data_8T1P # _model_server_result.job_id XQEhxthiNhLV2zMW3S66dQ _model_server_result.datetime_utc '2024-12-21 16:50:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t1p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":608}' # _entry.id 8T1P # _exptl.entry_id 8T1P _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 21 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8T1P _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8T1P _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N ? 5 Q N N ? 5 R N N ? 5 S N N ? 5 T N N ? 5 U N N ? 5 V N N ? 5 W N N ? 5 X N N ? 5 Y N N ? 5 Z N N ? 5 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 400 C THR 378 1_555 D MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? metalc ? metalc2 A OE1 GLN 441 C GLN 419 1_555 D MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc3 C O3G ATP . C ATP 601 1_555 D MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc4 C O2B ATP . C ATP 601 1_555 D MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? metalc ? metalc5 B OG SER 470 D SER 470 1_555 P MG MG . D MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc6 O O3B AOV . D AOV 701 1_555 P MG MG . D MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 POV sing 358 n n N C13 POV sing 359 n n N C14 POV sing 360 n n N C15 POV sing 361 n n P O11 POV sing 362 n n P O12 POV sing 363 n n P O13 POV sing 364 n n P O14 POV doub 365 n n C1 C2 POV sing 366 n n C1 O11 POV sing 367 n n C1 H1 POV sing 368 n n C1 H1A POV sing 369 n n C2 C3 POV sing 370 n n C2 O21 POV sing 371 n n C2 H2 POV sing 372 n n C3 O31 POV sing 373 n n C3 H3 POV sing 374 n n C3 H3A POV sing 375 n n C210 C211 POV sing 376 n n C210 C29 POV doub 377 z n C210 H210 POV sing 378 n n C310 C311 POV sing 379 n n C310 C39 POV sing 380 n n C310 H310 POV sing 381 n n C310 H31A POV sing 382 n n C11 C12 POV sing 383 n n C11 O12 POV sing 384 n n C11 H11 POV sing 385 n n C11 H11A POV sing 386 n n C211 C212 POV sing 387 n n C211 H211 POV sing 388 n n C211 H21A POV sing 389 n n C311 C312 POV sing 390 n n C311 H311 POV sing 391 n n C311 H31B POV sing 392 n n C12 H12 POV sing 393 n n C12 H12A POV sing 394 n n C212 C213 POV sing 395 n n C212 H212 POV sing 396 n n C212 H21B POV sing 397 n n C312 C313 POV sing 398 n n C312 H312 POV sing 399 n n C312 H31C POV sing 400 n n C13 H13 POV sing 401 n n C13 H13A POV sing 402 n n C13 H13B POV sing 403 n n C213 C214 POV sing 404 n n C213 H213 POV sing 405 n n C213 H21C POV sing 406 n n C313 C314 POV sing 407 n n C313 H313 POV sing 408 n n C313 H31D POV sing 409 n n C14 H14 POV sing 410 n n C14 H14A POV sing 411 n n C14 H14B POV sing 412 n n C214 C215 POV sing 413 n n C214 H214 POV sing 414 n n C214 H21D POV sing 415 n n C314 C315 POV sing 416 n n C314 H314 POV sing 417 n n C314 H31E POV sing 