data_8T3V # _model_server_result.job_id nfzmWGl4reY2jIwp2jFcgA _model_server_result.datetime_utc '2025-03-05 23:45:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8t3v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":302}' # _entry.id 8T3V # _exptl.entry_id 8T3V _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 328.488 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 21 N CYS 22 1_555 D SG CYS 95 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 D SG CYS 159 N CYS 160 1_555 D SG CYS 229 N CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 E SG CYS 79 R CYS 79 1_555 E SG CYS 170 R CYS 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C22 H32 O2' _chem_comp.formula_weight 328.488 _chem_comp.id HXA _chem_comp.mon_nstd_flag . _chem_comp.name 'DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HXA doub 227 n n C1 O2 HXA sing 228 n n C1 C2 HXA sing 229 n n O2 HO2 HXA sing 230 n n C2 C3 HXA sing 231 n n C2 H21 HXA sing 232 n n C2 H22 HXA sing 233 n n C3 C4 HXA sing 234 n n C3 H31 HXA sing 235 n n C3 H32 HXA sing 236 n n C4 C5 HXA doub 237 z n C4 H4 HXA sing 238 n n C5 C6 HXA sing 239 n n C5 H5 HXA sing 240 n n C6 C7 HXA sing 241 n n C6 H61 HXA sing 242 n n C6 H62 HXA sing 243 n n C7 C8 HXA doub 244 z n C7 H7 HXA sing 245 n n C8 C9 HXA sing 246 n n C8 H8 HXA sing 247 n n C9 C10 HXA sing 248 n n C9 H91 HXA sing 249 n n C9 H92 HXA sing 250 n n C10 C11 HXA doub 251 z n C10 H10 HXA sing 252 n n C11 C12 HXA sing 253 n n C11 H11 HXA sing 254 n n C12 C13 HXA sing 255 n n C12 H121 HXA sing 256 n n C12 H122 HXA sing 257 n n C13 C14 HXA doub 258 z n C13 H13 HXA sing 259 n n C14 C15 HXA sing 260 n n C14 H14 HXA sing 261 n n C15 C16 HXA sing 262 n n C15 H151 HXA sing 263 n n C15 H152 HXA sing 264 n n C16 C17 HXA doub 265 z n C16 H16 HXA sing 266 n n C17 C18 HXA sing 267 n n C17 H17 HXA sing 268 n n C18 C19 HXA sing 269 n n C18 H181 HXA sing 270 n n C18 H182 HXA sing 271 n n C19 C20 HXA doub 272 z n C19 H19 HXA sing 273 n n C20 C21 HXA sing 274 n n C20 H20 HXA sing 275 n n C21 C22 HXA sing 276 n n C21 H211 HXA sing 277 n n C21 H212 HXA sing 278 n n C22 H221 HXA sing 279 n n C22 H222 HXA sing 280 n n C22 H223 HXA sing 281 n n # _atom_sites.entry_id 8T3V _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 CLR R 1 301 302 CLR CLR . G 7 HXA R 1 302 302 HXA HXA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HXA . . . G 7 105.331 119.055 70.648 1 107.66 ? C1 HXA 302 R 1 HETATM 2 O O1 HXA . . . G 7 104.491 119.327 69.77 1 107.66 ? O1 HXA 302 R 1 HETATM 3 O O2 HXA . . . G 7 105.837 117.928 70.78 1 107.66 ? O2 HXA 302 R 1 HETATM 4 C C2 HXA . . . G 7 105.78 120.163 71.586 1 107.66 ? C2 HXA 302 R 1 HETATM 5 C C3 HXA . . . G 7 105.418 119.958 73.06 1 107.66 ? C3 HXA 302 R 1 HETATM 6 C C4 HXA . . . G 7 104.963 121.215 73.734 1 107.66 ? C4 HXA 302 R 1 HETATM 7 C C5 HXA . . . G 7 104.424 121.275 74.938 1 107.66 ? C5 HXA 302 R 1 HETATM 8 C C6 HXA . . . G 7 104.361 122.485 75.806 1 107.66 ? C6 HXA 302 R 1 HETATM 9 C C7 HXA . . . G 7 103.668 122.297 77.116 1 107.66 ? C7 HXA 302 R 1 HETATM 10 C C8 HXA . . . G 7 103.602 123.201 78.065 1 107.66 ? C8 HXA 302 R 1 HETATM 11 C C9 HXA . . . G 7 104.593 124.307 78.255 0 107.66 ? C9 HXA 302 R 1 HETATM 12 C C10 HXA . . . G 7 104.335 125.306 79.338 0 107.66 ? C10 HXA 302 R 1 HETATM 13 C C11 HXA . . . G 7 104.234 125.049 80.624 0 107.66 ? C11 HXA 302 R 1 HETATM 14 C C12 HXA . . . G 7 104.165 126.075 81.712 0 107.66 ? C12 HXA 302 R 1 HETATM 15 C C13 HXA . . . G 7 103.927 125.53 83.086 0 107.66 ? C13 HXA 302 R 1 HETATM 16 C C14 HXA . . . G 7 102.896 125.82 83.851 0 107.66 ? C14 HXA 302 R 1 HETATM 17 C C15 HXA . . . G 7 102.515 125.117 85.117 0 107.66 ? C15 HXA 302 R 1 HETATM 18 C C16 HXA . . . G 7 102.265 123.653 84.938 0 107.66 ? C16 HXA 302 R 1 HETATM 19 C C17 HXA . . . G 7 101.858 122.818 85.87 0 107.66 ? C17 HXA 302 R 1 HETATM 20 C C18 HXA . . . G 7 100.755 123.073 86.849 0 107.66 ? C18 HXA 302 R 1 HETATM 21 C C19 HXA . . . G 7 99.622 122.099 86.738 0 107.66 ? C19 HXA 302 R 1 HETATM 22 C C20 HXA . . . G 7 98.884 121.9 85.662 0 107.66 ? C20 HXA 302 R 1 HETATM 23 C C21 HXA . . . G 7 97.913 120.78 85.448 0 107.66 ? C21 HXA 302 R 1 HETATM 24 C C22 HXA . . . G 7 97.249 120.839 84.118 0 107.66 ? C22 HXA 302 R 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #