data_8T1P # _model_server_result.job_id DxLd7lWPq0EYT59FZGKC1w _model_server_result.datetime_utc '2024-12-21 16:48:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t1p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":604}' # _entry.id 8T1P # _exptl.entry_id 8T1P _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 21 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8T1P _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T1P _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N ? 5 Q N N ? 5 R N N ? 5 S N N ? 5 T N N ? 5 U N N ? 5 V N N ? 5 W N N ? 5 X N N ? 5 Y N N ? 5 Z N N ? 5 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 400 C THR 378 1_555 D MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? metalc ? metalc2 A OE1 GLN 441 C GLN 419 1_555 D MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc3 C O3G ATP . C ATP 601 1_555 D MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc4 C O2B ATP . C ATP 601 1_555 D MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? metalc ? metalc5 B OG SER 470 D SER 470 1_555 P MG MG . D MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc6 O O3B AOV . D AOV 701 1_555 P MG MG . D MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 POV sing 358 n n N C13 POV sing 359 n n N C14 POV sing 360 n n N C15 POV sing 361 n n P O11 POV sing 362 n n P O12 POV sing 363 n n P O13 POV sing 364 n n P O14 POV doub 365 n n C1 C2 POV sing 366 n n C1 O11 POV sing 367 n n C1 H1 POV sing 368 n n C1 H1A POV sing 369 n n C2 C3 POV sing 370 n n C2 O21 POV sing 371 n n C2 H2 POV sing 372 n n C3 O31 POV sing 373 n n C3 H3 POV sing 374 n n C3 H3A POV sing 375 n n C210 C211 POV sing 376 n n C210 C29 POV doub 377 z n C210 H210 POV sing 378 n n C310 C311 POV sing 379 n n C310 C39 POV sing 380 n n C310 H310 POV sing 381 n n C310 H31A POV sing 382 n n C11 C12 POV sing 383 n n C11 O12 POV sing 384 n n C11 H11 POV sing 385 n n C11 H11A POV sing 386 n n C211 C212 POV sing 387 n n C211 H211 POV sing 388 n n C211 H21A POV sing 389 n n C311 C312 POV sing 390 n n C311 H311 POV sing 391 n n C311 H31B POV sing 392 n n C12 H12 POV sing 393 n n C12 H12A POV sing 394 n n C212 C213 POV sing 395 n n C212 H212 POV sing 396 n n C212 H21B POV sing 397 n n C312 C313 POV sing 398 n n C312 H312 POV sing 399 n n C312 H31C POV sing 400 n n C13 H13 POV sing 401 n n C13 H13A POV sing 402 n n C13 H13B POV sing 403 n n C213 C214 POV sing 404 n n C213 H213 POV sing 405 n n C213 H21C POV sing 406 n n C313 C314 POV sing 407 n n C313 H313 POV sing 408 n n C313 H31D POV sing 409 n n C14 H14 POV sing 410 n n C14 H14A POV sing 411 n n C14 H14B POV sing 412 n n C214 C215 POV sing 413 n n C214 H214 POV sing 414 n n C214 H21D POV sing 415 n n C314 C315 POV sing 416 n n C314 