data_8T1R
#
_model_server_result.job_id            y8OsR_CFoFyH6Cj36DrtJg 
_model_server_result.datetime_utc      '2024-12-23 03:04:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8t1r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    8T1R 
#
_exptl.entry_id    8T1R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              404.243 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-5-yl]-~{N}-[3-(3-methoxyphenyl)phenyl]propanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8T1R 
_cell.length_a            58.803 
_cell.length_b            82.311 
_cell.length_c            102.784 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8T1R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 91 A HIS 71 1_555 D FE FE . A FE 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? 
metalc ? metalc2 A ND1 HIS 93 A HIS 73 1_555 D FE FE . A FE 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc3 A OD2 ASP 95 A ASP 75 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc4 A NE2 HIS 96 A HIS 76 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? 
metalc ? metalc5 A NE2 HIS 178 A HIS 158 1_555 D FE FE . A FE 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc6 A OD2 ASP 199 A ASP 179 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc7 A OD2 ASP 199 A ASP 179 1_555 D FE FE . A FE 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? 
metalc ? metalc8 A NE2 HIS 438 A HIS 418 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc9 B O3 XZC . A XZC 501 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? 
metalc ? metalc10 B O2 XZC . A XZC 501 1_555 C FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc11 B O1 XZC . A XZC 501 1_555 D FE FE . A FE 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc12 B O2 XZC . A XZC 501 1_555 D FE FE . A FE 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
#
_chem_comp.formula           'C23 H23 B N O5 -1' 
_chem_comp.formula_weight    404.243 
_chem_comp.id                XZC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-5-yl]-~{N}-[3-(3-methoxyphenyl)phenyl]propanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O XZC sing 380 n n 
C2 C3 XZC doub 381 n y 
C2 C1 XZC sing 382 n y 
C3 C4 XZC sing 383 n y 
O C1 XZC sing 384 n n 
C1 C22 XZC doub 385 n y 
C4 C5 XZC doub 386 n y 
C22 C5 XZC sing 387 n y 
C5 C6 XZC sing 388 n n 
C6 C21 XZC doub 389 n y 
C6 C7 XZC sing 390 n y 
C21 C10 XZC sing 391 n y 
C7 C8 XZC doub 392 n y 
C10 N XZC sing 393 n n 
C10 C9 XZC doub 394 n y 
C8 C9 XZC sing 395 n y 
N C11 XZC sing 396 n n 
C19 C20 XZC doub 397 n y 
C19 C18 XZC sing 398 n y 
C11 C12 XZC sing 399 n n 
C11 O4 XZC doub 400 n n 
C20 C14 XZC sing 401 n y 
C12 C13 XZC sing 402 n n 
C18 C17 XZC doub 403 n y 
C14 C13 XZC sing 404 n n 
C14 C15 XZC doub 405 n y 
C17 C15 XZC sing 406 n y 
C17 C16 XZC sing 407 n n 
C15 B XZC sing 408 n n 
C16 O3 XZC sing 409 n n 
B O2 XZC sing 410 n n 
B O3 XZC sing 411 n n 
B O1 XZC sing 412 n n 
C7 H1 XZC sing 413 n n 
C8 H2 XZC sing 414 n n 
C9 H3 XZC sing 415 n n 
O1 H4 XZC sing 416 n n 
C4 H5 XZC sing 417 n n 
C3 H6 XZC sing 418 n n 
C2 H7 XZC sing 419 n n 
N H8 XZC sing 420 n n 
C H9 XZC sing 421 n n 
C H10 XZC sing 422 n n 
C H11 XZC sing 423 n n 
C12 H12 XZC sing 424 n n 
C12 H13 XZC sing 425 n n 
C13 H14 XZC sing 426 n n 
C13 H15 XZC sing 427 n n 
C16 H16 XZC sing 428 n n 
C16 H17 XZC sing 429 n n 
C18 H18 XZC sing 430 n n 
C19 H19 XZC sing 431 n n 
C20 H20 XZC sing 432 n n 
C21 H21 XZC sing 433 n n 
C22 H22 XZC sing 434 n n 
O2 H23 XZC sing 435 n n 
#
_atom_sites.entry_id                     8T1R 
_atom_sites.fract_transf_matrix[1][1]    0.017006 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012149 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009729 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 XZC A 1 501 501 XZC XXX . 
C 3 FE A 1 502 1 FE FE . 
D 3 FE A 1 503 2 FE FE . 
E 4 SO4 A 1 504 1 SO4 SO4 . 
F 5 CL A 1 505 1 CL CL . 
G 5 CL A 1 506 2 CL CL . 
H 6 HOH A 1 601 37 HOH HOH . 
H 6 HOH A 2 602 46 HOH HOH . 
