data_8T1E
#
_model_server_result.job_id            hB2EAndAN8pPciMagaEjxg 
_model_server_result.datetime_utc      '2024-11-04 22:39:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8t1e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1204}' 
#
_entry.id    8T1E 
#
_exptl.entry_id    8T1E 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              815.175 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(2~{R})-2-[(~{Z})-hexadec-9-enoyl]oxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] (~{Z})-docos-13-enoate' 
_entity.pdbx_number_of_molecules    32 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8T1E 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8T1E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 L N N 
? 2 M N N 
? 2 R N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
? 2 Y N N 
? 2 AA N N 
? 2 BA N N 
? 2 DA N N 
? 2 EA N N 
? 2 FA N N 
? 2 GA N N 
? 2 HA N N 
? 2 IA N N 
? 2 KA N N 
? 2 LA N N 
? 2 MA N N 
? 2 OA N N 
? 2 PA N N 
? 2 QA N N 
? 2 RA N N 
? 2 SA N N 
? 2 TA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 639 A CYS 639 1_555 A SG CYS 660 A CYS 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
disulf ? disulf2 B SG CYS 639 B CYS 639 1_555 B SG CYS 660 B CYS 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
disulf ? disulf3 C SG CYS 639 C CYS 639 1_555 C SG CYS 660 C CYS 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
disulf ? disulf4 D SG CYS 639 D CYS 639 1_555 D SG CYS 660 D CYS 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
#
_chem_comp.formula           'C46 H89 N O8 P 1' 
_chem_comp.formula_weight    815.175 
_chem_comp.id                9ZR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(2~{R})-2-[(~{Z})-hexadec-9-enoyl]oxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] (~{Z})-docos-13-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C38 N35 9ZR sing 1 n n 
C37 N35 9ZR sing 2 n n 
N35 C34 9ZR sing 3 n n 
N35 C36 9ZR sing 4 n n 
O30 P29 9ZR doub 5 n n 
C33 C34 9ZR sing 6 n n 
C33 O32 9ZR sing 7 n n 
O31 P29 9ZR sing 8 n n 
O32 P29 9ZR sing 9 n n 
P29 O28 9ZR sing 10 n n 
O28 C27 9ZR sing 11 n n 
C27 C26 9ZR sing 12 n n 
C26 O39 9ZR sing 13 n n 
C26 C25 9ZR sing 14 n n 
O39 C40 9ZR sing 15 n n 
C43 C42 9ZR sing 16 n n 
C43 C44 9ZR sing 17 n n 
C40 C42 9ZR sing 18 n n 
C40 O41 9ZR doub 19 n n 
C25 O24 9ZR sing 20 n n 
C44 C45 9ZR sing 21 n n 
O24 C22 9ZR sing 22 n n 
C45 C46 9ZR sing 23 n n 
C46 C47 9ZR sing 24 n n 
C22 O23 9ZR doub 25 n n 
C22 C21 9ZR sing 26 n n 
C48 C47 9ZR sing 27 n n 
C48 C49 9ZR sing 28 n n 
C49 C50 9ZR doub 29 z n 
C51 C50 9ZR sing 30 n n 
C51 C52 9ZR sing 31 n n 
C21 C20 9ZR sing 32 n n 
C52 C53 9ZR sing 33 n n 
C20 C19 9ZR sing 34 n n 
C19 C18 9ZR sing 35 n n 
C53 C54 9ZR sing 36 n n 
C18 C17 9ZR sing 37 n n 
C54 C55 9ZR sing 38 n n 
C17 C16 9ZR sing 39 n n 
C55 C56 9ZR sing 40 n n 
C16 C15 9ZR sing 41 n n 
C15 C14 9ZR sing 42 n n 
C14 C13 9ZR sing 43 n n 
C13 C12 9ZR sing 44 n n 
C12 C11 9ZR sing 45 n n 
C1 C2 9ZR sing 46 n n 
C2 C3 9ZR sing 47 n n 
C11 C10 9ZR sing 48 n n 
C10 C9 9ZR doub 49 z n 
C3 C4 9ZR sing 50 n n 
C9 C8 9ZR sing 51 n n 
C4 C5 9ZR sing 52 n n 
C8 C7 9ZR sing 53 n n 
C5 C6 9ZR sing 54 n n 
C7 C6 9ZR sing 55 n n 
C1 H1 9ZR sing 56 n n 
C1 H2 9ZR sing 57 n n 
C1 H3 9ZR sing 58 n n 
C2 H4 9ZR sing 59 n n 
C2 H5 9ZR sing 60 n n 
C3 H6 9ZR sing 61 n n 
C3 H7 9ZR sing 62 n n 
C11 H8 9ZR sing 63 n n 
C11 H9 9ZR sing 64 n n 
C12 H10 9ZR sing 65 n n 
C12 H11 9ZR sing 66 n n 
C13 H12 9ZR sing 67 n n 
C13 H13 9ZR sing 68 n n 
C14 H14 9ZR sing 69 n n 
C14 H15 9ZR sing 70 n n 
C15 H16 9ZR sing 71 n n 
C15 H17 9ZR sing 72 n n 
C21 H18 9ZR sing 73 n n 
C21 H19 9ZR sing 74 n n 
C25 H20 9ZR sing 75 n n 
C25 H21 9ZR sing 76 n n 
C26 H22 9ZR sing 77 n n 
C27 H23 9ZR sing 78 n n 
C27 H24 9ZR sing 79 n n 
O31 H25 9ZR sing 80 n n 
C33 H26 9ZR sing 81 n n 
C33 H27 9ZR sing 82 n n 
C34 H28 9ZR sing 83 n n 
C34 H29 9ZR sing 84 n n 
C36 H30 9ZR sing 85 n n 
C36 H31 9ZR sing 86 n n 
C36 H32 9ZR sing 87 n n 
C37 H33 9ZR sing 88 n n 
C37 H34 9ZR sing 89 n n 
C37 H35 9ZR sing 90 n n 
C38 H36 9ZR sing 91 n n 
C38 H37 9ZR sing 92 n n 
C38 H38 9ZR sing 93 n n 
C10 H39 9ZR sing 94 n n 
C16 H40 9ZR sing 95 n n 
C16 H41 9ZR sing 96 n n 
C17 H42 9ZR sing 97 n n 
C17 H43 9ZR sing 98 n n 
C18 H44 9ZR sing 99 n n 
C18 H45 9ZR sing 100 n n 
C19 H46 9ZR sing 101 n n 
C19 H47 9ZR sing 102 n n 
C20 H48 9ZR sing 103 n n 
C20 H49 9ZR sing 104 n n 
C4 H50 9ZR sing 105 n n 
C4 H51 9ZR sing 106 n n 
C42 H52 9ZR sing 107 n n 
C42 H53 9ZR sing 108 n n 
C43 H54 9ZR sing 109 n n 
C43 H55 9ZR sing 110 n n 
C44 H56 9ZR sing 111 n n 
C44 H57 9ZR sing 112 n n 
C45 H58 9ZR sing 113 n n 
C45 H59 9ZR sing 114 n n 
C46 H60 9ZR sing 115 n n 
C46 H61 9ZR sing 116 n n 
C47 H62 9ZR sing 117 n n 
C47 H63 9ZR sing 118 n n 
C48 H64 9ZR sing 119 n n 
C48 H65 9ZR sing 120 n n 
C49 H66 9ZR sing 121 n n 
C5 H67 9ZR sing 122 n n 
C5 H68 9ZR sing 123 n n 
C50 H69 9ZR sing 124 n n 
C51 H70 9ZR sing 125 n n 
C51 H71 9ZR sing 126 n n 
C52 H72 9ZR sing 127 n n 
C52 H73 9ZR sing 128 n n 
C53 H74 9ZR sing 129 n n 
C53 H75 9ZR sing 130 n n 
C54 H76 9ZR sing 131 n n 
C54 H77 9ZR sing 132 n n 
C55 H78 9ZR sing 133 n n 
C55 H79 9ZR sing 134 n n 
C56 H80 9ZR sing 135 n n 
C56 H81 9ZR sing 136 n n 
C56 H82 9ZR sing 137 n n 
C6 H83 9ZR sing 138 n n 
C6 H84 9ZR sing 139 n n 
C7 H85 9ZR sing 140 n n 
C7 H86 9ZR sing 141 n n 
C8 H87 9ZR sing 142 n n 
C8 H88 9ZR sing 143 n n 
C9 H89 9ZR sing 144 n n 
#
_atom_sites.entry_id                     8T1E 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 9ZR A 1 1201 901 9ZR POV . 