H314 POV sing 417 n n C314 H31E POV sing 418 n n C15 H15 POV sing 419 n n C15 H15A POV sing 420 n n C15 H15B POV sing 421 n n C215 C216 POV sing 422 n n C215 H215 POV sing 423 n n C215 H21E POV sing 424 n n C315 C316 POV sing 425 n n C315 H315 POV sing 426 n n C315 H31F POV sing 427 n n C216 C217 POV sing 428 n n C216 H216 POV sing 429 n n C216 H21F POV sing 430 n n C316 H316 POV sing 431 n n C316 H31G POV sing 432 n n C316 H31H POV sing 433 n n C217 C218 POV sing 434 n n C217 H217 POV sing 435 n n C217 H21G POV sing 436 n n C218 H218 POV sing 437 n n C218 H21H POV sing 438 n n C218 H21J POV sing 439 n n C21 O21 POV sing 440 n n C21 C22 POV sing 441 n n C21 O22 POV doub 442 n n C22 C23 POV sing 443 n n C22 H22 POV sing 444 n n C22 H22A POV sing 445 n n C23 C24 POV sing 446 n n C23 H23 POV sing 447 n n C23 H23A POV sing 448 n n C24 C25 POV sing 449 n n C24 H24 POV sing 450 n n C24 H24A POV sing 451 n n C25 C26 POV sing 452 n n C25 H25 POV sing 453 n n C25 H25A POV sing 454 n n C26 C27 POV sing 455 n n C26 H26 POV sing 456 n n C26 H26A POV sing 457 n n C27 C28 POV sing 458 n n C27 H27 POV sing 459 n n C27 H27A POV sing 460 n n C28 C29 POV sing 461 n n C28 H28 POV sing 462 n n C28 H28A POV sing 463 n n C29 H29 POV sing 464 n n C31 O31 POV sing 465 n n C31 C32 POV sing 466 n n C31 O32 POV doub 467 n n C32 C33 POV sing 468 n n C32 H32 POV sing 469 n n C32 H32A POV sing 470 n n C33 C34 POV sing 471 n n C33 H33 POV sing 472 n n C33 H33A POV sing 473 n n C34 C35 POV sing 474 n n C34 H34 POV sing 475 n n C34 H34A POV sing 476 n n C35 C36 POV sing 477 n n C35 H35 POV sing 478 n n C35 H35A POV sing 479 n n C36 C37 POV sing 480 n n C36 H36 POV sing 481 n n C36 H36A POV sing 482 n n C37 C38 POV sing 483 n n C37 H37 POV sing 484 n n C37 H37A POV sing 485 n n C38 C39 POV sing 486 n n C38 H38 POV sing 487 n n C38 H38A POV sing 488 n n C39 H39 POV sing 489 n n C39 H39A POV sing 490 n n # _atom_sites.entry_id 8T1P _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ATP C 1 601 2 ATP ATP . D 4 MG C 1 602 2 MG MG . E 5 POV C 1 603 1 POV POV . F 5 POV C 1 604 3 POV POV . G 5 POV C 1 605 5 POV POV . H 5 POV C 1 606 6 POV POV . I 5 POV C 1 607 7 POV POV . J 5 POV C 1 608 8 POV POV . K 5 POV C 1 609 9 POV POV . L 5 POV C 1 610 12 POV POV . M 5 POV C 1 611 13 POV POV . N 5 POV C 1 612 16 POV POV . O 6 AOV D 1 701 1 AOV AOV . P 4 MG D 1 702 1 MG MG . Q 5 POV D 1 703 2 POV POV . R 5 POV D 1 704 4 POV POV . S 5 POV D 1 705 10 POV POV . T 5 POV D 1 706 11 POV POV . U 5 POV D 1 707 14 POV POV . V 5 POV D 1 708 15 POV POV . W 5 POV D 1 709 17 POV POV . X 5 POV D 1 710 18 POV POV . Y 5 POV D 1 711 19 POV POV . Z 5 POV D 1 712 20 POV POV . AA 5 POV D 1 713 21 POV POV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P