418 n n C15 H15 POV sing 419 n n C15 H15A POV sing 420 n n C15 H15B POV sing 421 n n C215 C216 POV sing 422 n n C215 H215 POV sing 423 n n C215 H21E POV sing 424 n n C315 C316 POV sing 425 n n C315 H315 POV sing 426 n n C315 H31F POV sing 427 n n C216 C217 POV sing 428 n n C216 H216 POV sing 429 n n C216 H21F POV sing 430 n n C316 H316 POV sing 431 n n C316 H31G POV sing 432 n n C316 H31H POV sing 433 n n C217 C218 POV sing 434 n n C217 H217 POV sing 435 n n C217 H21G POV sing 436 n n C218 H218 POV sing 437 n n C218 H21H POV sing 438 n n C218 H21J POV sing 439 n n C21 O21 POV sing 440 n n C21 C22 POV sing 441 n n C21 O22 POV doub 442 n n C22 C23 POV sing 443 n n C22 H22 POV sing 444 n n C22 H22A POV sing 445 n n C23 C24 POV sing 446 n n C23 H23 POV sing 447 n n C23 H23A POV sing 448 n n C24 C25 POV sing 449 n n C24 H24 POV sing 450 n n C24 H24A POV sing 451 n n C25 C26 POV sing 452 n n C25 H25 POV sing 453 n n C25 H25A POV sing 454 n n C26 C27 POV sing 455 n n C26 H26 POV sing 456 n n C26 H26A POV sing 457 n n C27 C28 POV sing 458 n n C27 H27 POV sing 459 n n C27 H27A POV sing 460 n n C28 C29 POV sing 461 n n C28 H28 POV sing 462 n n C28 H28A POV sing 463 n n C29 H29 POV sing 464 n n C31 O31 POV sing 465 n n C31 C32 POV sing 466 n n C31 O32 POV doub 467 n n C32 C33 POV sing 468 n n C32 H32 POV sing 469 n n C32 H32A POV sing 470 n n C33 C34 POV sing 471 n n C33 H33 POV sing 472 n n C33 H33A POV sing 473 n n C34 C35 POV sing 474 n n C34 H34 POV sing 475 n n C34 H34A POV sing 476 n n C35 C36 POV sing 477 n n C35 H35 POV sing 478 n n C35 H35A POV sing 479 n n C36 C37 POV sing 480 n n C36 H36 POV sing 481 n n C36 H36A POV sing 482 n n C37 C38 POV sing 483 n n C37 H37 POV sing 484 n n C37 H37A POV sing 485 n n C38 C39 POV sing 486 n n C38 H38 POV sing 487 n n C38 H38A POV sing 488 n n C39 H39 POV sing 489 n n C39 H39A POV sing 490 n n # _atom_sites.entry_id 8T1P _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ATP C 1 601 2 ATP ATP . D 4 MG C 1 602 2 MG MG . E 5 POV C 1 603 1 POV POV . F 5 POV C 1 604 3 POV POV . G 5 POV C 1 605 5 POV POV . H 5 POV C 1 606 6 POV POV . I 5 POV C 1 607 7 POV POV . J 5 POV C 1 608 8 POV POV . K 5 POV C 1 609 9 POV POV . L 5 POV C 1 610 12 POV POV . M 5 POV C 1 611 13 POV POV . N 5 POV C 1 612 16 POV POV . O 6 AOV D 1 701 1 AOV AOV . P 4 MG D 1 702 1 MG MG . Q 5 POV D 1 703 2 POV POV . R 5 POV D 1 704 4 POV POV . S 5 POV D 1 705 10 POV POV . T 5 POV D 1 706 11 POV POV . U 5 POV D 1 707 14 POV POV . V 5 POV D 1 708 15 POV POV . W 5 POV D 1 709 17 POV POV . X 5 POV D 1 710 18 POV POV . Y 5 POV D 1 711 19 POV POV . Z 5 POV D 1 712 20 POV POV . AA 5 POV D 1 713 21 POV POV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N POV . . . J 5 176.627 139.893 157.39 1 94.39 ? N POV 608 C 1 HETATM 2 P P POV . . . J 5 173.013 139.081 153.763 1 106.38 ? P POV 608 C 1 HETATM 3 C C1 POV . . . J 5 171.466 139.065 155.934 1 91.48 ? C1 POV 608 C 1 HETATM 4 C C2 POV . . . J 5 172.108 139.206 157.294 1 92.54 ? C2 POV 608 C 1 HETATM 5 C C3 POV . . . J 5 172.23 137.895 158.032 1 92.95 ? C3 POV 608 C 1 HETATM 6 C C210 POV . . . J 5 171.317 137.266 162.766 1 91.55 ? C210 POV 608 C 1 HETATM 7 C C11 POV . . . J 5 174.857 139.427 155.598 1 91.71 ? C11 POV 608 C 1 HETATM 8 O O11 POV . . . J 5 172.316 138.332 155.004 1 96.75 ? O11 POV 608 C 1 HETATM 9 C C211 POV . . . J 5 170.587 135.964 162.699 1 94.25 ? C211 POV 608 C 1 HETATM 10 C C12 POV . . . J 5 176.318 139.588 155.934 1 92.93 ? C12 POV 608 C 1 HETATM 11 O O12 POV . . . J 5 174.559 139.174 154.2 1 96.62 ? O12 POV 608 C 1 HETATM 12 C C212 POV . . . J 5 171.127 135.035 161.659 1 92.19 ? C212 POV 608 C 1 HETATM 13 C C13 POV . . . J 5 175.994 141.174 157.799 1 89.92 ? C13 POV 608 C 1 HETATM 14 O O13 POV . . . J 5 172.492 140.484 153.628 1 91.8 ? O13 POV 608 C 1 HETATM 15 C C213 POV . . . J 5 172.461 134.403 162.016 1 90.74 ? C213 POV 608 C 1 HETATM 16 C C14 POV . . . J 5 176.118 138.811 158.265 1 91.9 ? C14 POV 608 C 1 HETATM 17 O O14 POV . . . J 5 172.9 138.141 152.594 1 90.39 ? O14 POV 608 C 1 HETATM 18 C C15 POV . . . J 5 178.094 140.009 157.582 1 92.62 ? C15 POV 608 C 1 HETATM 19 C C21 POV . . . J 5 171.415 141.447 157.794 1 91.81 ? C21 POV 608 C 1 HETATM 20 O O21 POV . . . J 5 171.324 140.14 158.081 1 92.82 ? O21 POV 608 C 1 HETATM 21 C C22 POV . . . J 5 170.312 142.21 158.448 1 91.31 ? C22 POV 608 C 1 HETATM 22 O O22 POV . . . J 5 172.279 141.932 157.112 1 90.82 ? O22 POV 608 C 1 HETATM 23 C C23 POV . . . J 5 170.804 143.226 159.413 1 92.54 ? C23 POV 608 C 1 HETATM 24 C C24 POV . . . J 5 169.91 143.338 160.626 1 90.66 ? C24 POV 608 C 1 HETATM 25 C C25 POV . . . J 5 170.644 143.426 161.93 1 89.62 ? C25 POV 608 C 1 HETATM 26 C C26 POV . . . J 5 171.473 142.218 162.263 1 89.9 ? C26 POV 608 C 1 HETATM 27 C C27 POV . . . J 5 170.693 140.914 162.319 1 91.15 ? C27 POV 608 C 1 HETATM 28 C C28 POV . . . J 5 171.555 139.717 162.495 1 90.57 ? C28 POV 608 C 1 HETATM 29 C C29 POV . . . J 5 170.788 138.439 162.579 1 89.53 ? C29 POV 608 C 1 HETATM 30 C C31 POV . . . J 5 173.463 137.084 159.86 1 91.27 ? C31 POV 608 C 1 HETATM 31 O O31 POV . . . J 5 172.895 138.14 159.29 1 92.55 ? O31 POV 608 C 1 HETATM 32 O O32 POV . . . J 5 174.306 136.419 159.318 1 93.26 ? O32 POV 608 C 1 HETATM 33 H H29 POV . . . J 5 169.705 138.493 162.476 1 89.53 ? H29 POV 608 C 1 HETATM 34 H H1 POV . . . J 5 170.512 138.551 156.035 1 91.48 ? H1 POV 608 C 1 HETATM 35 H H1A POV . . . J 5 171.254 140.053 155.529 1 91.48 ? H1A POV 608 C 1 HETATM 36 H H2 POV . . . J 5 173.123 139.571 157.144 1 92.54 ? H2 POV 608 C 1 HETATM 37 H H3 POV . . . J 5 171.245 137.463 158.202 1 92.95 ? H3 POV 608 C 1 HETATM 38 H H3A POV . . . J 5 172.794 137.177 157.439 1 92.95 ? H3A POV 608 C 1 HETATM 39 H H210 POV . . . J 5 172.382 137.229 162.99 1 91.55 ? H210 POV 608 C 1 HETATM 40 H H11 POV . . . J 5 174.455 138.607 156.191 1 91.71 ? H11 POV 608 C 1 HETATM 41 H H11A POV . . . J 5 174.331 140.329 155.905 1 91.71 ? H11A POV 608 C 1 HETATM 42 H H211 POV . . . J 5 170.637 135.477 163.672 1 94.25 ? H211 POV 608 C 1 HETATM 43 H H21A POV . . . J 5 169.535 136.156 162.493 1 94.25 ? H21A POV 608 C 1 HETATM 44 H H12 POV . . . J 5 176.727 140.388 155.319 1 92.93 ? H12 POV 608 C 1 HETATM 45 H H12A POV . . . J 5 176.839 138.674 155.655 1 92.93 ? H12A POV 608 C 1 HETATM 46 H H22 POV . . . J 5 169.715 142.703 157.682 1 91.31 ? H22 POV 608 C 1 HETATM 47 H H212 POV . . . J 5 170.4 134.244 161.483 1 92.19 ? H212 POV 608 C 1 HETATM 48 H H22A POV . . . J 5 169.654 141.514 158.966 1 91.31 ? H22A POV 608 C 1 HETATM 49 H H21B POV . . . J 5 171.236 135.581 160.723 1 92.19 ? H21B POV 608 C 1 HETATM 50 H H13 POV . . . J 5 176.23 141.369 158.844 1 89.92 ? H13 POV 608 C 1 HETATM 51 H H13A POV . . . J 5 176.383 141.977 157.175 1 89.92 ? H13A POV 608 C 1 HETATM 52 H H13B POV . . . J 5 174.916 141.093 157.671 1 89.92 ? H13B POV 608 C 1 HETATM 53 H H23 POV . . . J 5 171.813 142.965 159.73 1 92.54 ? H23 POV 608 C 1 HETATM 54 H H23A POV . . . J 5 170.866 144.194 158.919 1 92.54 ? H23A POV 608 C 1 HETATM 55 H H14 POV . . . J 5 176.352 139.053 159.301 1 91.9 ? H14 POV 608 C 1 HETATM 56 H H14A POV . . . J 5 175.04 138.729 158.137 1 91.9 ? H14A POV 608 C 1 HETATM 57 H H14B POV . . . J 5 176.597 137.874 157.985 1 91.9 ? H14B POV 608 C 1 HETATM 58 H H24 POV . . . J 5 169.28 144.22 160.518 1 90.66 ? H24 POV 608 C 1 HETATM 59 H H24A POV . . . J 5 169.247 142.475 160.654 1 90.66 ? H24A POV 608 C 1 HETATM 60 H H15 POV . . . J 5 178.298 140.227 158.629 1 92.62 ? H15 POV 608 C 1 HETATM 61 H H15A POV . . . J 5 178.564 139.068 157.3 1 92.62 ? H15A POV 608 C 1 HETATM 62 H H15B POV . . . J 5 178.471 140.815 156.954 1 92.62 ? H15B POV 608 C 1 HETATM 63 H H25 POV . . . J 5 171.293 144.301 161.908 1 89.62 ? H25 POV 608 C 1 HETATM 64 H H25A POV . . . J 5 169.921 143.585 162.729 1 89.62 ? H25A POV 608 C 1 HETATM 65 H H26 POV . . . J 5 172.265 142.121 161.522 1 89.9 ? H26 POV 608 C 1 HETATM 66 H H26A POV . . . J 5 171.956 142.379 163.226 1 89.9 ? H26A POV 608 C 1 HETATM 67 H H27 POV . . . J 5 169.979 140.962 163.14 1 91.15 ? H27 POV 608 C 1 HETATM 68 H H27A POV . . . J 5 170.116 140.805 161.402 1 91.15 ? H27A POV 608 C 1 HETATM 69 H H28 POV . . . J 5 172.255 139.657 161.663 1 90.57 ? H28 POV 608 C 1 HETATM 70 H H28A POV . . . J 5 172.148 139.836 163.401 1 90.57 ? H28A POV 608 C 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 70 #