A 14 1314 935 HOH HOH . EB 5 HOH A 15 1315 937 HOH HOH . EB 5 HOH A 16 1316 927 HOH HOH . EB 5 HOH A 17 1317 928 HOH HOH . EB 5 HOH A 18 1318 938 HOH HOH . FB 5 HOH B 1 1301 932 HOH HOH . FB 5 HOH B 2 1302 936 HOH HOH . FB 5 HOH B 3 1303 933 HOH HOH . FB 5 HOH B 4 1304 924 HOH HOH . FB 5 HOH B 5 1305 931 HOH HOH . FB 5 HOH B 6 1306 926 HOH HOH . FB 5 HOH B 7 1307 934 HOH HOH . FB 5 HOH B 8 1308 930 HOH HOH . FB 5 HOH B 9 1309 925 HOH HOH . FB 5 HOH B 10 1310 922 HOH HOH . FB 5 HOH B 11 1311 921 HOH HOH . FB 5 HOH B 12 1312 929 HOH HOH . FB 5 HOH B 13 1313 923 HOH HOH . FB 5 HOH B 14 1314 937 HOH HOH . FB 5 HOH B 15 1315 935 HOH HOH . FB 5 HOH B 16 1316 927 HOH HOH . FB 5 HOH B 17 1317 928 HOH HOH . FB 5 HOH B 18 1318 938 HOH HOH . GB 5 HOH C 1 1301 932 HOH HOH . GB 5 HOH C 2 1302 936 HOH HOH . GB 5 HOH C 3 1303 933 HOH HOH . GB 5 HOH C 4 1304 924 HOH HOH . GB 5 HOH C 5 1305 931 HOH HOH . GB 5 HOH C 6 1306 926 HOH HOH . GB 5 HOH C 7 1307 934 HOH HOH . GB 5 HOH C 8 1308 922 HOH HOH . GB 5 HOH C 9 1309 925 HOH HOH . GB 5 HOH C 10 1310 930 HOH HOH . GB 5 HOH C 11 1311 921 HOH HOH . GB 5 HOH C 12 1312 929 HOH HOH . GB 5 HOH C 13 1313 923 HOH HOH . GB 5 HOH C 14 1314 935 HOH HOH . GB 5 HOH C 15 1315 927 HOH HOH . GB 5 HOH C 16 1316 937 HOH HOH . GB 5 HOH C 17 1317 928 HOH HOH . GB 5 HOH C 18 1318 938 HOH HOH . HB 5 HOH D 1 1301 932 HOH HOH . HB 5 HOH D 2 1302 936 HOH HOH . HB 5 HOH D 3 1303 933 HOH HOH . HB 5 HOH D 4 1304 924 HOH HOH . HB 5 HOH D 5 1305 931 HOH HOH . HB 5 HOH D 6 1306 926 HOH HOH . HB 5 HOH D 7 1307 934 HOH HOH . HB 5 HOH D 8 1308 930 HOH HOH . HB 5 HOH D 9 1309 925 HOH HOH . HB 5 HOH D 10 1310 922 HOH HOH . HB 5 HOH D 11 1311 921 HOH HOH . HB 5 HOH D 12 1312 929 HOH HOH . HB 5 HOH D 13 1313 923 HOH HOH . HB 5 HOH D 14 1314 935 HOH HOH . HB 5 HOH D 15 1315 927 HOH HOH . HB 5 HOH D 16 1316 937 HOH HOH . HB 5 HOH D 17 1317 928 HOH HOH . HB 5 HOH D 18 1318 938 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 9ZR . . . M 2 127.897 174.508 141.875 1 14 ? C11 9ZR 1209 A 1 HETATM 2 C C12 9ZR . . . M 2 127.526 174.59 143.348 1 14 ? C12 9ZR 1209 A 1 HETATM 3 C C13 9ZR . . . M 2 128.253 175.692 144.106 1 14 ? C13 9ZR 1209 A 1 HETATM 4 C C14 9ZR . . . M 2 129.574 175.288 144.756 1 14 ? C14 9ZR 1209 A 1 HETATM 5 C C15 9ZR . . . M 2 129.764 175.831 146.168 1 14 ? C15 9ZR 1209 A 1 HETATM 6 C C21 9ZR . . . M 2 126.297 175.936 151.121 1 14 ? C21 9ZR 1209 A 1 HETATM 7 C C22 9ZR . . . M 2 127.134 175.844 152.36 1 14 ? C22 9ZR 1209 A 1 HETATM 8 C C25 9ZR . . . M 2 127.17 176.347 154.681 1 14 ? C25 9ZR 1209 A 1 HETATM 9 C C26 9ZR . . . M 2 126.165 176.665 155.759 1 14 ? C26 9ZR 1209 A 1 HETATM 10 C C27 9ZR . . . M 2 126.638 177.81 156.614 1 14 ? C27 9ZR 1209 A 1 HETATM 11 O O31 9ZR . . . M 2 123.861 176.941 158.832 1 14 -1 O31 9ZR 1209 