POV . . . F 5 176.07 152.894 158.164 1 95.07 ? P POV 604 C 1 HETATM 2 C C1 POV . . . F 5 177.98 152.301 159.89 1 77.72 ? C1 POV 604 C 1 HETATM 3 C C2 POV . . . F 5 178.426 152.562 161.309 1 79.1 ? C2 POV 604 C 1 HETATM 4 C C3 POV . . . F 5 179.142 151.376 161.912 1 76.81 ? C3 POV 604 C 1 HETATM 5 C C210 POV . . . F 5 173.792 155.063 171.521 1 81.28 ? C210 POV 604 C 1 HETATM 6 O O11 POV . . . F 5 176.816 153.11 159.57 1 83.89 ? O11 POV 604 C 1 HETATM 7 C C211 POV . . . F 5 172.632 154.184 171.175 1 78.69 ? C211 POV 604 C 1 HETATM 8 O O12 POV . . . F 5 177.043 153.642 157.129 1 82.41 ? O12 POV 604 C 1 HETATM 9 C C212 POV . . . F 5 172.035 154.474 169.839 1 80.92 ? C212 POV 604 C 1 HETATM 10 O O13 POV . . . F 5 174.77 153.648 158.19 1 82.33 ? O13 POV 604 C 1 HETATM 11 C C213 POV . . . F 5 170.586 154.048 169.714 1 80.29 ? C213 POV 604 C 1 HETATM 12 O O14 POV . . . F 5 176.08 151.43 157.827 1 78.04 ? O14 POV 604 C 1 HETATM 13 C C214 POV . . . F 5 170.171 153.693 168.316 1 78.8 ? C214 POV 604 C 1 HETATM 14 C C215 POV . . . F 5 168.706 153.415 168.166 1 77.83 ? C215 POV 604 C 1 HETATM 15 C C216 POV . . . F 5 167.836 154.646 168.205 1 81.05 ? C216 POV 604 C 1 HETATM 16 C C217 POV . . . F 5 167.855 155.489 166.957 1 80.1 ? C217 POV 604 C 1 HETATM 17 C C218 POV . . . F 5 166.883 156.64 166.989 1 75.92 ? C218 POV 604 C 1 HETATM 18 C C21 POV . . . F 5 177.401 153.482 163.297 1 80.87 ? C21 POV 604 C 1 HETATM 19 O O21 POV . . . F 5 177.248 152.895 162.097 1 80.43 ? O21 POV 604 C 1 HETATM 20 C C22 POV . . . F 5 176.115 154.088 163.786 1 81.02 ? C22 POV 604 C 1 HETATM 21 O O22 POV . . . F 5 178.439 153.504 163.9 1 79.21 ? O22 POV 604 C 1 HETATM 22 C C23 POV . . . F 5 176.251 154.843 165.075 1 82.45 ? C23 POV 604 C 1 HETATM 23 C C24 POV . . . F 5 175.01 155.656 165.405 1 82.83 ? C24 POV 604 C 1 HETATM 24 C C25 POV . . . F 5 175.141 156.562 166.609 1 79.94 ? C25 POV 604 C 1 HETATM 25 C C26 POV . . . F 5 174.758 155.926 167.926 1 78.73 ? C26 POV 604 C 1 HETATM 26 C C27 POV . . . F 5 175.872 155.124 168.584 1 78.48 ? C27 POV 604 C 1 HETATM 27 C C28 POV . . . F 5 175.44 154.319 169.768 1 76.51 ? C28 POV 604 C 1 HETATM 28 C C29 POV . . . F 5 174.947 155.151 170.908 1 79.23 ? C29 POV 604 C 1 HETATM 29 O O31 POV . . . F 5 180.274 151.85 162.67 1 78.5 ? O31 POV 604 C 1 HETATM 30 H H29 POV . . . F 5 175.627 155.92 171.272 1 79.23 ? H29 POV 604 C 1 HETATM 31 H H1 POV . . . F 5 178.79 152.529 159.199 1 77.72 ? H1 POV 604 C 1 HETATM 32 H H1A POV . . . F 5 177.743 151.246 159.765 1 77.72 ? H1A POV 604 C 1 HETATM 33 H H2 POV . . . F 5 179.138 153.386 161.308 1 79.1 ? H2 POV 604 C 1 HETATM 34 H H3 POV . . . F 5 178.466 150.815 162.556 1 76.81 ? H3 POV 604 C 1 HETATM 35 H H3A POV . . . F 5 179.472 150.696 161.128 