H 6 HOH A 3 603 12 HOH HOH . 
H 6 HOH A 4 604 36 HOH HOH . 
H 6 HOH A 5 605 19 HOH HOH . 
H 6 HOH A 6 606 44 HOH HOH . 
H 6 HOH A 7 607 17 HOH HOH . 
H 6 HOH A 8 608 1 HOH HOH . 
H 6 HOH A 9 609 53 HOH HOH . 
H 6 HOH A 10 610 101 HOH HOH . 
H 6 HOH A 11 611 24 HOH HOH . 
H 6 HOH A 12 612 97 HOH HOH . 
H 6 HOH A 13 613 100 HOH HOH . 
H 6 HOH A 14 614 29 HOH HOH . 
H 6 HOH A 15 615 13 HOH HOH . 
H 6 HOH A 16 616 74 HOH HOH . 
H 6 HOH A 17 617 45 HOH HOH . 
H 6 HOH A 18 618 42 HOH HOH . 
H 6 HOH A 19 619 18 HOH HOH . 
H 6 HOH A 20 620 83 HOH HOH . 
H 6 HOH A 21 621 5 HOH HOH . 
H 6 HOH A 22 622 99 HOH HOH . 
H 6 HOH A 23 623 16 HOH HOH . 
H 6 HOH A 24 624 79 HOH HOH . 
H 6 HOH A 25 625 58 HOH HOH . 
H 6 HOH A 26 626 25 HOH HOH . 
H 6 HOH A 27 627 72 HOH HOH . 
H 6 HOH A 28 628 9 HOH HOH . 
H 6 HOH A 29 629 102 HOH HOH . 
H 6 HOH A 30 630 84 HOH HOH . 
H 6 HOH A 31 631 10 HOH HOH . 
H 6 HOH A 32 632 35 HOH HOH . 
H 6 HOH A 33 633 64 HOH HOH . 
H 6 HOH A 34 634 68 HOH HOH . 
H 6 HOH A 35 635 77 HOH HOH . 
H 6 HOH A 36 636 6 HOH HOH . 
H 6 HOH A 37 637 38 HOH HOH . 
H 6 HOH A 38 638 22 HOH HOH . 
H 6 HOH A 39 639 2 HOH HOH . 
H 6 HOH A 40 640 20 HOH HOH . 
H 6 HOH A 41 641 39 HOH HOH . 
H 6 HOH A 42 642 88 HOH HOH . 
H 6 HOH A 43 643 49 HOH HOH . 
H 6 HOH A 44 644 71 HOH HOH . 
H 6 HOH A 45 645 4 HOH HOH . 
H 6 HOH A 46 646 15 HOH HOH . 
H 6 HOH A 47 647 3 HOH HOH . 
H 6 HOH A 48 648 14 HOH HOH . 
H 6 HOH A 49 649 103 HOH HOH . 
H 6 HOH A 50 650 86 HOH HOH . 
H 6 HOH A 51 651 80 HOH HOH . 
H 6 HOH A 52 652 41 HOH HOH . 
H 6 HOH A 53 653 30 HOH HOH . 
H 6 HOH A 54 654 11 HOH HOH . 
H 6 HOH A 55 655 55 HOH HOH . 
H 6 HOH A 56 656 27 HOH HOH . 
H 6 HOH A 57 657 61 HOH HOH . 
H 6 HOH A 58 658 7 HOH HOH . 
H 6 HOH A 59 659 48 HOH HOH . 
H 6 HOH A 60 660 8 HOH HOH . 
H 6 HOH A 61 661 98 HOH HOH . 
H 6 HOH A 62 662 54 HOH HOH . 
H 6 HOH A 63 663 91 HOH HOH . 
H 6 HOH A 64 664 92 HOH HOH . 
H 6 HOH A 65 665 96 HOH HOH . 
H 6 HOH A 66 666 40 HOH HOH . 
H 6 HOH A 67 667 82 HOH HOH . 
H 6 HOH A 68 668 50 HOH HOH . 
H 6 HOH A 69 669 51 HOH HOH . 
H 6 HOH A 70 670 63 HOH HOH . 
H 6 HOH A 71 671 32 HOH HOH . 
H 6 HOH A 72 672 85 HOH HOH . 
H 6 HOH A 73 673 70 HOH HOH . 
H 6 HOH A 74 674 67 HOH HOH . 
H 6 HOH A 75 675 52 HOH HOH . 
H 6 HOH A 76 676 81 HOH HOH . 
H 6 HOH A 77 677 31 HOH HOH . 
H 6 HOH A 78 678 21 HOH HOH . 
H 6 HOH A 79 679 57 HOH HOH . 
H 6 HOH A 80 680 60 HOH HOH . 