A 1 HETATM 12 O O32 9ZR . . . M 2 125.37 178.679 159.861 1 14 ? O32 9ZR 1209 A 1 HETATM 13 C C33 9ZR . . . M 2 126.643 179.346 160.041 1 14 ? C33 9ZR 1209 A 1 HETATM 14 C C34 9ZR . . . M 2 126.653 180.652 159.283 1 14 ? C34 9ZR 1209 A 1 HETATM 15 C C36 9ZR . . . M 2 127.859 182.683 158.655 1 14 ? C36 9ZR 1209 A 1 HETATM 16 C C37 9ZR . . . M 2 128.564 180.549 157.716 1 14 ? C37 9ZR 1209 A 1 HETATM 17 C C38 9ZR . . . M 2 128.983 181.049 160.067 1 14 ? C38 9ZR 1209 A 1 HETATM 18 C C16 9ZR . . . M 2 129.285 174.912 147.293 1 14 ? C16 9ZR 1209 A 1 HETATM 19 C C17 9ZR . . . M 2 127.86 174.384 147.166 1 14 ? C17 9ZR 1209 A 1 HETATM 20 C C18 9ZR . . . M 2 126.783 175.441 147.307 1 14 ? C18 9ZR 1209 A 1 HETATM 21 C C19 9ZR . . . M 2 126.108 175.471 148.663 1 14 ? C19 9ZR 1209 A 1 HETATM 22 C C20 9ZR . . . M 2 127.053 175.628 149.84 1 14 ? C20 9ZR 1209 A 1 HETATM 23 C C40 9ZR . . . M 2 125.258 174.448 156.459 1 14 ? C40 9ZR 1209 A 1 HETATM 24 C C42 9ZR . . . M 2 124.488 174.483 155.162 1 14 ? C42 9ZR 1209 A 1 HETATM 25 C C43 9ZR . . . M 2 123.709 173.195 154.935 1 14 ? C43 9ZR 1209 A 1 HETATM 26 C C44 9ZR . . . M 2 124.594 172.055 154.464 1 14 ? C44 9ZR 1209 A 1 HETATM 27 C C45 9ZR . . . M 2 124.395 171.664 153.001 1 14 ? C45 9ZR 1209 A 1 HETATM 28 C C46 9ZR . . . M 2 124.636 172.785 151.999 1 14 ? C46 9ZR 1209 A 1 HETATM 29 C C47 9ZR . . . M 2 124.354 172.395 150.557 1 14 ? C47 9ZR 1209 A 1 HETATM 30 C C48 9ZR . . . M 2 125.494 171.653 149.872 1 14 ? C48 9ZR 1209 A 1 HETATM 31 C C49 9ZR . . . M 2 125.123 171.152 148.513 1 14 ? C49 9ZR 1209 A 1 HETATM 32 C C50 9ZR . . . M 2 125.245 171.809 147.381 1 14 ? C50 9ZR 1209 A 1 HETATM 33 C C51 9ZR . . . M 2 124.868 171.316 146.02 1 14 ? C51 9ZR 1209 A 1 HETATM 34 C C52 9ZR . . . M 2 125.564 172.088 144.9 1 14 ? C52 9ZR 1209 A 1 HETATM 35 C C53 9ZR . . . M 2 124.909 171.929 143.54 1 14 ? C53 9ZR 1209 A 1 HETATM 36 C C54 9ZR . . . M 2 125.03 170.535 142.946 1 14 ? C54 9ZR 1209 A 1 HETATM 37 C C55 9ZR . . . M 2 125.944 170.451 141.736 1 14 ? C55 9ZR 1209 A 1 HETATM 38 C C56 9ZR . . . M 2 125.407 171.164 140.504 1 14 ? C56 9ZR 1209 A 1 HETATM 39 N N35 9ZR . . . M 2 128.015 181.222 158.937 1 14 1 N35 9ZR 1209 A 1 HETATM 40 O O23 9ZR . . . M 2 128.232 175.361 152.418 1 14 ? O23 9ZR 1209 A 1 HETATM 41 O O24 9ZR . . . M 2 126.495 176.374 153.404 1 14 ? O24 9ZR 1209 A 1 HETATM 42 O O28 9ZR . . . M 2 125.566 178.222 157.49 1 14 ? O28 9ZR 1209 A 1 HETATM 43 O O30 9ZR . . . M 2 126.363 176.515 159.137 1 14 ? O30 9ZR 1209 A 1 HETATM 44 O O39 9ZR . . . M 2 126.084 175.511 156.665 1 14 ? O39 9ZR 1209 A 1 HETATM 45 O O41 9ZR . . . M 2 125.144 173.547 157.246 1 14 ? O41 9ZR 1209 A 1 HETATM 46 P P29 9ZR . . . M 2 125.253 177.448 158.853 1 14 ? P29 9ZR 1209 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 46 #