1 76.81 ? H3A POV 604 C 1 HETATM 36 H H210 POV . . . F 5 173.661 155.709 172.388 1 81.28 ? H210 POV 604 C 1 HETATM 37 H H211 POV . . . F 5 172.956 153.145 171.2 1 78.69 ? H211 POV 604 C 1 HETATM 38 H H21A POV . . . F 5 171.863 154.296 171.938 1 78.69 ? H21A POV 604 C 1 HETATM 39 H H22 POV . . . F 5 175.728 154.76 163.022 1 81.02 ? H22 POV 604 C 1 HETATM 40 H H212 POV . . . F 5 172.108 155.543 169.643 1 80.92 ? H212 POV 604 C 1 HETATM 41 H H22A POV . . . F 5 175.378 153.297 163.916 1 81.02 ? H22A POV 604 C 1 HETATM 42 H H21B POV . . . F 5 172.62 153.969 169.072 1 80.92 ? H21B POV 604 C 1 HETATM 43 H H23 POV . . . F 5 176.448 154.141 165.884 1 82.45 ? H23 POV 604 C 1 HETATM 44 H H213 POV . . . F 5 170.414 153.19 170.362 1 80.29 ? H213 POV 604 C 1 HETATM 45 H H23A POV . . . F 5 177.111 155.508 165.014 1 82.45 ? H23A POV 604 C 1 HETATM 46 H H21C POV . . . F 5 169.949 154.853 170.077 1 80.29 ? H21C POV 604 C 1 HETATM 47 H H24 POV . . . F 5 174.751 156.263 164.539 1 82.83 ? H24 POV 604 C 1 HETATM 48 H H214 POV . . . F 5 170.445 154.509 167.649 1 78.8 ? H214 POV 604 C 1 HETATM 49 H H24A POV . . . F 5 174.18 154.971 165.573 1 82.83 ? H24A POV 604 C 1 HETATM 50 H H21D POV . . . F 5 170.731 152.816 167.994 1 78.8 ? H21D POV 604 C 1 HETATM 51 H H25 POV . . . F 5 176.172 156.908 166.675 1 79.94 ? H25 POV 604 C 1 HETATM 52 H H215 POV . . . F 5 168.541 152.897 167.222 1 77.83 ? H215 POV 604 C 1 HETATM 53 H H25A POV . . . F 5 174.519 157.442 166.453 1 79.94 ? H25A POV 604 C 1 HETATM 54 H H21E POV . . . F 5 168.393 152.738 168.96 1 77.83 ? H21E POV 604 C 1 HETATM 55 H H26 POV . . . F 5 174.435 156.707 168.612 1 78.73 ? H26 POV 604 C 1 HETATM 56 H H216 POV . . . F 5 166.81 154.339 168.4 1 81.05 ? H216 POV 604 C 1 HETATM 57 H H26A POV . . . F 5 173.903 155.272 167.764 1 78.73 ? H26A POV 604 C 1 HETATM 58 H H21F POV . . . F 5 168.148 155.264 169.045 1 81.05 ? H21F POV 604 C 1 HETATM 59 H H27 POV . . . F 5 176.306 154.453 167.844 1 78.48 ? H27 POV 604 C 1 HETATM 60 H H217 POV . . . F 5 168.861 155.879 166.808 1 80.1 ? H217 POV 604 C 1 HETATM 61 H H27A POV . . . F 5 176.66 155.808 168.894 1 78.48 ? H27A POV 604 C 1 HETATM 62 H H21G POV . . . F 5 167.628 154.857 166.099 1 80.1 ? H21G POV 604 C 1 HETATM 63 H H28 POV . . . F 5 174.651 153.633 169.462 1 76.51 ? H28 POV 604 C 1 HETATM 64 H H218 POV . . . F 5 166.96 157.195 166.055 1 75.92 ? H218 POV 604 C 1 HETATM 65 H H28A POV . . . F 5 176.277 153.711 170.108 1 76.51 ? H28A POV 604 C 1 HETATM 66 H H21H POV . . . F 5 165.874 156.248 167.106 1 75.92 ? H21H POV 604 C 1 HETATM 67 H H21J POV . . . F 5 167.129 157.289 167.828 1 75.92 ? H21J POV 604 C 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 50 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 67 #