H 6 HOH A 81 681 59 HOH HOH . 
H 6 HOH A 82 682 95 HOH HOH . 
H 6 HOH A 83 683 75 HOH HOH . 
H 6 HOH A 84 684 65 HOH HOH . 
H 6 HOH A 85 685 56 HOH HOH . 
H 6 HOH A 86 686 26 HOH HOH . 
H 6 HOH A 87 687 94 HOH HOH . 
H 6 HOH A 88 688 28 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C7 XZC . . . B 2 -30.099 3.549 -0.128 1 44.74 ? C7 XZC 501 A 1 
HETATM 2 C C8 XZC . . . B 2 -30.253 2.986 1.129 1 46.93 ? C8 XZC 501 A 1 
HETATM 3 C C9 XZC . . . B 2 -29.305 2.106 1.625 1 54.54 ? C9 XZC 501 A 1 
HETATM 4 O O1 XZC . . . B 2 -26.349 -2.506 7.138 1 33.74 ? O1 XZC 501 A 1 
HETATM 5 C C1 XZC . . . B 2 -27.384 4.789 -3.957 1 56.71 ? C1 XZC 501 A 1 
HETATM 6 C C5 XZC . . . B 2 -28.813 3.844 -2.26 1 61.98 ? C5 XZC 501 A 1 
HETATM 7 C C6 XZC . . . B 2 -28.991 3.241 -0.915 1 49 ? C6 XZC 501 A 1 
HETATM 8 C C4 XZC . . . B 2 -29.899 4.024 -3.117 1 56.66 ? C4 XZC 501 A 1 
HETATM 9 O O4 XZC . . . B 2 -26.738 1.825 3.37 1 55.11 ? O4 XZC 501 A 1 
HETATM 10 C C3 XZC . . . B 2 -29.725 4.577 -4.374 1 64.91 ? C3 XZC 501 A 1 
HETATM 11 O O3 XZC . . . B 2 -28.681 -2.786 7.124 1 42.43 ? O3 XZC 501 A 1 
HETATM 12 C C2 XZC . . . B 2 -28.467 4.962 -4.804 1 55.41 ? C2 XZC 501 A 1 
HETATM 13 N N XZC . . . B 2 -27.211 0.893 1.346 1 47.16 ? N XZC 501 A 1 
HETATM 14 C C XZC . . . B 2 -25.844 5.224 -5.732 1 69.15 ? C XZC 501 A 1 
HETATM 15 O O XZC . . . B 2 -26.123 5.164 -4.336 1 68.68 ? O XZC 501 A 1 
HETATM 16 B B XZC . . . B 2 -27.601 -1.96 6.579 1 42.25 ? B XZC 501 A 1 
HETATM 17 C C10 XZC . . . B 2 -28.192 1.787 0.856 1 53.57 ? C10 XZC 501 A 1 
HETATM 18 C C11 XZC . . . B 2 -26.544 0.96 2.52 1 54.17 ? C11 XZC 501 A 1 
HETATM 19 C C12 XZC . . . B 2 -25.515 -0.127 2.714 1 40.01 ? C12 XZC 501 A 1 
HETATM 20 C C13 XZC . . . B 2 -25.786 -0.986 3.953 1 39.72 ? C13 XZC 501 A 1 
HETATM 21 C C14 XZC . . . B 2 -27.055 -1.8 3.827 1 48.16 ? C14 XZC 501 A 1 
HETATM 22 C C15 XZC . . . B 2 -27.79 -2.161 4.969 1 43.87 ? C15 XZC 501 A 1 
HETATM 23 C C16 XZC . . . B 2 -29.63 -3.168 6.1 1 38.63 ? C16 XZC 501 A 1 
HETATM 24 C C17 XZC . . . B 2 -28.957 -2.896 4.789 1 53.19 ? C17 XZC 501 A 1 
HETATM 25 C C18 XZC . . . B 2 -29.4 -3.288 3.532 1 43.43 ? C18 XZC 501 A 1 
HETATM 26 C C19 XZC . . . B 2 -28.661 -2.934 2.416 1 46.23 ? C19 XZC 501 A 1 
HETATM 27 C C20 XZC . . . B 2 -27.499 -2.193 2.564 1 52.98 ? C20 XZC 501 A 1 
HETATM 28 C C21 XZC . . . B 2 -28.043 2.353 -0.405 1 50.14 ? C21 XZC 501 A 1 
HETATM 29 C C22 XZC . . . B 2 -27.546 4.236 -2.695 1 58.65 ? C22 XZC 501 A 1 
HETATM 30 O O2 XZC . . . B 2 -27.698 -0.571 7.08 1 34.63 ? O2 XZC 501 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           30 
#