data_8T3O
#
_model_server_result.job_id            mLEmsHWwf-nHglbzR7zIFQ 
_model_server_result.datetime_utc      '2024-11-04 22:49:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8t3o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    8T3O 
#
_exptl.entry_id    8T3O 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              364.409 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "3-{4-[(4-fluoro-4'-methyl[1,1'-biphenyl]-2-yl)methoxy]phenyl}propanoic acid" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8T3O 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8T3O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 90 R CYS 111 1_555 A SG CYS 163 R CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf2 E SG CYS 21 N CYS 22 1_555 E SG CYS 95 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf3 E SG CYS 159 N CYS 160 1_555 E SG CYS 229 N CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C23 H21 F O3' 
_chem_comp.formula_weight    364.409 
_chem_comp.id                YN9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "3-{4-[(4-fluoro-4'-methyl[1,1'-biphenyl]-2-yl)methoxy]phenyl}propanoic acid" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C22 C17 YN9 sing 572 n n 
C17 C20 YN9 doub 573 n y 
C17 C21 YN9 sing 574 n y 
C20 C10 YN9 sing 575 n y 
C21 C11 YN9 doub 576 n y 
C10 C3 YN9 doub 577 n y 
C11 C3 YN9 sing 578 n y 
C3 C1 YN9 sing 579 n n 
C7 C1 YN9 doub 580 n y 
C7 C18 YN9 sing 581 n y 
C1 C2 YN9 sing 582 n y 
C18 C19 YN9 doub 583 n y 
C2 C4 YN9 sing 584 n n 
C2 C8 YN9 doub 585 n y 
C19 C8 YN9 sing 586 n y 
C19 F1 YN9 sing 587 n n 
C4 O1 YN9 sing 588 n n 
O1 C9 YN9 sing 589 n n 
C9 C15 YN9 doub 590 n y 
C9 C16 YN9 sing 591 n y 
C15 C13 YN9 sing 592 n y 
C16 C14 YN9 doub 593 n y 
C13 C5 YN9 doub 594 n y 
C14 C5 YN9 sing 595 n y 
C5 C6 YN9 sing 596 n n 
C12 C6 YN9 sing 597 n n 
C12 C23 YN9 sing 598 n n 
O3 C23 YN9 doub 599 n n 
C23 O2 YN9 sing 600 n n 
C6 H1 YN9 sing 601 n n 
C6 H2 YN9 sing 602 n n 
C4 H3 YN9 sing 603 n n 
C4 H4 YN9 sing 604 n n 
O2 H5 YN9 sing 605 n n 
C10 H6 YN9 sing 606 n n 
C11 H7 YN9 sing 607 n n 
C12 H8 YN9 sing 608 n n 
C12 H9 YN9 sing 609 n n 
C13 H10 YN9 sing 610 n n 
C14 H11 YN9 sing 611 n n 
C15 H12 YN9 sing 612 n n 
C16 H13 YN9 sing 613 n n 
C18 H14 YN9 sing 614 n n 
C20 H15 YN9 sing 615 n n 
C21 H16 YN9 sing 616 n n 
C22 H17 YN9 sing 617 n n 
C22 H18 YN9 sing 618 n n 
C22 H19 YN9 sing 619 n n 
C7 H20 YN9 sing 620 n n 
C8 H21 YN9 sing 621 n n 
#
_atom_sites.entry_id                     8T3O 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 YN9 R 1 401 1 YN9 TUG . 
G 7 2Y5 R 1 402 1 2Y5 2Y5 . 
H 8 PLM R 1 403 9 PLM PLM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C6 YN9 . . . F 6 104.787 97.083 141.515 1 97.26 ? C6 YN9 401 R 1 
HETATM 2 C C5 YN9 . . . F 6 104.549 97.316 140.027 1 97.23 ? C5 YN9 401 R 1 
HETATM 3 C C4 YN9 . . . F 6 104.519 99.081 135.412 1 96.44 ? C4 YN9 401 R 1 
HETATM 4 C C3 YN9 . . . F 6 105.149 100.687 133.109 1 92.44 ? C3 YN9 401 R 1 
HETATM 5 O O3 YN9 . . . F 6 106.606 95.275 143.657 1 97.01 ? O3 YN9 401 R 1 
HETATM 6 C C2 YN9 . . . F 6 103.459 99.688 134.493 1 94.21 ? C2 YN9 401 R 1 
HETATM 7 O O2 YN9 . . . F 6 106.9 97.412 143.969 1 96.93 ? O2 YN9 401 R 1 
HETATM 8 C C1 YN9 . . . F 6 103.819 100.459 133.397 1 93.21 ? C1 YN9 401 R 1 
HETATM 9 O O1 YN9 . . . F 6 104.013 97.887 135.93 1 98.79 ? O1 YN9 401 R 1 
HETATM 10 C C10 YN9 . . . F 6 105.784 99.916 132.156 1 93.91 ? C10 YN9 401 R 1 
HETATM 11 C C11 YN9 . . . F 6 105.846 101.683 133.766 1 95.67 ? C11 YN9 401 R 1 
HETATM 12 C C12 YN9 . . . F 6 106.248 96.713 141.75 1 97.39 ? C12 YN9 401 R 1 
HETATM 13 C C13 YN9 . . . F 6 103.54 98.157 139.581 1 93.02 ? C13 YN9 401 R 1 
HETATM 14 C C14 YN9 . . . F 6 105.376 96.684 139.118 1 99.17 ? C14 YN9 401 R 1 
HETATM 15 C C15 YN9 . . . F 6 103.356 98.355 138.22 1 94.63 ? C15 YN9 401 R 1 
HETATM 16 C C16 YN9 . . . F 6 105.19 96.883 137.762 1 100.66 ? C16 YN9 401 R 1 
HETATM 17 C C17 YN9 . . . F 6 107.814 101.135 132.527 1 92.5 ? C17 YN9 401 R 1 
HETATM 18 C C18 YN9 . . . F 6 101.509 100.774 132.865 1 97.94 ? C18 YN9 401 R 1 
HETATM 19 C C19 YN9 . . . F 6 101.151 100.01 133.96 1 98.03 ? C19 YN9 401 R 1 
HETATM 20 C C20 YN9 . . . F 6 107.116 100.142 131.867 1 94.4 ? C20 YN9 401 R 1 
HETATM 21 C C21 YN9 . . . F 6 107.178 101.907 133.478 1 94.16 ? C21 YN9 401 R 1 
HETATM 22 C C22 YN9 . . . F 6 109.284 101.381 132.208 1 96.7 ? C22 YN9 401 R 1 
HETATM 23 C C23 YN9 . . . F 6 106.598 96.453 143.214 1 99.59 ? C23 YN9 401 R 1 
HETATM 24 C C7 YN9 . . . F 6 102.844 100.999 132.581 1 92.3 ? C7 YN9 401 R 1 
HETATM 25 C C8 YN9 . . . F 6 102.125 99.466 134.773 1 93.44 ? C8 YN9 401 R 1 
HETATM 26 C C9 YN9 . . . F 6 104.181 97.711 137.309 1 99.9 ? C9 YN9 401 R 1 
HETATM 27 F F1 YN9 . . . F 6 99.835 99.787 134.238 1 97.83 ? F1 YN9 401 R 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#