data_8T3K
#
_model_server_result.job_id            HEdTrpQNR8DLN2waVfGZBA 
_model_server_result.datetime_utc      '2024-12-18 20:52:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8t3k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":708}' 
#
_entry.id    8T3K 
#
_exptl.entry_id    8T3K 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8T3K 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8T3K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 Q N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     8T3K 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 POV D 1 701 4 POV POV . 
D 3 POV D 1 702 5 POV POV . 
E 3 POV D 1 703 7 POV POV . 
F 3 POV D 1 704 8 POV POV . 
G 3 POV D 1 705 9 POV POV . 
H 3 POV D 1 706 10 POV POV . 
I 3 POV D 1 707 11 POV POV . 
J 4 ATP D 1 708 1 ATP ATP . 
K 3 POV C 1 601 1 POV POV . 
L 3 POV C 1 602 2 POV POV . 
M 3 POV C 1 603 3 POV POV . 
N 3 POV C 1 604 6 POV POV . 
O 3 POV C 1 605 12 POV POV . 
P 3 POV C 1 606 13 POV POV . 
Q 4 ATP C 1 607 2 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . J 4 164.191 158.21 208.899 1 73.87 ? PG ATP 708 D 1 
HETATM 2 O O1G ATP . . . J 4 164.165 159.126 207.724 1 73.87 ? O1G ATP 708 D 1 
HETATM 3 O O2G ATP . . . J 4 163.893 158.906 210.229 1 73.87 ? O2G ATP 708 D 1 
HETATM 4 O O3G ATP . . . J 4 163.268 156.998 208.752 1 73.87 ? O3G ATP 708 D 1 
HETATM 5 P PB ATP . . . J 4 166.332 156.178 209.341 1 73.87 ? PB ATP 708 D 1 
HETATM 6 O O1B ATP . . . J 4 165.417 155.071 209.008 1 73.87 ? O1B ATP 708 D 1 
HETATM 7 O O2B ATP . . . J 4 166.865 156.185 210.77 1 73.87 ? O2B ATP 708 D 1 
HETATM 8 O O3B ATP . . . J 4 165.646 157.583 209.09 1 73.87 ? O3B ATP 708 D 1 
HETATM 9 P PA ATP . . . J 4 168.21 155.342 207.215 1 73.87 ? PA ATP 708 D 1 
HETATM 10 O O1A ATP . . . J 4 168.528 153.986 207.706 1 73.87 ? O1A ATP 708 D 1 
HETATM 11 O O2A ATP . . . J 4 167.24 155.393 206.038 1 73.87 ? O2A ATP 708 D 1 
HETATM 12 O O3A ATP . . . J 4 167.59 156.243 208.369 1 73.87 ? O3A ATP 708 D 1 
HETATM 13 O O5' ATP . . . J 4 169.528 156.113 206.812 1 73.87 ? O5' ATP 708 D 1 
HETATM 14 C C5' ATP . . . J 4 170.674 156.136 207.687 1 73.87 ? C5' ATP 708 D 1 
HETATM 15 C C4' ATP . . . J 4 171.92 156.452 206.901 1 73.87 ? C4' ATP 708 D 1 
HETATM 16 O O4' ATP . . . J 4 171.789 155.796 205.619 1 73.87 ? O4' ATP 708 D 1 
HETATM 17 C C3' ATP . . . J 4 172.005 157.946 206.577 1 73.87 ? C3' ATP 708 D 1 
HETATM 18 O O3' ATP . . . J 4 173.393 158.226 206.463 1 73.87 ? O3' ATP 708 D 1 
HETATM 19 C C2' ATP . . . J 4 171.46 158.017 205.152 1 73.87 ? C2' ATP 708 D 1 
HETATM 20 O O2' ATP . . . J 4 172.19 159.046 204.5 1 73.87 ? O2' ATP 708 D 1 
HETATM 21 C C1' ATP . . . J 4 172.05 156.731 204.601 1 73.87 ? C1' ATP 708 D 1 
HETATM 22 N N9 ATP . . . J 4 171.351 156.274 203.407 1 73.87 ? N9 ATP 708 D 1 
HETATM 23 C C8 ATP . . . J 4 170.029 155.931 203.293 1 73.87 ? C8 ATP 708 D 1 
HETATM 24 N N7 ATP . . . J 4 169.677 155.555 202.088 1 73.87 ? N7 ATP 708 D 1 
HETATM 25 C C5 ATP . . . J 4 170.85 155.658 201.356 1 73.87 ? C5 ATP 708 D 1 
HETATM 26 C C6 ATP . . . J 4 171.153 155.402 200.006 1 73.87 ? C6 ATP 708 D 1 
HETATM 27 N N6 ATP . . . J 4 170.258 154.972 199.111 1 73.87 ? N6 ATP 708 D 1 
HETATM 28 N N1 ATP . . . J 4 172.425 155.608 199.597 1 73.87 ? N1 ATP 708 D 1 
HETATM 29 C C2 ATP . . . J 4 173.323 156.039 200.486 1 73.87 ? C2 ATP 708 D 1 
HETATM 30 N N3 ATP . . . J 4 173.154 156.313 201.781 1 73.87 ? N3 ATP 708 D 1 
HETATM 31 C C4 ATP . . . J 4 171.889 156.101 202.157 1 73.87 ? C4 ATP 708 D 1 
HETATM 32 H "H5'1" ATP . . . J 4 170.529 156.881 208.468 1 73.87 ? "H5'1" ATP 708 D 1 
HETATM 33 H "H5'2" ATP . . . J 4 170.782 155.172 208.182 1 73.87 ? "H5'2" ATP 708 D 1 
HETATM 34 H H4' ATP . . . J 4 172.787 156.138 207.481 1 73.87 ? H4' ATP 708 D 1 
HETATM 35 H H3' ATP . . . J 4 171.502 158.598 207.29 1 73.87 ? H3' ATP 708 D 1 
HETATM 36 H HO3' ATP . . . J 4 173.518 159.165 206.256 1 73.87 ? HO3' ATP 708 D 1 
HETATM 37 H H2' ATP . . . J 4 170.385 158.161 205.057 1 73.87 ? H2' ATP 708 D 1 
HETATM 38 H HO2' ATP . . . J 4 171.88 159.133 203.585 1 73.87 ? HO2' ATP 708 D 1 
HETATM 39 H H1' ATP . . . J 4 173.098 156.862 204.335 1 73.87 ? H1' ATP 708 D 1 
HETATM 40 H H8 ATP . . . J 4 169.337 155.967 204.124 1 73.87 ? H8 ATP 708 D 1 
HETATM 41 H HN61 ATP . . . J 4 170.541 154.806 198.149 1 73.87 ? HN61 ATP 708 D 1 
HETATM 42 H HN62 ATP . . . J 4 169.295 154.812 199.392 1 73.87 ? HN62 ATP 708 D 1 
HETATM 43 H H2 ATP . . . J 4 174.325 156.186 200.104 1 73.87 ? H2 ATP 708 D 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           213 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           43 
#