F 2 9ZR A 1 1202 904 9ZR POV . 
G 2 9ZR A 1 1203 905 9ZR POV . 
H 2 9ZR A 1 1204 906 9ZR POV . 
I 2 9ZR A 1 1205 908 9ZR POV . 
J 2 9ZR A 1 1206 910 9ZR POV . 
K 3 YJ0 A 1 1207 911 YJ0 GDN . 
L 2 9ZR A 1 1208 909 9ZR POV . 
M 2 9ZR A 1 1209 907 9ZR POV . 
N 3 YJ0 A 1 1210 903 YJ0 GDN . 
O 4 NA A 1 1211 1 NA NA . 
P 4 NA A 1 1212 2 NA NA . 
Q 4 NA A 1 1213 4 NA NA . 
R 2 9ZR B 1 1201 907 9ZR POV . 
S 3 YJ0 B 1 1202 903 YJ0 GDN . 
T 2 9ZR B 1 1203 901 9ZR POV . 
U 2 9ZR B 1 1204 904 9ZR POV . 
V 2 9ZR B 1 1205 905 9ZR POV . 
W 2 9ZR B 1 1206 906 9ZR POV . 
X 2 9ZR B 1 1207 908 9ZR POV . 
Y 2 9ZR B 1 1208 910 9ZR POV . 
Z 3 YJ0 B 1 1209 911 YJ0 GDN . 
AA 2 9ZR B 1 1210 909 9ZR POV . 
BA 2 9ZR C 1 1201 907 9ZR POV . 
CA 3 YJ0 C 1 1202 903 YJ0 GDN . 
DA 2 9ZR C 1 1203 901 9ZR POV . 
EA 2 9ZR C 1 1204 904 9ZR POV . 
FA 2 9ZR C 1 1205 905 9ZR POV . 
GA 2 9ZR C 1 1206 906 9ZR POV . 
HA 2 9ZR C 1 1207 908 9ZR POV . 
IA 2 9ZR C 1 1208 910 9ZR POV . 
JA 3 YJ0 C 1 1209 911 YJ0 GDN . 
KA 2 9ZR C 1 1210 909 9ZR POV . 
LA 2 9ZR D 1 1201 909 9ZR POV . 
MA 2 9ZR D 1 1202 907 9ZR POV . 
NA 3 YJ0 D 1 1203 903 YJ0 GDN . 
OA 2 9ZR D 1 1204 901 9ZR POV . 
PA 2 9ZR D 1 1205 904 9ZR POV . 
QA 2 9ZR D 1 1206 905 9ZR POV . 
RA 2 9ZR D 1 1207 906 9ZR POV . 
SA 2 9ZR D 1 1208 908 9ZR POV . 
TA 2 9ZR D 1 1209 910 9ZR POV . 
UA 3 YJ0 D 1 1210 911 YJ0 GDN . 
VA 5 HOH A 1 1301 938 HOH HOH . 
VA 5 HOH A 2 1302 924 HOH HOH . 
VA 5 HOH A 3 1303 934 HOH HOH . 
VA 5 HOH A 4 1304 925 HOH HOH . 
VA 5 HOH A 5 1305 936 HOH HOH . 
VA 5 HOH A 6 1306 933 HOH HOH . 
VA 5 HOH A 7 1307 931 HOH HOH . 
VA 5 HOH A 8 1308 930 HOH HOH . 
VA 5 HOH A 9 1309 937 HOH HOH . 
WA 5 HOH B 1 1301 938 HOH HOH . 
WA 5 HOH B 2 1302 924 HOH HOH . 
WA 5 HOH B 3 1303 934 HOH HOH . 
WA 5 HOH B 4 1304 936 HOH HOH . 
WA 5 HOH B 5 1305 925 HOH HOH . 
WA 5 HOH B 6 1306 933 HOH HOH . 
WA 5 HOH B 7 1307 931 HOH HOH . 
WA 5 HOH B 8 1308 930 HOH HOH . 
WA 5 HOH B 9 1309 937 HOH HOH . 
XA 5 HOH C 1 1301 938 HOH HOH . 
XA 5 HOH C 2 1302 924 HOH HOH . 
XA 5 HOH C 3 1303 934 HOH HOH . 
XA 5 HOH C 4 1304 936 HOH HOH . 
XA 5 HOH C 5 1305 925 HOH HOH . 
XA 5 HOH C 6 1306 933 HOH HOH . 
XA 5 HOH C 7 1307 931 HOH HOH . 
XA 5 HOH C 8 1308 930 HOH HOH . 
XA 5 HOH C 9 1309 937 HOH HOH . 
YA 5 HOH D 1 1301 938 HOH HOH . 
YA 5 HOH D 2 1302 924 HOH HOH . 
YA 5 HOH D 3 1303 934 HOH HOH . 
YA 5 HOH D 4 1304 936 HOH HOH . 
YA 5 HOH D 5 1305 925 HOH HOH . 
YA 5 HOH D 6 1306 933 HOH HOH . 
YA 5 HOH D 7 1307 931 HOH HOH . 
YA 5 HOH D 8 1308 930 HOH HOH . 
YA 5 HOH D 9 1309 937 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C44 9ZR . . . H 2 91.255 95.204 99.249 1 68.7 ? C44 9ZR 1204 A 1 
HETATM 2 C C45 9ZR . . . H 2 90.378 95.686 100.394 1 68.7 ? C45 9ZR 1204 A 1 
HETATM 3 C C46 9ZR . . . H 2 90.526 97.165 100.704 1 68.7 ? C46 9ZR 1204 A 1 
HETATM 4 C C47 9ZR . . . H 2 91.738 97.519 101.551 1 68.7 ? C47 9ZR 1204 A 1 
HETATM 5 C C48 9ZR . . . H 2 92.184 98.97 101.4 1 68.7 ? C48 9ZR 1204 A 1 
HETATM 6 C C49 9ZR . . . H 2 93.18 99.375 102.427 1 68.7 ? C49 9ZR 1204 A 1 
HETATM 7 C C50 9ZR . . . H 2 93.165 100.474 103.143 1 68.7 ? C50 9ZR 1204 A 1 
HETATM 8 C C51 9ZR . . . H 2 94.182 100.864 104.16 1 68.7 ? C51 9ZR 1204 A 1 
HETATM 9 C C52 9ZR . . . H 2 95.231 101.793 103.585 1 68.7 ? C52 9ZR 1204 A 1 
HETATM 10 C C53 9ZR . . . H 2 96.354 102.102 104.554 1 68.7 ? C53 9ZR 1204 A 1 
HETATM 11 C C54 9ZR . . . H 2 97.414 103.023 103.992 1 68.7 ? C54 9ZR 1204 A 1 
HETATM 12 C C55 9ZR . . . H 2 96.904 104.389 103.595 1 68.7 ? C55 9ZR 1204 A 1 
HETATM 13 C C56 9ZR . . . H 2 96.707 104.519 102.084 1 68.7 ? C56 9ZR 1204 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           68 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           13 
#